Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G176700.1 | Wheat | cytosol | 95.37 | 88.79 |
| HORVU4Hr1G051610.2 | Barley | cytosol | 94.14 | 88.41 |
| TraesCS4B01G174800.1 | Wheat | cytosol | 94.75 | 87.71 |
| Os03t0324900-01 | Rice | cytosol | 65.12 | 65.94 |
| Zm00001d047560_P001 | Maize | cytosol | 60.49 | 63.43 |
| KXG39475 | Sorghum | cytosol | 60.8 | 61.37 |
| GSMUA_Achr9P05060_001 | Banana | nucleus | 21.3 | 37.1 |
| GSMUA_Achr7P18340_001 | Banana | nucleus | 34.26 | 37.0 |
| GSMUA_Achr6P08590_001 | Banana | nucleus | 31.79 | 35.15 |
| GSMUA_Achr5P07680_001 | Banana | nucleus | 31.79 | 34.56 |
| GSMUA_Achr10P... | Banana | nucleus | 31.17 | 33.33 |
| TraesCS3A01G189200.1 | Wheat | cytosol | 37.65 | 32.53 |
| TraesCS3A01G440000.1 | Wheat | mitochondrion | 24.07 | 26.99 |
| TraesCS5A01G467700.1 | Wheat | nucleus | 33.64 | 26.98 |
| TraesCS4A01G095800.1 | Wheat | cytosol | 21.91 | 25.36 |
| TraesCS4A01G499200.1 | Wheat | cytosol, mitochondrion | 25.93 | 25.07 |
| TraesCS7A01G247700.1 | Wheat | cytosol, plastid | 20.06 | 24.16 |
| TraesCS1A01G162400.1 | Wheat | cytosol, mitochondrion, plastid, vacuole | 26.23 | 22.97 |
| TraesCS1A01G029800.1 | Wheat | cytosol | 23.77 | 19.3 |
| TraesCS7A01G169600.1 | Wheat | cytosol, mitochondrion | 18.83 | 19.12 |
| TraesCS6A01G288800.1 | Wheat | cytosol, plastid | 16.67 | 17.59 |
| TraesCS6A01G330700.1 | Wheat | mitochondrion | 17.28 | 17.18 |
| TraesCS3A01G330900.1 | Wheat | mitochondrion | 20.68 | 16.63 |
| TraesCS7A01G391700.1 | Wheat | cytosol | 16.05 | 15.71 |
| TraesCS5A01G145800.1 | Wheat | nucleus | 19.14 | 12.16 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G129800.1 | EnsemblPlantsGene:TraesCS4A01G129800 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR44576 | PANTHER:PTHR44576:SF2 | PFAM:PF13639 | PFAM:PF14369 | PFscan:PS50089 |
| SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | TIGR:cd16669 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr4A:+:170156487..170158459
Molecular Weight (calculated)
33935.8 Da
IEP (calculated)
4.447
GRAVY (calculated)
-0.306
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEPGATSR YYCHMCSVIV RPELGVEEVK CPHCRSGFVE EMADGRRSSN AVGDRGTTAT GAGPDDAGAR SELAGPPWPP ILMDLLGVSY GLDGGDLAGL
101: ARRQYRHLAF LQLLNALQEG DADADGDAPD PGLERLVLVS PADAHAMLMP ELGASNGAAA AARGPGLTLG ELILGPGLDL LLEYLAETDP SRQGTLPAKM
201: EAVAALPTVK VSEAATCPVC LDEFAAGGEA KEMPCKHRFH DVCLLPWLEA NSSCPVCRYQ LPTDEATEPA GNGAEETADE SSGNAGRDVE GDSDGGSSGR
301: RRWLARPFGR LFSRRSNGSS SSSR
101: ARRQYRHLAF LQLLNALQEG DADADGDAPD PGLERLVLVS PADAHAMLMP ELGASNGAAA AARGPGLTLG ELILGPGLDL LLEYLAETDP SRQGTLPAKM
201: EAVAALPTVK VSEAATCPVC LDEFAAGGEA KEMPCKHRFH DVCLLPWLEA NSSCPVCRYQ LPTDEATEPA GNGAEETADE SSGNAGRDVE GDSDGGSSGR
301: RRWLARPFGR LFSRRSNGSS SSSR
001: MEEAVVTRYW CHMCSQTVNP VMEAEIKCPF CQSGFVEEME DDDDHDSSDP ADVRANNSLW APILMELMND PVRRRRNQSV ESVEDNQNEV QTENNEDDGE
101: NDLDWQLQEI LRRRRRHSAA VLQLLQGIRA GLSVESESTG NGGNNPGRVI LINTSNQTIT VQNSADMDSV PAGSLGDYFI GPGFEMLLQR LAENDPNRYG
201: TPPAKKEAVE ALATVKIEET LQCSVCLDDF EIGTEAKLMP CTHKFHSDCL LPWLELHSSC PVCRYQLPAD EAKTDSVTTT SDNNGSSSAS ATTSHGAENS
301: DGNRRQEEEE EEEEEEEEEN ENNDGSGFSI PWPFSTLFSS SQDSNAPTDS S
101: NDLDWQLQEI LRRRRRHSAA VLQLLQGIRA GLSVESESTG NGGNNPGRVI LINTSNQTIT VQNSADMDSV PAGSLGDYFI GPGFEMLLQR LAENDPNRYG
201: TPPAKKEAVE ALATVKIEET LQCSVCLDDF EIGTEAKLMP CTHKFHSDCL LPWLELHSSC PVCRYQLPAD EAKTDSVTTT SDNNGSSSAS ATTSHGAENS
301: DGNRRQEEEE EEEEEEEEEN ENNDGSGFSI PWPFSTLFSS SQDSNAPTDS S
Arabidopsis Description
At1g55530/T5A14_7 [Source:UniProtKB/TrEMBL;Acc:Q9ZVU8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.