Factsheet for Bra016584.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96749	Canola	cytosol, peroxisome, plasma membrane	96.01	99.41
Bra025944.1-P	Field mustard	cytosol, peroxisome, plasma membrane	92.58	96.01
AT1G17840.1	Thale cress	cytosol, peroxisome, plasma membrane	96.15	95.87
VIT_16s0039g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	83.88	83.4
KRH38814	Soybean	cytosol, peroxisome, plasma membrane	82.17	81.47
KRH09311	Soybean	cytosol, peroxisome, plasma membrane	82.03	81.44
PGSC0003DMT400039496	Potato	cytosol, peroxisome, plasma membrane	79.74	79.07
Solyc03g019760.2.1	Tomato	nucleus	79.74	78.73
GSMUA_Achr5P19820_001	Banana	cytosol, peroxisome, plasma membrane	74.47	78.26
GSMUA_Achr5P10800_001	Banana	cytosol, peroxisome, plasma membrane	77.18	78.07
TraesCS1B01G181300.2	Wheat	cytosol, peroxisome, plasma membrane	75.75	74.16
TraesCS1D01G161500.2	Wheat	cytosol, peroxisome, plasma membrane	75.46	73.88
Os10t0494300-01	Rice	extracellular, plasma membrane	75.75	73.44
Os04t0528300-01	Rice	plasma membrane	73.89	72.86
KXG38261	Sorghum	cytosol, peroxisome, plasma membrane	74.18	72.83
Zm00001d002871_P001	Maize	cytosol, peroxisome, plasma membrane	74.89	72.82
Zm00001d013960_P001	Maize	cytosol, peroxisome, plasma membrane	73.04	72.11
TraesCSU01G020100.1	Wheat	plasma membrane	73.61	72.07
TraesCS2A01G374100.1	Wheat	plasma membrane	73.61	71.87
Zm00001d032601_P002	Maize	cytosol, peroxisome, plasma membrane	72.33	68.89
TraesCS1A01G164500.1	Wheat	cytosol	66.48	67.93
HORVU2Hr1G090960.2	Barley	cytosol	73.04	67.72
OQU82009	Sorghum	mitochondrion	74.47	66.92
TraesCS2D01G370400.2	Wheat	plastid	73.47	66.37
TraesCS1D01G150800.1	Wheat	cytosol, peroxisome, plasma membrane	65.34	63.61
Bra030437.1-P	Field mustard	nucleus, peroxisome, plasma membrane	51.07	51.73
Bra031249.1-P	Field mustard	peroxisome	50.78	51.52
Bra018911.1-P	Field mustard	plastid	44.22	49.21
Bra011981.1-P	Field mustard	plastid	33.81	32.38
Bra034385.1-P	Field mustard	plastid	30.67	31.2
Bra038121.1-P	Field mustard	plasma membrane	24.39	16.22
Bra005224.1-P	Field mustard	plasma membrane	23.82	16.18
Bra039668.1-P	Field mustard	plasma membrane	24.11	15.56
Bra039669.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.54	15.21
Bra028945.1-P	Field mustard	plasma membrane	23.4	14.3

Protein Annotations

MapMan:21.9.4.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra016584	EnsemblPlants:Bra016584.1	EnsemblPlants:Bra016584.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	UniProt:M4DJA6	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF271	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00025454CF	SEG:seg	:	:

Description

AT1G17840 (E=0.0) WBC11, ABCG11, DSO, COF1, ATWBC11 | WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11); ATPase, coupled to transmembrane movement of substances / fatty acid transporter

Coordinates

chrA08:-:19153430..19156338

Molecular Weight (calculated)

78340.0 Da

IEP (calculated)

9.052

GRAVY (calculated)

0.124

Length

701 amino acids

Sequence
(BLAST)

001: MEIEASRQQT TVPVPATGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EVLTGYAEPG TLTALMGPSG SGKSTMLDAL
101: SSRLAANAFL SGTVLLNGHK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSDKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASEA YEATGFPCPA LRNPSDHFLR
301: CVNSDFDKVR ATLKGSMKLR FEASDDPLEK ITTTEAIRVL VDYYHTSDYY YTTKAKVEEI SQYKGTILDS GGSQASFLLQ TYTLTKRSFI NMSRDFGYYW
401: LRLLIYILVT FCIGTIYWKV GTSYSAILAR GSCASFVFGF VTFMSIGGFP SFVEDMKVFQ RERLNGHYGV AAFVIANTLA ATPFLIIITF ISGTICYFMV
501: GLHPGFTHYL FFVLCLYASV TVVESLMMAI ASIVPNFLMG IIIGAGIQGI FMLVSGFFRL PNDIPKIFWR YPMSYISFHF WALQGQYQND LRGLMFDSQG
601: SAFKIPGEYV LENVFQINLH RSKWINLSVI LSMIIIYRII FFIMIKTNED VTPWVRGYVA RRRMKQKNGT QNTTVAPDGL TQSPSLRNYI ATRTNGGARR
701: W

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.