Factsheet for HORVU1Hr1G068950.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 1
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
TargetP:	secretory
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G305300.1	Wheat	nucleus	81.87	95.18
TraesCS1B01G316300.1	Wheat	nucleus	81.35	94.58
Os05t0488800-01	Rice	nucleus	65.8	78.64
Zm00001d038528_P001	Maize	cytosol	62.44	72.37
Zm00001d010635_P001	Maize	nucleus	57.25	70.83
KXG22238	Sorghum	plastid	70.21	69.67
GSMUA_Achr11P...	Banana	nucleus	31.61	45.19
CDY46577	Canola	nucleus	30.57	40.55
CDY10554	Canola	cytosol	31.09	39.34
KRG97316	Soybean	nucleus	34.72	38.95
CDY26096	Canola	nucleus	29.27	38.44
CDY56022	Canola	nucleus	30.31	37.38
Bra027436.1-P	Field mustard	nucleus	29.79	37.22
CDY43991	Canola	nucleus	29.79	37.22
VIT_06s0004g00120.t01	Wine grape	nucleus	35.23	36.96
Bra030854.1-P	Field mustard	nucleus	29.79	36.86
AT3G13430.2	Thale cress	nucleus	29.79	36.51
AT1G55530.2	Thale cress	nucleus	32.64	35.9
PGSC0003DMT400046527	Potato	nucleus	33.16	35.56
Bra037109.1-P	Field mustard	nucleus	30.57	35.33
CDX89343	Canola	cytosol, mitochondrion	32.12	35.23
CDY08249	Canola	cytosol	30.57	35.22
CDY32791	Canola	nucleus	31.61	34.66
Bra002823.1-P	Field mustard	nucleus	31.61	34.66
AT5G56340.1	Thale cress	nucleus	35.49	34.6
CDX92768	Canola	nucleus	27.46	34.3
CDY56080	Canola	cytosol	25.13	34.15
CDY42740	Canola	nucleus	27.46	32.92
Bra026444.1-P	Field mustard	nucleus	31.61	32.88
AT4G26400.1	Thale cress	nucleus	30.31	32.87
CDX92770	Canola	nucleus	27.46	32.72
Bra019109.1-P	Field mustard	nucleus	27.2	32.61
HORVU5Hr1G111530.1	Barley	nucleus	33.16	32.16
CDX94342	Canola	mitochondrion, nucleus	32.12	32.04
Solyc01g050040.2.1	Tomato	nucleus	24.09	31.85
CDY50031	Canola	cytosol	23.83	31.72
Bra037999.1-P	Field mustard	nucleus	23.83	31.72
HORVU4Hr1G051610.2	Barley	cytosol	27.98	31.3
CDY28208	Canola	cytosol	18.65	31.03
Bra011215.1-P	Field mustard	cytosol	18.65	31.03
CDY56081	Canola	nucleus	18.91	30.54
HORVU3Hr1G039220.1	Barley	cytosol	26.94	27.59
KRH70139	Soybean	nucleus	22.02	26.65
HORVU7Hr1G000850.1	Barley	cytosol, mitochondrion, nucleus	24.09	26.05
HORVU3Hr1G096110.1	Barley	mitochondrion	19.17	25.61
KRH08483	Soybean	cytosol, nucleus, plastid	21.24	25.47
Bra028935.1-P	Field mustard	nucleus	36.27	24.65
HORVU1Hr1G043220.1	Barley	cytosol, mitochondrion, plastid, vacuole	22.54	23.71
HORVU7Hr1G055010.1	Barley	cytosol	13.47	23.53
CDY11934	Canola	nucleus	36.79	21.78
CDY23599	Canola	golgi, mitochondrion	31.87	20.2
HORVU1Hr1G004330.14	Barley	cytosol	19.95	19.2
HORVU6Hr1G080320.2	Barley	cytosol, mitochondrion	16.32	18.92
HORVU4Hr1G060130.1	Barley	cytosol	17.1	18.75
HORVU0Hr1G019650.1	Barley	mitochondrion	15.29	18.61
HORVU6Hr1G072430.1	Barley	cytosol	17.36	18.41
HORVU3Hr1G041030.1	Barley	mitochondrion	16.84	16.8
HORVU6Hr1G034800.1	Barley	cytosol, nucleus	15.54	16.22
HORVU3Hr1G115000.7	Barley	mitochondrion	16.32	16.07
HORVU7Hr1G092570.1	Barley	cytosol	14.77	14.88

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.1	UniProt:A0A287G2Y9	EMBL:AK354481	EMBL:AK355356	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:HORVU1Hr1G068950	EnsemblPlants:HORVU1Hr1G068950.2	InterPro:IPR001841	InterPro:IPR013083
PFAM:PF13639	PFAM:PF14369	PFscan:PS50089	PANTHER:PTHR44576	PANTHER:PTHR44576:SF3	SMART:SM00184
SUPFAM:SSF57850	TMHMM:TMhelix	UniParc:UPI000B4880C2	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

No Description!

Coordinates

chrchr1H:-:482728911..482730463

Molecular Weight (calculated)

43010.9 Da

IEP (calculated)

4.202

GRAVY (calculated)

-0.517

Length

386 amino acids

Sequence
(BLAST)

001: SCSQRIKRLE STLYLMQDLA MFFALFLFLM LASCLTFHRV LRLIDGRICD MAEAAITRYW CHECQQAVEE AMVEELKCPL CDGGFVEEMI GEHFEALASQ
101: LSEQGPTQWD PLDNPFEQPG SPGDSDDEDN SDIGREFEGF IRRHRRASAL RRVLDSIHDD LRDDRERDNS VLISAFNQAL ALQGAALDPD EDRGDHGNSN
201: NDDGLLEEYV LGAGLSLLLQ HLAENDPSRY GTPPAKKEAV EALPTVKIEE VVSCSVCLDD LDLGSQAKQL PCEHKFHSPC ILPWLELHSS CPVCRFELPS
301: DETKDLSETS NVDRIESSHE EVRADGPAND GEDSNTNDRE DSNRPWALVP WFNGLFSTPE PQTVRATLTD QQLPPASGTN PNAGHS

Best Arabidopsis Sequence Match ( AT1G55530.2 )
(BLAST)

001: MEEAVVTRYW CHMCSQTVNP VMEAEIKCPF CQSGFVEEME DDDDHDSSDP ADVRANNSLW APILMELMND PVRRRRNQSV ESVEDNQNEV QTENNEDDGE
101: NDLDWQLQEI LRRRRRHSAA VLQLLQGIRA GLSVESESTG NGGNNPGRVI LINTSNQTIT VQNSADMDSV PAGSLGDYFI GPGFEMLLQR LAENDPNRYG
201: TPPAKKEAVE ALATVKIEET LQCSVCLDDF EIGTEAKLMP CTHKFHSDCL LPWLELHSSC PVCRYQLPAD EAKTDSVTTT SDNNGSSSAS ATTSHGAENS
301: DGNRRQEEEE EEEEEEEEEN ENNDGSGFSI PWPFSTLFSS SQDSNAPTDS S

Arabidopsis Description

At1g55530/T5A14_7 [Source:UniProtKB/TrEMBL;Acc:Q9ZVU8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.