Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 6
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0802000-01 | Rice | nucleus | 49.3 | 42.86 |
| Os03t0351800-01 | Rice | nucleus | 41.26 | 41.7 |
| Os06t0633500-01 | Rice | cytosol, nucleus | 13.29 | 30.65 |
| Os03t0271600-01 | Rice | plastid | 23.08 | 23.66 |
| Os03t0324900-01 | Rice | cytosol | 25.52 | 22.81 |
| Os10t0487400-01 | Rice | mitochondrion, nucleus, plastid, vacuole | 27.27 | 21.08 |
| Os02t0767600-00 | Rice | mitochondrion | 23.43 | 20.43 |
| Os01t0972000-01 | Rice | nucleus | 23.43 | 20.06 |
| Os06t0101300-01 | Rice | nucleus | 23.43 | 19.82 |
| Os05t0488800-01 | Rice | nucleus | 22.38 | 19.81 |
| Os05t0110000-01 | Rice | mitochondrion | 22.03 | 18.92 |
| Os01t0276600-01 | Rice | nucleus | 21.33 | 18.54 |
| Os03t0812200-01 | Rice | nucleus | 23.08 | 17.89 |
| Os08t0487500-01 | Rice | plastid | 15.73 | 16.61 |
| Os02t0727700-01 | Rice | cytosol, nucleus, plastid | 16.43 | 15.11 |
| Os02t0191500-01 | Rice | nucleus | 16.43 | 12.53 |
| Os11t0119200-01 | Rice | nucleus | 18.88 | 11.0 |
| Os12t0118700-01 | Rice | nucleus | 18.88 | 10.82 |
Protein Annotations
| EntrezGene:107277686 | Gene3D:3.30.40.10 | MapMan:35.1 | UniProt:A0A0P0WNX5 | ProteinID:BAS94699.1 | InterPro:IPR001841 |
| InterPro:IPR013083 | EnsemblPlantsGene:Os05g0495000 | EnsemblPlants:Os05t0495000-00 | PFAM:PF13639 | PFAM:PF14369 | PFscan:PS50089 |
| PANTHER:PTHR44290 | PANTHER:PTHR44290:SF2 | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0000F130B1 | RefSeq:XP_015638710.1 |
| RefSeq:XP_015638711.1 | RefSeq:XP_015638712.1 | RefSeq:XP_015638713.1 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
Hypothetical conserved gene. (Os05t0495000-00)
Coordinates
chr5:-:24309770..24311123
Molecular Weight (calculated)
31312.8 Da
IEP (calculated)
7.191
GRAVY (calculated)
-0.559
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNRATHWCY VCRRPVRIRG GSQDVTCPSC DDGFVQEMSE MGRRTASSTL GFVGPDAGDE FLLRRSPVME AMSTLMRHAA TVGGDEREVD VHDEHGGGDG
101: VPAHARLGVL FRGGPRVGVE RRGGYYRAGL EALFEQLQNQ LGSSRQGPPP APPSAIDAMP VVTISRRHLR AEPRCPVCQD EFQLGAEARE MPCAHLYHAD
201: CIVPWLVHHN SCPVCRHSLP PPATTASGGG ASGGERQVRR GSRSFLWPFG PTSSTSHSHE CEDGSSDTTV YEDPGKVRYI RWHYNH
101: VPAHARLGVL FRGGPRVGVE RRGGYYRAGL EALFEQLQNQ LGSSRQGPPP APPSAIDAMP VVTISRRHLR AEPRCPVCQD EFQLGAEARE MPCAHLYHAD
201: CIVPWLVHHN SCPVCRHSLP PPATTASGGG ASGGERQVRR GSRSFLWPFG PTSSTSHSHE CEDGSSDTTV YEDPGKVRYI RWHYNH
001: MSSSRNTHWC HRCQRAVRLH GQEPVCFYCG GGFVEELDMA QASPFDMFRS HRGVVERDQT FDLMDAFSVF MRNRLAERSH DREIRGRTIS SGPENFPGLA
101: PLLIFGGQVP YRLTGDNAVE ALFNGGSPGI GITRGNTGDY FFGPGLEELF EQLSAGTTRR GPPPAPRSAI DALPTIKIAQ RHLRSSDSNC PVCKDEFELG
201: SEAKQMPCNH IYHSDCIVPW LVQHNSCPVC RQELPSASGP SSSQNRTTPT RNYRSSSSSS SSNSRENGNE RRNPFSSFWP FRSSGSSSSS TQNRGGTRNS
301: DTSDENHNYH QQQHQQSYMG YSGWPFDY
101: PLLIFGGQVP YRLTGDNAVE ALFNGGSPGI GITRGNTGDY FFGPGLEELF EQLSAGTTRR GPPPAPRSAI DALPTIKIAQ RHLRSSDSNC PVCKDEFELG
201: SEAKQMPCNH IYHSDCIVPW LVQHNSCPVC RQELPSASGP SSSQNRTTPT RNYRSSSSSS SSNSRENGNE RRNPFSSFWP FRSSGSSSSS TQNRGGTRNS
301: DTSDENHNYH QQQHQQSYMG YSGWPFDY
Arabidopsis Description
RHC1AProbable E3 ubiquitin-protein ligase RHC1A [Source:UniProtKB/Swiss-Prot;Acc:O22197]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.