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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039668.1-P Field mustard plasma membrane 99.36 99.36
CDY62076 Canola plasma membrane 98.53 98.53
CDY25855 Canola plasma membrane 84.81 88.81
CDY51880 Canola plasma membrane 85.91 88.52
CDY62072 Canola endoplasmic reticulum, golgi, plasma membrane 84.81 86.48
CDY24098 Canola plasma membrane 83.43 85.07
AT1G53390.1 Thale cress plasma membrane 85.45 83.68
KRG91932 Soybean plasma membrane 65.56 63.86
VIT_13s0019g04600.t01 Wine grape plasma membrane 65.47 63.48
KRH34842 Soybean plasma membrane 65.1 63.35
KRH71703 Soybean plasma membrane 64.18 62.62
OQU76478 Sorghum plasma membrane 21.55 61.58
CDX71030 Canola plasma membrane 53.78 61.15
Solyc04g025170.2.1 Tomato mitochondrion 56.26 59.9
GSMUA_Achr4P12050_001 Banana mitochondrion, plasma membrane 57.46 59.26
GSMUA_Achr4P05530_001 Banana plasma membrane 54.79 59.2
HORVU6Hr1G091510.2 Barley mitochondrion 56.35 58.62
GSMUA_Achr8P14250_001 Banana plasma membrane 53.41 57.48
CDY11955 Canola plasma membrane 57.37 57.26
Os06t0731200-01 Rice plasma membrane 52.3 57.09
CDX91328 Canola plasma membrane 56.45 56.71
CDX74994 Canola plasma membrane 56.45 56.71
TraesCSU01G106900.1 Wheat plasma membrane 55.34 56.64
GSMUA_Achr11P... Banana plasma membrane 52.03 56.22
TraesCS7B01G488900.1 Wheat plasma membrane 54.7 55.98
CDY36779 Canola plasma membrane 55.06 55.94
Os11t0416900-01 Rice plasma membrane 56.45 55.68
Zm00001d046068_P001 Maize plasma membrane 52.95 55.29
KXG31382 Sorghum plasma membrane 55.43 54.53
HORVU7Hr1G122580.37 Barley endoplasmic reticulum, vacuole 43.92 54.39
TraesCS6B01G434900.1 Wheat plasma membrane 56.08 53.89
Zm00001d018500_P002 Maize plasma membrane 54.97 53.69
Os04t0194500-01 Rice plasma membrane 51.93 52.96
CDY70653 Canola extracellular, golgi, vacuole 17.04 52.26
Zm00001d004335_P001 Maize plasma membrane 51.66 51.28
TraesCS6D01G380300.1 Wheat plasma membrane 56.35 51.04
TraesCS2B01G060900.1 Wheat plasma membrane 50.46 50.6
TraesCS2A01G049700.2 Wheat plasma membrane 50.28 50.56
TraesCS2D01G048800.1 Wheat plasma membrane 50.37 50.55
KXG25878 Sorghum plasma membrane 50.92 50.46
Zm00001d025031_P001 Maize plasma membrane 50.46 49.77
TraesCS6A01G395000.2 Wheat plasma membrane, plastid 56.54 49.32
CDY30512 Canola cytosol 9.39 24.7
CDY26211 Canola cytosol, peroxisome, plasma membrane 14.73 23.67
CDX87823 Canola nucleus, peroxisome, plasma membrane 14.73 23.63
CDX83888 Canola cytosol, peroxisome, plasma membrane 14.73 23.56
CDY19179 Canola cytosol, peroxisome, plasma membrane 14.55 23.37
CDX96749 Canola cytosol, peroxisome, plasma membrane 14.55 23.34
CDY06406 Canola peroxisome 14.46 23.12
