Factsheet for Bra039669.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24098	Canola	plasma membrane	88.86	94.37
Bra039668.1-P	Field mustard	plasma membrane	76.48	79.65
Bra038121.1-P	Field mustard	plasma membrane	71.79	77.04
AT1G53390.1	Thale cress	plasma membrane	71.53	72.95
OQU76478	Sorghum	plasma membrane	20.25	60.26
KRG91932	Soybean	plasma membrane	56.59	57.4
KRH34842	Soybean	plasma membrane	56.5	57.26
VIT_13s0019g04600.t01	Wine grape	plasma membrane	56.06	56.61
KRH71703	Soybean	plasma membrane	55.08	55.97
Bra005224.1-P	Field mustard	plasma membrane	50.31	55.14
GSMUA_Achr4P12050_001	Banana	mitochondrion, plasma membrane	51.02	54.8
Solyc04g025170.2.1	Tomato	mitochondrion	49.16	54.51
HORVU6Hr1G091510.2	Barley	mitochondrion	50.31	54.5
GSMUA_Achr4P05530_001	Banana	plasma membrane	48.36	54.43
Zm00001d046068_P001	Maize	plasma membrane	49.69	54.04
GSMUA_Achr8P14250_001	Banana	plasma membrane	47.75	53.52
TraesCSU01G106900.1	Wheat	plasma membrane	49.16	52.4
GSMUA_Achr11P...	Banana	plasma membrane	46.33	52.14
Os06t0731200-01	Rice	plasma membrane	45.8	52.06
HORVU7Hr1G122580.37	Barley	endoplasmic reticulum, vacuole	40.32	52.0
TraesCS7B01G488900.1	Wheat	plasma membrane	48.63	51.84
Os11t0416900-01	Rice	plasma membrane	50.04	51.41
KXG31382	Sorghum	plasma membrane	49.69	50.91
Zm00001d018500_P002	Maize	plasma membrane	49.43	50.27
TraesCS6B01G434900.1	Wheat	plasma membrane	50.13	50.18
Os04t0194500-01	Rice	plasma membrane	46.15	49.01
Bra028945.1-P	Field mustard	plasma membrane	49.6	48.91
TraesCS6D01G380300.1	Wheat	plasma membrane	50.84	47.96
Zm00001d004335_P001	Maize	plasma membrane	45.98	47.53
TraesCS2A01G049700.2	Wheat	plasma membrane	45.0	47.13
TraesCS2B01G060900.1	Wheat	plasma membrane	45.0	47.0
TraesCS2D01G048800.1	Wheat	plasma membrane	44.92	46.95
KXG25878	Sorghum	plasma membrane	45.09	46.53
Zm00001d025031_P001	Maize	plasma membrane	45.09	46.32
TraesCS6A01G395000.2	Wheat	plasma membrane, plastid	50.93	46.27
Bra016584.1-P	Field mustard	cytosol, peroxisome, plasma membrane	15.21	24.54
Bra025944.1-P	Field mustard	cytosol, peroxisome, plasma membrane	14.59	24.41
Bra031249.1-P	Field mustard	peroxisome	14.32	23.44
Bra030437.1-P	Field mustard	nucleus, peroxisome, plasma membrane	14.32	23.41
Bra018911.1-P	Field mustard	plastid	12.73	22.86
Bra011981.1-P	Field mustard	plastid	12.47	19.26
Bra034385.1-P	Field mustard	plastid	11.58	19.01

Protein Annotations

Gene3D:1.20.225.20	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
EnsemblPlantsGene:Bra039669	EnsemblPlants:Bra039669.1	EnsemblPlants:Bra039669.1-P	InterPro:DC-UbP/UBTD2_N	InterPro:DC-UbP/UBTD2_N_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0043130	InterPro:IPR003439
InterPro:IPR038169	UniProt:M4FEZ7	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF16455	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF304	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI000253E7F1	SEG:seg	:	:	:	:

Description

AT1G53390 (E=0.0) | ATPase, coupled to transmembrane movement of substances

Coordinates

chrA06:-:615072..622158

Molecular Weight (calculated)

126024.0 Da

IEP (calculated)

8.620

GRAVY (calculated)

-0.106

Length

1131 amino acids

Sequence
(BLAST)

0001: MGCAGSTQSQ AEGAVKRIRK PEPWKHTQPI SKAELVKMRE EFWDTAPHYG GTKDLWDALR AAAEADISLA QAIVDSAGVI VQNNDLTTCY DERGAKYELP
0101: KLLILKMSVN RRNWLKHGYN LRLVVLVLWL VCYVGYGQFE DTNDFNNPAF TQMVYHSLYN ITAALNQELA TKAKFCVKDL TADWDKAFNF SANLDFLRSC
0201: FNKTEGDFVS RICTAAEMKF YSDEFLLKTD NPGYLKPKPN RNCNLTSWVP GCEPGWACSR DHLTEQDDLP ERTSNCMPCC EGFFCPNGLT CMIPCPRGSY
0301: CPLATLNETT GLCDPHYCRM GSTSKEPCFK LTSCNSNSAN LHAFWILVIC GVVTILLIIY NCSDQILTTR ERRQAKSREA AVKKAKANQR WKVARTAAKK
0401: HVTEISEQIS QTLSGKRTKK DGETHKMLDR VDSSSSPASS SSAVQPSFEI EDDAAGGSNK RPSGKRGKGP RIKNSQSQIL KYAYNQIEKE KAMELENSDL
0501: TFSGIVNMAT YSEMKRRTLL ELSFQDLTLT LKSNGKHLLR CVTGTMKPGR ITAVMGPSGA GKTSLLSALA GKAVGCNLSG LLLINGKQLS IHSFKKIIGF
0601: VPQDDIVHGN LTVEENIWFH ARCRLPAGQS KAEKVLVVER VIDSLGLQGV RSSLVGTVEK RGISGGQRKR VNVGLEMAME PSILFLDEPT SGLDSASSQL
0701: LLKALKHEAL EGVNICMVVH QPSYTLFKTF NDLVLLAKGG LTVYHGPVEN VEEYFSGLGI IVPERINPPD YYIDVLEGIV TNLNSDVSIK ELPQRWMLHE
0801: GFSVPLDMRK NDNYSAEPTF VRELLGDVTS NFRLRGDKIR HNFLKTRDLS YRRTPSMWLQ YKYFLGRIAK QRMREAKLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYT YTIIAVSLLC KIAALRSFSL DKVHYWRESA AGMSSLASFL AKDTIDCFNT LVKPLVYLSM FYFFTNPRST FLDHYIVLVC LVYCVTGIAY
1001: ALAIFLQPGS AQLFSVLLPV VLTLVATQSN DSKAMKTIAD LCYPKWALQA FVIRNAEKYS GVWMITRCGA LMKGGYDINE WNLCIMILLL IGVATRMIAF
1101: VGMVILQKSE YGVWMITRCG SLMKSGYDIN E

Best Arabidopsis Sequence Match ( AT1G53390.1 )
(BLAST)

0001: MNFNTSLVIM LLNLKMSVDR RNWLKHGCNL RLVILVLWLV CYVSNGQTIG DTSDFNNPAV LPLVTQMVYR SLSNSTAALN RELGIRAKFC VKDPDADWNR
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK

Arabidopsis Description

ABCG24ABC transporter G family member 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAG3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.