Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 4
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G169600.1 | Wheat | cytosol, mitochondrion | 88.96 | 88.4 |
| TraesCS7D01G170800.1 | Wheat | mitochondrion | 88.33 | 87.5 |
| TraesCS7B01G074800.1 | Wheat | mitochondrion | 87.7 | 86.34 |
| EER89401 | Sorghum | mitochondrion, nucleus | 60.25 | 57.19 |
| Zm00001d037167_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 60.25 | 56.18 |
| HORVU6Hr1G080320.2 | Barley | cytosol, mitochondrion | 52.37 | 49.85 |
| GSMUA_Achr7P13060_001 | Banana | mitochondrion | 35.33 | 45.53 |
| CDX74533 | Canola | cytosol | 31.55 | 34.25 |
| VIT_18s0001g03270.t01 | Wine grape | nucleus | 35.65 | 33.93 |
| VIT_12s0034g01400.t01 | Wine grape | endoplasmic reticulum, mitochondrion, nucleus, plastid | 27.76 | 33.72 |
| CDY01669 | Canola | plastid | 32.49 | 31.89 |
| Bra028173.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 31.55 | 30.77 |
| AT1G60360.1 | Thale cress | nucleus | 31.55 | 30.58 |
| KRH64713 | Soybean | nucleus | 33.75 | 30.4 |
| PGSC0003DMT400002370 | Potato | cytosol | 30.91 | 30.34 |
| Solyc11g012950.1.1 | Tomato | cytosol | 31.86 | 30.33 |
| HORVU3Hr1G096110.1 | Barley | mitochondrion | 24.29 | 26.64 |
| KRH10441 | Soybean | mitochondrion | 26.5 | 26.17 |
| KRH44018 | Soybean | mitochondrion | 25.24 | 25.24 |
| PGSC0003DMT400061055 | Potato | extracellular | 23.66 | 25.17 |
| Solyc01g104260.2.1 | Tomato | mitochondrion | 23.66 | 25.0 |
| HORVU7Hr1G055010.1 | Barley | cytosol | 16.4 | 23.53 |
| HORVU1Hr1G043220.1 | Barley | cytosol, mitochondrion, plastid, vacuole | 27.13 | 23.43 |
| HORVU7Hr1G000850.1 | Barley | cytosol, mitochondrion, nucleus | 23.97 | 21.29 |
| HORVU1Hr1G004330.14 | Barley | cytosol | 26.5 | 20.95 |
| HORVU4Hr1G060130.1 | Barley | cytosol | 23.03 | 20.74 |
| VIT_12s0034g01390.t01 | Wine grape | mitochondrion | 29.34 | 20.62 |
| HORVU3Hr1G039220.1 | Barley | cytosol | 23.34 | 19.63 |
| HORVU3Hr1G115000.7 | Barley | mitochondrion | 23.66 | 19.13 |
| HORVU4Hr1G051610.2 | Barley | cytosol | 19.24 | 17.68 |
| HORVU3Hr1G041030.1 | Barley | mitochondrion | 21.45 | 17.57 |
| HORVU5Hr1G111530.1 | Barley | nucleus | 19.56 | 15.58 |
| HORVU1Hr1G068950.2 | Barley | golgi | 18.61 | 15.29 |
| HORVU6Hr1G072430.1 | Barley | cytosol | 17.03 | 14.84 |
| HORVU6Hr1G034800.1 | Barley | cytosol, nucleus | 16.4 | 14.05 |
| HORVU7Hr1G092570.1 | Barley | cytosol | 15.14 | 12.53 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G019650.1 | EnsemblPlantsGene:HORVU0Hr1G019650 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR44290 | PANTHER:PTHR44290:SF4 | PFAM:PF13639 | PFAM:PF14369 | PFscan:PS50089 |
| SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI000296968C | UniProt:M0VIG9 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchrUn:-:103679580..103680969
Molecular Weight (calculated)
34572.8 Da
IEP (calculated)
5.596
GRAVY (calculated)
-0.422
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEPGARPRQ RRRWRVYWCY VCSRALRTVS SPTSDVFCPR CLGRFLHEIE LPVPREPVHR PTERLFHPAP LFPYEGAPRH WVIYRGEDDN AADTDTPGPR
101: RRRVPSPPPA PGTHGGIDGA EAGPQATGID PAGFFTGPNL NALIEGLTQN DRPGPPPAPA SAIDSLPMVQ VSPAHMADGS QCPVCKEEFE LGETARELPC
201: KHAYHSDCIV PWLELHNSCP VCRQELPLPA GEFPDGAAAG DGGDERVPPW QQLAGWGPLA WLLMLGDPEV NGWENGPGRR GREADADDGG GNVSRRATIL
301: QSFVLVAACF FFVSFLV
101: RRRVPSPPPA PGTHGGIDGA EAGPQATGID PAGFFTGPNL NALIEGLTQN DRPGPPPAPA SAIDSLPMVQ VSPAHMADGS QCPVCKEEFE LGETARELPC
201: KHAYHSDCIV PWLELHNSCP VCRQELPLPA GEFPDGAAAG DGGDERVPPW QQLAGWGPLA WLLMLGDPEV NGWENGPGRR GREADADDGG GNVSRRATIL
301: QSFVLVAACF FFVSFLV
001: MSLSQPITRT DSAPNGAFRT FGLYWCYHCD RMVRIASSNP SEIACPRCLR QFVVEIETRQ RPRFTFNHAT PPFDASPEAR LLEALSLMFE PATIGRFGAD
101: PFLRARSRNI LEPESRPRPQ HRRRHSLDNV NNGGLPLPRR TYVILRPNNP TSPLGNIIAP PNQAPPRHVN SHDYFTGASS LEQLIEQLTQ DDRPGPPPAS
201: EPTINSLPSV KITPQHLTND MSQCTVCMEE FIVGGDATEL PCKHIYHKDC IVPWLRLNNS CPICRRDLPL VNTVAESRER SNPIRQDMPE RRRPRWMQLG
301: NIWPFRARYQ RVSPEETANQ NPRDNRS
101: PFLRARSRNI LEPESRPRPQ HRRRHSLDNV NNGGLPLPRR TYVILRPNNP TSPLGNIIAP PNQAPPRHVN SHDYFTGASS LEQLIEQLTQ DDRPGPPPAS
201: EPTINSLPSV KITPQHLTND MSQCTVCMEE FIVGGDATEL PCKHIYHKDC IVPWLRLNNS CPICRRDLPL VNTVAESRER SNPIRQDMPE RRRPRWMQLG
301: NIWPFRARYQ RVSPEETANQ NPRDNRS
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:O80757]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.