CDY43913 Canola nucleus, peroxisome, plasma membrane 14.64 22.98
CDY49810 Canola plasma membrane 13.17 22.7
CDY22844 Canola plastid 12.8 22.06
CDY61513 Canola golgi, mitochondrion, peroxisome, plasma membrane 12.52 21.59
CDX77150 Canola plastid 13.44 20.0
CDX71393 Canola plastid 13.9 18.92
CDY04533 Canola mitochondrion 13.72 18.26
CDY18337 Canola plasma membrane 2.39 10.53
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078GCA2UniProt:A0A078GCA2InterPro:AAA+_ATPaseInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSEnsemblPlants:CDY24100ProteinID:CDY24100ProteinID:CDY24100.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00024647001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF304SMART:SM00382SUPFAM:SSF52540
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EEBDDFSEG:seg::
Description
BnaA06g00980DBnaA06g00980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GCA2]
Coordinates
chrLK032153:-:459905..465816
Molecular Weight (calculated)
120511.0 Da
IEP (calculated)
9.052
GRAVY (calculated)
-0.109
Length
1086 amino acids
Sequence
(BLAST)
0001: MSVNRLKHGS NLRLVLLVLW LVCYVSYGQF EDTNDFNNPA VLPLVTQMVY RSLSNSTAAL NQELATRAKF CVKDPDADWN KAFNFSTNLD FLSSCIQKTK
0101: GDIGRRMCTA AEMKFYLNAF FSKTNNPGYL QPNGNCNLTS WVSGCEPGWA CSVDPNEQVD LQNSKDFPER TRNCMSCCEG FFCPRGLTCM IPCPLGAHCP
0201: LATLNKTTSL CQPYTYQLPP GQPNHTCGGA NVWADIRSSG EVFCSAGSYC PTTTRKVPCD SGHYCRMGST SEKPCFKLTS CNPNTANQNM HALGVMVICG
0301: VVTILLIIYN CSDQILTTRE RRQAKSREAA VKKAKANQRW KVARTAATKH VTEIRAQITR TFSGKKPNND GETHKMLARG YSSEVEDLPK YSSSPASSSA
0401: VQPTFEIEDD ATAGSIERPS ATTTGGKRGK GHRIKKSQSQ ILRYAYNQIE KEKAREVENR NLTFSGIVNM ATYSEMKKRT LMELSFKDLT LTLKSNGKHL
0501: LRCVTGSMKP GRITAVMGPS GAGKTSLLSA LAGKAVGCKL SGLILINGKE LSIHSYKKII GFVPQDDIVH GNLTVEENIW FHANCRLPAG QSKADKVLVV
0601: ERVIDSLGLQ AVRSSLVGTV EKRGISGGQR KRVNVGLEMA MEPSILFLDE PTSGLDSASS QLLLKALKHE ALEGVNICMV VHQPSYSLFQ TFNDLVLLAK
0701: GGLTVYHGPV KDVETYFSGL GIIVPERINP PDYYIDVLEG IVTNLNSDVS YKELPQRWML HKGYSVPLDM RNNNSAAAGL EMNPDVRDST INTEQTFVRE
0801: LWGDVKSNFR LRRDKIRHNF LKTRDLSYRT TPSMWLQYKY FLGRIAKQRM REAKLQATDY LILLLAGACL GSLIKASDES FGAPGYTYTI IAVSLLCKIA
0901: ALRSFSLDKL HYWRESASGM SSLACFLAKD TMDCFNTLVK PLVYLSMFYF FTNPRSTFFD NYIVLVCLVY CVTGIAYALA IFLQPGSAQL FSVLLPVVLT
1001: LVATQPKDSE AMKIIADLCY PKWALQAFVI GNAQKYYGVW MITRCGSLMK SGYDINEWNL CIMILILIGG VTRMIAFVGM IILQKR
Best Arabidopsis Sequence Match ( AT1G53390.1 )
(BLAST)
0001: MNFNTSLVIM LLNLKMSVDR RNWLKHGCNL RLVILVLWLV CYVSNGQTIG DTSDFNNPAV LPLVTQMVYR SLSNSTAALN RELGIRAKFC VKDPDADWNR
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK
Arabidopsis Description
ABCG24ABC transporter G family member 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAG3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.