Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY27204 | Canola | mitochondrion, nucleus | 97.1 | 96.47 |
CDX72127 | Canola | mitochondrion | 97.42 | 95.57 |
AT3G56580.1 | Thale cress | mitochondrion | 78.71 | 76.25 |
Bra014684.1-P | Field mustard | nucleus | 44.19 | 71.35 |
Bra004589.1-P | Field mustard | nucleus | 50.97 | 64.75 |
Bra000207.1-P | Field mustard | mitochondrion, nucleus | 62.26 | 60.88 |
KRH71659 | Soybean | nucleus | 50.0 | 50.16 |
KRH33121 | Soybean | nucleus | 49.68 | 49.84 |
VIT_08s0040g00590.t01 | Wine grape | nucleus | 50.0 | 49.36 |
Os03t0351800-01 | Rice | nucleus | 44.19 | 48.41 |
EER92269 | Sorghum | nucleus | 43.55 | 47.37 |
GSMUA_AchrUn_... | Banana | nucleus | 39.35 | 47.29 |
TraesCS3D01G432800.1 | Wheat | mitochondrion | 43.23 | 46.37 |
TraesCS3A01G440000.1 | Wheat | mitochondrion | 43.23 | 46.37 |
GSMUA_Achr8P09890_001 | Banana | nucleus | 34.52 | 46.32 |
Zm00001d047476_P001 | Maize | mitochondrion | 43.55 | 46.23 |
TraesCS3B01G474100.1 | Wheat | mitochondrion | 42.9 | 46.18 |
HORVU3Hr1G096110.1 | Barley | mitochondrion | 42.58 | 45.67 |
GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus, plastid | 37.42 | 44.79 |
PGSC0003DMT400058464 | Potato | nucleus | 44.84 | 43.71 |
Solyc01g009000.2.1 | Tomato | plastid | 44.52 | 43.4 |
KRH14643 | Soybean | nucleus | 46.77 | 43.15 |
VIT_06s0009g02350.t01 | Wine grape | mitochondrion | 45.81 | 42.26 |
KRH18631 | Soybean | nucleus | 41.61 | 42.16 |
PGSC0003DMT400079301 | Potato | nucleus | 37.42 | 38.67 |
Solyc08g075910.1.1 | Tomato | nucleus | 37.1 | 38.21 |
KRH73496 | Soybean | mitochondrion | 45.16 | 37.74 |
KRH18634 | Soybean | nucleus | 27.1 | 35.59 |
GSMUA_Achr11P... | Banana | mitochondrion | 33.23 | 34.45 |
Bra001767.1-P | Field mustard | nucleus | 22.9 | 33.18 |
Bra038246.1-P | Field mustard | nucleus | 29.03 | 27.69 |
Bra028173.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 27.42 | 26.15 |
Bra035835.1-P | Field mustard | nucleus | 27.1 | 25.69 |
Bra002823.1-P | Field mustard | nucleus | 28.06 | 24.72 |
Bra030136.1-P | Field mustard | cytosol | 18.39 | 23.55 |
Bra030854.1-P | Field mustard | nucleus | 23.55 | 23.4 |
Bra019109.1-P | Field mustard | nucleus | 24.19 | 23.29 |
Bra005020.1-P | Field mustard | nucleus, plastid | 24.84 | 22.58 |
Bra037109.1-P | Field mustard | nucleus | 24.19 | 22.46 |
Bra037999.1-P | Field mustard | nucleus | 20.97 | 22.41 |
Bra027436.1-P | Field mustard | nucleus | 22.26 | 22.33 |
Bra000143.1-P | Field mustard | nucleus | 26.77 | 22.13 |
Bra026444.1-P | Field mustard | nucleus | 26.13 | 21.83 |
Bra019382.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 26.13 | 21.72 |
Bra002559.1-P | Field mustard | plastid | 27.42 | 21.41 |
Bra020313.1-P | Field mustard | plastid | 26.45 | 21.08 |
