Factsheet for Zm00001d025031_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 3
endoplasmic reticulum 2
extracellular 1
golgi 1
plasma membrane 3
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25878	Sorghum	plasma membrane	91.19	91.61
Zm00001d004335_P001	Maize	plasma membrane	88.56	89.12
Os04t0194500-01	Rice	plasma membrane	77.2	79.81
TraesCS2D01G048800.1	Wheat	plasma membrane	75.39	76.71
TraesCS2A01G049700.2	Wheat	plasma membrane	74.66	76.11
TraesCS2B01G060900.1	Wheat	plasma membrane	74.84	76.08
Zm00001d032855_P002	Maize	plasma membrane	48.05	59.91
GSMUA_Achr8P14250_001	Banana	plasma membrane	53.95	58.87
GSMUA_Achr11P...	Banana	plasma membrane	51.41	56.32
Zm00001d046068_P001	Maize	plasma membrane	51.86	54.9
Zm00001d018500_P002	Maize	plasma membrane	53.77	53.24
VIT_13s0019g04600.t01	Wine grape	plasma membrane	53.22	52.32
KRH71703	Soybean	plasma membrane	52.86	52.29
CDY25855	Canola	plasma membrane	48.96	51.98
Bra038121.1-P	Field mustard	plasma membrane	49.05	51.23
KRG91932	Soybean	plasma membrane	51.86	51.21
KRH34842	Soybean	plasma membrane	51.5	50.81
CDY51880	Canola	plasma membrane	48.59	50.76
AT1G53390.1	Thale cress	plasma membrane	50.95	50.59
CDY62076	Canola	plasma membrane	49.86	50.55
Bra039668.1-P	Field mustard	plasma membrane	49.86	50.55
Solyc04g025170.2.1	Tomato	mitochondrion	46.78	50.49
CDY24100	Canola	plasma membrane	49.77	50.46
CDY62072	Canola	endoplasmic reticulum, golgi, plasma membrane	48.77	50.42
CDY24098	Canola	plasma membrane	48.59	50.23
Bra039669.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.32	45.09
Zm00001d013960_P001	Maize	cytosol, peroxisome, plasma membrane	15.44	23.94
Zm00001d032601_P002	Maize	cytosol, peroxisome, plasma membrane	15.53	23.23
Zm00001d002871_P001	Maize	cytosol, peroxisome, plasma membrane	15.17	23.16
Zm00001d010426_P001	Maize	plastid	14.17	22.61
Zm00001d048621_P001	Maize	plastid	14.35	21.94
Zm00001d020811_P001	Maize	nucleus, peroxisome, plasma membrane, plastid	14.26	21.33
Zm00001d019398_P001	Maize	plastid	13.35	21.21
Zm00001d034918_P003	Maize	cytosol, nucleus, plasma membrane, plastid	11.99	12.24

Protein Annotations

EntrezGene:100194100	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A1D6J485	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	ProteinID:AQK42793.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF217	SMART:SM00382	SUPFAM:SSF52540	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000843B85E
EnsemblPlantsGene:Zm00001d025031	EnsemblPlants:Zm00001d025031_P001	EnsemblPlants:Zm00001d025031_T001	SEG:seg	:	:

Description

ABC transporter G family member 24

Coordinates

chr10:-:100543845..100549338

Molecular Weight (calculated)

123069.0 Da

IEP (calculated)

8.724

GRAVY (calculated)

-0.176

Length

1101 amino acids

Sequence
(BLAST)

0001: MRDARAPQFQ RRGQGGVGVV LLPLMLLLAG TASGQQQIQP PPVPPADLPD VERRLNNLTD HVATTISDKF RFCVADPKED WNEAFNYTSD LSFVDRCLTE
0101: TQGDLPQRLC GPDEVKFYFS SLYDRDGDKN INLKTNINCN MSSWGKGCDA GWACATDPVP DRPSNRGSND IPLRTSSCQA CCEGFFCPRG LTCMLPCPLG
0201: SYCPRATANH TTGLCDPYKY QIAPNSTDSC GGADMWADIQ STEEIFCPAG YYCPSTTRKD NCSRHYCRLG STAEEKCIIK ASCEENAENE HIAILGACIV
0301: VIPLAWFCNF SNGALCLLLL VIYNCSDKFL SIRERRKARS RENAIRLARQ QLKAQEGWKA AKQFARRHVS GMQGHLSRTF SRRRSFRQQV DADKSSHRVQ
0401: EAPLMGQVQM QEMSDSAVFA SESANEITEA MPSVIVDVSD GEVVATNENP APKGKHRSTH TQVFKYAYGE IEKEKFQQRQ DNKNLTFTGV IAMVKDQQKE
0501: ITRPLLKVEF RDLTLMLGKK KLLRSINGEL RPGRVTAVMG PSGAGKTTFL NAVTGKVNGY KMTGSVLVNG KNLNIRSYKK VIGFVPQDDI VHGNLTVEEN
0601: LWFSAKCRLS ASMKHRDKVL LVERVIDSLD LQGIRNSLVG TVEKRGISGG QRKRVNVGIE MVMEPSLLIL DEPTSGLDSS SSQLLLRALR HEALQGVNVC
0701: AVVHQPSYTL YNMFDDLILL AKGGLMVYNG PVKTVEEYFT ALGIHVPDRV NPPDHYIDIL EGIVKPDSSA IKAKHLPVHW MLHNGYEVPS DMQDDVKEIG
0801: EQAPQFRSSS STSGSPSPHC LPIRNAFAEE RDRLEQRLSK PKDLSSRKTP GIFMQYKYYL GRVTKQRLRE ARLLMVDFLI LGLAGICLGT IAKLSDKTFG
0901: MPGYIYTIIA VSLLCKIAAL RSFSLERLQY FRERESGMSS LAYFLARDTI DHFSTVVKPI IYLSMFYYFN NPRSTIADNY IVLLALVYCV TGIGYTFAIC
1001: FSPGSAQLCS ALIPVVLTLL STQKSTPTLI RRLCYSKWAL EGFIIVNAKK YPGVWLITRC GLLFQSQFDI HNYKLCILIL FMYGLFFRMV AFAAMILLKK
1101: R

Best Arabidopsis Sequence Match ( AT1G53390.1 )
(BLAST)

0001: MNFNTSLVIM LLNLKMSVDR RNWLKHGCNL RLVILVLWLV CYVSNGQTIG DTSDFNNPAV LPLVTQMVYR SLSNSTAALN RELGIRAKFC VKDPDADWNR
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK

Arabidopsis Description

ABCG24ABC transporter G family member 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAG3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.