Factsheet for Os11t0119200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0118700-01	Rice	nucleus	92.26	90.78
TraesCS5A01G145800.1	Wheat	nucleus	68.64	66.08
TraesCS5B01G144700.1	Wheat	nucleus	68.43	65.88
TraesCS5D01G146400.1	Wheat	nucleus	67.62	65.35
Os06t0633500-01	Rice	cytosol, nucleus	9.78	38.71
GSMUA_Achr4P02460_001	Banana	nucleus	32.18	38.16
CDY03622	Canola	nucleus	29.74	32.74
Bra014266.1-P	Field mustard	nucleus	29.12	32.43
CDY58938	Canola	nucleus	28.92	32.2
AT5G01980.1	Thale cress	nucleus	32.18	32.05
PGSC0003DMT400071362	Potato	nucleus	28.92	30.02
VIT_08s0056g00320.t01	Wine grape	mitochondrion	36.05	30.0
KRH40635	Soybean	nucleus, plastid	33.6	29.95
KRH00522	Soybean	plastid	33.6	29.52
GSMUA_Achr11P...	Banana	cytosol	40.94	27.72
CDY01221	Canola	cytosol	12.02	27.06
Os03t0351800-01	Rice	nucleus	13.65	23.67
Os03t0271600-01	Rice	plastid	12.22	21.51
Os02t0727700-01	Rice	cytosol, nucleus, plastid	13.24	20.9
Os05t0488800-01	Rice	nucleus	13.24	20.12
Os10t0487400-01	Rice	mitochondrion, nucleus, plastid, vacuole	14.26	18.92
Os05t0495000-00	Rice	mitochondrion	11.0	18.88
Os08t0487500-01	Rice	plastid	10.39	18.82
Os06t0101300-01	Rice	nucleus	12.63	18.34
Os05t0110000-01	Rice	mitochondrion	12.42	18.32
Os01t0802000-01	Rice	nucleus	12.02	17.93
Os03t0324900-01	Rice	cytosol	11.61	17.81
Os03t0812200-01	Rice	nucleus	12.83	17.07
Os01t0972000-01	Rice	nucleus	11.2	16.47
Os02t0767600-00	Rice	mitochondrion	10.79	16.16
Os01t0276600-01	Rice	nucleus	10.18	15.2
Os02t0191500-01	Rice	nucleus	9.37	12.27

Protein Annotations

EntrezGene:107275252	Gene3D:3.30.40.10	MapMan:35.1	ProteinID:ABA91189.1	EMBL:AK103124	ProteinID:BAH95050.1
ProteinID:BAT12439.1	GO:GO:0000209	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506
GO:GO:0005575	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016705	GO:GO:0016740	GO:GO:0019538	GO:GO:0020037
GO:GO:0043161	GO:GO:0055114	GO:GO:0061630	InterPro:IPR001841	InterPro:IPR013083	EnsemblPlantsGene:Os11g0119200
EnsemblPlants:Os11t0119200-01	PFAM:PF13639	PFscan:PS50089	PANTHER:PTHR44679	UniProt:Q2RBA3	SMART:SM00184
SUPFAM:SSF57850	TMHMM:TMhelix	UniParc:UPI00006825A6	RefSeq:XP_015617090.1	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

P-450 714C3Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0119200-01)

Coordinates

chr11:+:856524..860980

Molecular Weight (calculated)

55402.5 Da

IEP (calculated)

4.379

GRAVY (calculated)

-0.654

Length

491 amino acids

Sequence
(BLAST)

001: MSDHQFAGQP DVQCLVCTRP FTLDAQVTDT FEALAICRDC KATVLNDVER DEITSTSHHT RRRRQRSRTA SIDSLEDAFS QEFSQLIDLA RRQGRETDID
101: SSSVLPQHAS YNATPSHSQR WHASDDESDG LNYVDSVFGE IESTISFGDY GADSDTSIEE HSVSARRRIS IQLDNGSYMN TDTDIDPMNA RLDQWDSDDQ
201: EDVEESGFDE TINTMTQHQQ QSHDIQLSGL SEDESEDGVW NWSVAVRQRA NVTNLLEDME GPEMRTTFVG NPDDYVDARQ FEMLLEQFAE DNSSRRGAPP
301: AATSFIENLP SVIISTSHQI NDDVICPVCK DPIPTRARAK QLPCMHLYHS SCILPWFSSR NTCPVCRYEL PTDDAEYERS KQATTNVRDI QVVEENSDEQ
401: EVQVTRQMAV GAIEETNTSE HNVRVDEQPS SARRRSGWLF IAAAPVVSLI GFALVLCFTN PARSGRRQLY CRSPSATEVH VGTKKSWWSM F

Best Arabidopsis Sequence Match ( AT5G01980.1 )
(BLAST)

001: MESQGPSNGH PMDISSNSIP SSACNLCGRV VQSASDDLEI FSLCVDCKFL LLEDFGTPAP PLARRQTIRR RRMRRRRRTT RHDSSESVGV GDLSSQQFTH
101: LISIARQSLS TVQASEDLRD DLRTSSHTTP SGSTRWRLFS ESESDDFDNF GETESNASFS LYRFPHADND TISFSAYGGE SDASTDRHAD IFVQPDDRSD
201: IDFDTDIDPM RAGLNQWNSD EEDREWEEGA GPSGVAGTRY RNYLASPSES YSSMTRFDSP ELERSFRQRI IERRHSLSRN IFTGLEDLDF SPYAANVGDY
301: LDERGFDELL EQLAESDNSR RGAPPASVSC VRNLPRVIIA EEHVMKGLVC AICKELFSLR NETTQLPCLH LYHAHCIVPW LSARNSCPLC RYELPTDDKD
401: YEEGKRNVLD VSEDSSSSDD GTESGEEEYV ERGESESGVS RVSRGRWLFL AAAPVVSLVG VVLAMWLSSP HRRGIAISHS QRENRTRRWL PFF

Arabidopsis Description

At5g01980 [Source:UniProtKB/TrEMBL;Acc:Q9LZN3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.