Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007253.1-P | Field mustard | mitochondrion, nucleus | 95.57 | 97.42 |
| CDY27204 | Canola | mitochondrion, nucleus | 95.57 | 96.79 |
| AT3G56580.1 | Thale cress | mitochondrion | 77.53 | 76.56 |
| CDX75998 | Canola | nucleus | 43.99 | 72.4 |
| CDX94901 | Canola | cytosol | 63.92 | 64.33 |
| CDY23878 | Canola | mitochondrion, nucleus | 61.08 | 63.28 |
| CDX79968 | Canola | mitochondrion, nucleus | 58.86 | 62.63 |
| CDY35437 | Canola | mitochondrion, nucleus | 60.76 | 60.57 |
| CDY22483 | Canola | mitochondrion | 57.28 | 59.74 |
| KRH71659 | Soybean | nucleus | 48.73 | 49.84 |
| KRH33121 | Soybean | nucleus | 48.42 | 49.51 |
| VIT_08s0040g00590.t01 | Wine grape | nucleus | 49.05 | 49.36 |
| Os03t0351800-01 | Rice | nucleus | 43.04 | 48.06 |
| EER92269 | Sorghum | nucleus | 42.72 | 47.37 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.61 | 47.29 |
| GSMUA_Achr8P09890_001 | Banana | nucleus | 34.18 | 46.75 |
| TraesCS3A01G440000.1 | Wheat | mitochondrion | 42.41 | 46.37 |
| TraesCS3D01G432800.1 | Wheat | mitochondrion | 42.41 | 46.37 |
| Zm00001d047476_P001 | Maize | mitochondrion | 42.72 | 46.23 |
| TraesCS3B01G474100.1 | Wheat | mitochondrion | 42.09 | 46.18 |
| HORVU3Hr1G096110.1 | Barley | mitochondrion | 41.77 | 45.67 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus, plastid | 37.03 | 45.17 |
| PGSC0003DMT400058464 | Potato | nucleus | 43.99 | 43.71 |
| Solyc01g009000.2.1 | Tomato | plastid | 43.67 | 43.4 |
| KRH14643 | Soybean | nucleus | 45.89 | 43.15 |
| VIT_06s0009g02350.t01 | Wine grape | mitochondrion | 44.94 | 42.26 |
| KRH18631 | Soybean | nucleus | 40.82 | 42.16 |
| PGSC0003DMT400079301 | Potato | nucleus | 36.71 | 38.67 |
| Solyc08g075910.1.1 | Tomato | nucleus | 36.39 | 38.21 |
| KRH73496 | Soybean | mitochondrion | 44.3 | 37.74 |
| KRH18634 | Soybean | nucleus | 26.58 | 35.59 |
| GSMUA_Achr11P... | Banana | mitochondrion | 32.59 | 34.45 |
| CDY36069 | Canola | cytosol | 23.42 | 34.1 |
| CDX82271 | Canola | cytosol | 22.78 | 33.8 |
| CDY72364 | Canola | cytosol | 23.42 | 33.33 |
| CDY46577 | Canola | nucleus | 26.58 | 28.87 |
| CDY22790 | Canola | nucleus | 23.42 | 27.41 |
| CDY33437 | Canola | cytosol | 27.85 | 27.16 |
| CDY24592 | Canola | nucleus | 27.53 | 27.1 |
| CDX74533 | Canola | cytosol | 25.0 | 27.05 |
| CDY25360 | Canola | cytosol, nucleus, plastid | 26.58 | 26.01 |
| CDX92768 | Canola | nucleus | 24.37 | 24.92 |
| CDY10554 | Canola | cytosol | 23.73 | 24.59 |
| CDY01669 | Canola | plastid | 25.0 | 24.46 |
| CDY32791 | Canola | nucleus | 27.22 | 24.43 |
| CDY68603 | Canola | cytosol | 18.67 | 24.38 |
| CDX94665 | Canola | nucleus | 18.04 | 24.26 |
| CDY42507 | Canola | cytosol | 25.95 | 24.19 |
| CDY26096 | Canola | nucleus | 22.47 | 24.15 |
| CDY32333 | Canola | cytosol | 17.72 | 23.83 |
| CDX92770 | Canola | nucleus | 24.37 | 23.77 |
| CDX80258 | Canola | plastid | 26.27 | 23.38 |
| CDY20473 | Canola | nucleus, plastid | 24.68 | 23.35 |
| CDY42740 | Canola | nucleus | 23.73 | 23.29 |
| CDX74839 | Canola | cytosol, plastid | 23.42 | 22.84 |
| CDY56080 | Canola | cytosol | 20.25 | 22.54 |
| CDX89343 | Canola | cytosol, mitochondrion | 25.0 | 22.44 |
| CDY50031 | Canola | cytosol | 20.57 | 22.41 |
| CDY08249 | Canola | cytosol | 23.73 | 22.39 |
| CDY56022 | Canola | nucleus | 22.15 | 22.36 |
| CDY53450 | Canola | cytosol | 22.78 | 22.36 |
| CDY43991 | Canola | nucleus | 21.84 | 22.33 |
| CDY24951 | Canola | nucleus | 26.27 | 22.13 |