Bra006709.1-P | Field mustard | plastid | 25.48 | 20.1 |
Bra037800.1-P | Field mustard | cytosol | 18.39 | 18.87 |
Bra011215.1-P | Field mustard | cytosol | 13.87 | 18.53 |
Bra005970.1-P | Field mustard | cytosol | 14.84 | 15.86 |
Bra014266.1-P | Field mustard | nucleus | 22.26 | 15.65 |
Bra028935.1-P | Field mustard | nucleus | 28.06 | 15.32 |
Bra009323.1-P | Field mustard | cytosol | 17.74 | 14.51 |
Bra008671.1-P | Field mustard | nucleus | 13.23 | 14.29 |
Bra021467.1-P | Field mustard | nucleus | 17.42 | 13.85 |
Bra013006.1-P | Field mustard | nucleus | 17.1 | 12.71 |
Bra023539.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 15.81 | 12.34 |
Protein Annotations
EnsemblPlants:Bra007253.1 | EnsemblPlants:Bra007253.1-P | EnsemblPlantsGene:Bra007253 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 |
InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR44290 | PANTHER:PTHR44290:SF1 | PFAM:PF13639 | PFAM:PF14369 |
PFscan:PS50089 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0002542B92 | UniProt:M4CSR1 |
MapMan:35.1 | : | : | : | : | : |
Description
AT3G56580 (E=9e-120) | zinc finger (C3HC4-type RING finger) family protein
Coordinates
chrA09:+:28211162..28212094
Molecular Weight (calculated)
34359.7 Da
IEP (calculated)
7.784
GRAVY (calculated)
-0.793
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGRNTHWCH RCQRGVYLRG PDSFCTYCGG GFVEEIDVSP FRAHRDLERG PTYDLMEAFS AFMRSRLAER SHDTGRITAS SGGGGGSESF SSIAPFLIFG
101: GQANNTSVEA LLNTSPGGIG ITRGGNVNAG DYFYGPGLEE LIEQLSSGTT HHRGPPPAPK SSIDALPTVK ITQKHLKSSD SHCPVCKEEF ELKSEAKQMP
201: CKHMYHSDCI VPWLVQHNTC PVCRKELPSR GSSSSTERDQ NRGSNRRRNV FSSLWPFRSS SSSSTQNRRD TSNAATVEEG GQYNHHQQLQ HQQQHEQQSH
301: MGYSGWPFDY
101: GQANNTSVEA LLNTSPGGIG ITRGGNVNAG DYFYGPGLEE LIEQLSSGTT HHRGPPPAPK SSIDALPTVK ITQKHLKSSD SHCPVCKEEF ELKSEAKQMP
201: CKHMYHSDCI VPWLVQHNTC PVCRKELPSR GSSSSTERDQ NRGSNRRRNV FSSLWPFRSS SSSSTQNRRD TSNAATVEEG GQYNHHQQLQ HQQQHEQQSH
301: MGYSGWPFDY
001: MSSIRNTHWC HRCQRAVWLR ARDAVCSYCG GGFVEEIDIG PSRAHRDVER DPTFDLMEAF SAFMRSRLAE RSYDREISGR LGSAGSESFS NLAPLLIFGG
101: QAPFRLAGGD NSSVEAFVNG AAPGIGIARG TNAGDYFFGP GLEELIEQLS SGTHHRGPPP APKSSIDALP TIKITQKHLK SSDSHCPVCK DEFELKSEAK
201: QMPCHHIYHS DCIVPWLVQH NSCPVCRKEL PSRGSSSSTQ SSQNRSTNGR ENSRRRNIFS NLWPFRSSSS SSTQNRRDTN NTATAEEGHY HHHQQQQQQH
301: QHQHQQQQSH MGYSGWPFDY
101: QAPFRLAGGD NSSVEAFVNG AAPGIGIARG TNAGDYFFGP GLEELIEQLS SGTHHRGPPP APKSSIDALP TIKITQKHLK SSDSHCPVCK DEFELKSEAK
201: QMPCHHIYHS DCIVPWLVQH NSCPVCRKEL PSRGSSSSTQ SSQNRSTNGR ENSRRRNIFS NLWPFRSSSS SSTQNRRDTN NTATAEEGHY HHHQQQQQQH
301: QHQHQQQQSH MGYSGWPFDY
Arabidopsis Description
RZF1E3 ubiquitin-protein ligase RZF1 [Source:UniProtKB/Swiss-Prot;Acc:Q94AK4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.