Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P02460_001 | Banana | nucleus | 34.76 | 60.87 |
| TraesCS5D01G146400.1 | Wheat | nucleus | 28.83 | 41.14 |
| TraesCS5A01G145800.1 | Wheat | nucleus | 28.83 | 40.98 |
| Os11t0119200-01 | Rice | nucleus | 27.72 | 40.94 |
| TraesCS5B01G144700.1 | Wheat | nucleus | 28.69 | 40.78 |
| Os12t0118700-01 | Rice | nucleus | 27.59 | 40.08 |
| Bra014266.1-P | Field mustard | nucleus | 21.52 | 35.37 |
| CDY58938 | Canola | nucleus | 21.52 | 35.37 |
| CDY03622 | Canola | nucleus | 21.52 | 34.98 |
| AT5G01980.1 | Thale cress | nucleus | 23.72 | 34.89 |
| PGSC0003DMT400071362 | Potato | nucleus | 22.76 | 34.88 |
| KRH40635 | Soybean | nucleus, plastid | 26.48 | 34.85 |
| KRH00522 | Soybean | plastid | 26.62 | 34.53 |
| VIT_08s0056g00320.t01 | Wine grape | mitochondrion | 28.0 | 34.41 |
| CDY01221 | Canola | cytosol | 8.97 | 29.82 |
| GSMUA_Achr5P19380_001 | Banana | plastid | 7.72 | 29.32 |
| GSMUA_Achr8P09890_001 | Banana | nucleus | 8.14 | 25.54 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus, plastid | 8.83 | 24.71 |
| GSMUA_Achr9P05060_001 | Banana | nucleus | 6.07 | 23.66 |
| GSMUA_AchrUn_... | Banana | nucleus | 8.41 | 23.64 |
| GSMUA_Achr7P15040_001 | Banana | mitochondrion | 10.21 | 23.42 |
| GSMUA_Achr5P07070_001 | Banana | nucleus | 10.48 | 23.1 |
| GSMUA_Achr10P... | Banana | mitochondrion | 10.34 | 22.26 |
| GSMUA_Achr2P03780_001 | Banana | cytosol | 10.76 | 22.22 |
| GSMUA_Achr6P08590_001 | Banana | nucleus | 8.83 | 21.84 |
| GSMUA_Achr7P13060_001 | Banana | mitochondrion | 7.31 | 21.54 |
| GSMUA_Achr11P... | Banana | mitochondrion | 8.83 | 21.4 |
| GSMUA_Achr10P... | Banana | mitochondrion | 11.86 | 21.39 |
| GSMUA_Achr10P... | Banana | nucleus | 8.28 | 21.28 |
| GSMUA_Achr2P19140_001 | Banana | mitochondrion | 10.21 | 20.44 |
| GSMUA_Achr11P... | Banana | nucleus | 7.59 | 20.37 |
| GSMUA_AchrUn_... | Banana | mitochondrion, plastid | 9.79 | 20.23 |
| GSMUA_Achr6P23590_001 | Banana | mitochondrion, nucleus | 9.52 | 20.06 |
| GSMUA_Achr7P18340_001 | Banana | nucleus | 8.0 | 19.33 |
| GSMUA_Achr10P... | Banana | nucleus | 8.0 | 19.14 |
| GSMUA_Achr5P07680_001 | Banana | nucleus | 7.59 | 18.46 |
| GSMUA_Achr8P24510_001 | Banana | cytosol | 8.97 | 16.41 |
| GSMUA_Achr3P06300_001 | Banana | cytosol | 9.24 | 12.84 |
Protein Annotations
| MapMan:1.1.8.1.2.7 | Gene3D:3.30.40.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016655 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr11G19930_001 |
| EnsemblPlants:GSMUA_Achr11P19930_001 | EnsemblPlants:GSMUA_Achr11T19930_001 | InterPro:IPR001841 | InterPro:IPR013083 | UniProt:M0RTS3 | InterPro:NAD(P)H-quinone_OxRdtase_su_N |