| CDY61251 | Canola | cytosol | 25.0 | 21.88 |
| CDY07641 | Canola | nucleus | 25.63 | 21.66 |
| CDX94342 | Canola | mitochondrion, nucleus | 25.63 | 20.93 |
| CDX99105 | Canola | cytosol, plastid | 21.2 | 20.68 |
| CDY56081 | Canola | nucleus | 15.51 | 20.5 |
| CDX81263 | Canola | cytosol, peroxisome, plastid | 18.67 | 20.34 |
| CDY33046 | Canola | plastid | 21.52 | 19.88 |
| CDX88709 | Canola | cytosol, plastid | 24.68 | 19.8 |
| CDY48679 | Canola | cytosol, plastid | 20.89 | 19.76 |
| CDY18690 | Canola | cytosol, peroxisome, plastid | 18.67 | 19.73 |
| CDY28208 | Canola | cytosol | 13.61 | 18.53 |
| CDY01221 | Canola | cytosol | 12.03 | 17.43 |
| CDY69134 | Canola | cytosol | 14.87 | 16.15 |
| CDY58938 | Canola | nucleus | 22.47 | 16.1 |
| CDY03622 | Canola | nucleus | 22.47 | 15.92 |
| CDX78323 | Canola | cytosol | 14.24 | 15.62 |
| CDX69973 | Canola | cytosol | 17.41 | 15.28 |
| CDY21513 | Canola | cytosol | 16.77 | 14.89 |
| CDX69496 | Canola | cytosol | 13.29 | 14.58 |
| CDX85531 | Canola | cytosol | 15.51 | 14.29 |
| CDX90972 | Canola | cytosol | 14.87 | 14.03 |
| CDY34721 | Canola | cytosol | 17.09 | 13.85 |
| CDY34722 | Canola | cytosol | 17.09 | 13.85 |
| CDY02194 | Canola | peroxisome | 17.09 | 13.57 |
| CDY51628 | Canola | peroxisome | 17.41 | 13.55 |
| CDY26465 | Canola | cytosol | 13.92 | 12.98 |
| CDY11934 | Canola | nucleus | 26.27 | 12.73 |
| CDY23599 | Canola | golgi, mitochondrion | 21.52 | 11.17 |
Protein Annotations
| EnsemblPlants:CDX72127 | EnsemblPlantsGene:GSBRNA2T00155944001 | Gene3D:3.30.40.10 | GO:A0A078C5F0 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR44290 | PANTHER:PTHR44290:SF1 | PFAM:PF13639 | PFAM:PF14369 |
| PFscan:PS50089 | ProteinID:CDX72127 | ProteinID:CDX72127.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI0004EDFD43 | MapMan:35.1 | : | : | : | : |
Description
BnaC08g27470D
Coordinates
chrLK031795:-:2571095..2572045
Molecular Weight (calculated)
34895.4 Da
IEP (calculated)
7.793
GRAVY (calculated)
-0.780
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGRNTHWCH RCQRGVYLRG PDSLCTYCGG GFVEEIDVSP FRAHRDLERG PTYDLMEAFS AFMRSRLAER SHDRELTGRI TASSGGGGGG GGSESFSSIA
101: PFLIFGGQAN NTSVEALLNT SPGGIGITRG GNVNAGDYFY GPGLEELIEQ LSSGTTHHRG PPPAAKSSID ALPTVKITQK HLKSSDSHCP VCKEEFELKS
201: EVKQMPCKHM YHSDCIVPWL VQHNTCPVCR KELPSRGSSS STERDQNRGS NRRRNLFSSL WPFRSSSSSS TQNRRDTSNT ATAEEGGQYS HHHQLQHQQQ
301: HEQQSHMGYS GWPFDY
101: PFLIFGGQAN NTSVEALLNT SPGGIGITRG GNVNAGDYFY GPGLEELIEQ LSSGTTHHRG PPPAAKSSID ALPTVKITQK HLKSSDSHCP VCKEEFELKS
201: EVKQMPCKHM YHSDCIVPWL VQHNTCPVCR KELPSRGSSS STERDQNRGS NRRRNLFSSL WPFRSSSSSS TQNRRDTSNT ATAEEGGQYS HHHQLQHQQQ
301: HEQQSHMGYS GWPFDY
001: MSSIRNTHWC HRCQRAVWLR ARDAVCSYCG GGFVEEIDIG PSRAHRDVER DPTFDLMEAF SAFMRSRLAE RSYDREISGR LGSAGSESFS NLAPLLIFGG
101: QAPFRLAGGD NSSVEAFVNG AAPGIGIARG TNAGDYFFGP GLEELIEQLS SGTHHRGPPP APKSSIDALP TIKITQKHLK SSDSHCPVCK DEFELKSEAK
201: QMPCHHIYHS DCIVPWLVQH NSCPVCRKEL PSRGSSSSTQ SSQNRSTNGR ENSRRRNIFS NLWPFRSSSS SSTQNRRDTN NTATAEEGHY HHHQQQQQQH
301: QHQHQQQQSH MGYSGWPFDY
101: QAPFRLAGGD NSSVEAFVNG AAPGIGIARG TNAGDYFFGP GLEELIEQLS SGTHHRGPPP APKSSIDALP TIKITQKHLK SSDSHCPVCK DEFELKSEAK
201: QMPCHHIYHS DCIVPWLVQH NSCPVCRKEL PSRGSSSSTQ SSQNRSTNGR ENSRRRNIFS NLWPFRSSSS SSTQNRRDTN NTATAEEGHY HHHQQQQQQH
301: QHQHQQQQSH MGYSGWPFDY
Arabidopsis Description
RZF1E3 ubiquitin-protein ligase RZF1 [Source:UniProtKB/Swiss-Prot;Acc:Q94AK4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.