| PFAM:PF11909 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR35515 | PANTHER:PTHR35515:SF1 | SMART:SM00184 |
| SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI000296F6FB | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
NAD(P)H-quinone oxidoreductase subunit N [Source:GMGC_GENE;Acc:GSMUA_Achr11G19930_001]
Coordinates
chr11:-:20960635..20965989
Molecular Weight (calculated)
81182.6 Da
IEP (calculated)
5.589
GRAVY (calculated)
-0.560
Length
725 amino acids
Sequence
(BLAST)
(BLAST)
001: MIELRCGNFW RNYIVQNLQM DRESHYSFQS SDHLPQDNSS FHHSNQPSVR CLLCRRVFSL EAELNDGFEA IHICRECKIM VLDDNHTNLN VRDIRDTPVT
101: VRRHASYYAS RSRSWRRQSA LSDNDSDALD QSESALGETD SNVSFGGYGG DSDASLDRHS LIDRQVLLQH ENESYVSTDT DIDPMHAGLD QWNSDGEDDE
201: DGEWVEASWV ELSMFADPQQ QFQDANGSPS SNGMGRAQDG AWFQLRIGET PAEYSDVFAD FEESDIRPTY VGNPGDYVDA RGFEELLEQL AETDSSRRGA
301: PPAAASFVRT LPSVVVSKDH QRKGTQICAV CKDPLLVDTE AKRLPCRHLY HPSCILPWLN VRNSCPVCRY ELPTDDPEYE EAKRNLNQTE RHVSQPTDTA
401: VETYDTSSEL ENEEASDISI ANAEHRSLDH AANRSGEGSR GGWLFLAAAP IVSIVGIVLI FWLRKPSGDV RIQGGAREQH LHRSQSNSSP ADRNRRWWSI
501: FYKTSPLRSA GEAEHVLVGR GMSSSATAFH LTAPLTSATG GRRSRRAAVG GVRCGLADLI GGDLVRPDLG RWLQDVEKHK ALAVYSPHEG GYEGRYLNRL
601: RYQGYRFLDL TARGLGDPES TLTKIHPVCP PHLGKQPIAR WYFPPEVDYR LSLLPPDAKG LVLWVIEAKV LSKAELQFLA LLPTLRPKVK VIAECGNWRK
701: FVWRPLREIA GLPSAEGSTA SVQPE
101: VRRHASYYAS RSRSWRRQSA LSDNDSDALD QSESALGETD SNVSFGGYGG DSDASLDRHS LIDRQVLLQH ENESYVSTDT DIDPMHAGLD QWNSDGEDDE
201: DGEWVEASWV ELSMFADPQQ QFQDANGSPS SNGMGRAQDG AWFQLRIGET PAEYSDVFAD FEESDIRPTY VGNPGDYVDA RGFEELLEQL AETDSSRRGA
301: PPAAASFVRT LPSVVVSKDH QRKGTQICAV CKDPLLVDTE AKRLPCRHLY HPSCILPWLN VRNSCPVCRY ELPTDDPEYE EAKRNLNQTE RHVSQPTDTA
401: VETYDTSSEL ENEEASDISI ANAEHRSLDH AANRSGEGSR GGWLFLAAAP IVSIVGIVLI FWLRKPSGDV RIQGGAREQH LHRSQSNSSP ADRNRRWWSI
501: FYKTSPLRSA GEAEHVLVGR GMSSSATAFH LTAPLTSATG GRRSRRAAVG GVRCGLADLI GGDLVRPDLG RWLQDVEKHK ALAVYSPHEG GYEGRYLNRL
601: RYQGYRFLDL TARGLGDPES TLTKIHPVCP PHLGKQPIAR WYFPPEVDYR LSLLPPDAKG LVLWVIEAKV LSKAELQFLA LLPTLRPKVK VIAECGNWRK
701: FVWRPLREIA GLPSAEGSTA SVQPE
001: MGSRAICIQR VAPPCFEASQ VKKIKTVGSF LVNTRSKRRR STGVKCSSIA DYIGGDLVKP DIGQWLQDVE EHKAIAIYAP HEGGYEGRYL NRLKMQGYYF
101: LDISARGLGD PETTLLKNYP VCPAHLGKQP IARWYYPPEV DYRLAALPPS AKGLVVWVLE AKVLSKSELQ FLALLPSLRP NVRVIAECGN WRKFVWKPLA
201: EIANLAAQE
101: LDISARGLGD PETTLLKNYP VCPAHLGKQP IARWYYPPEV DYRLAALPPS AKGLVVWVLE AKVLSKSELQ FLALLPSLRP NVRVIAECGN WRKFVWKPLA
201: EIANLAAQE
Arabidopsis Description
ndhNNdhN [Source:UniProtKB/TrEMBL;Acc:A0A178UG88]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.