Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11955 | Canola | plasma membrane | 98.85 | 86.76 |
| CDY36779 | Canola | plasma membrane | 95.08 | 84.94 |
| AT5G60740.1 | Thale cress | plasma membrane | 94.14 | 81.06 |
| KRH25067 | Soybean | plasma membrane | 71.1 | 62.24 |
| KRH30616 | Soybean | plasma membrane | 71.1 | 61.84 |
| VIT_06s0004g02490.t01 | Wine grape | plasma membrane | 69.84 | 60.69 |
| Solyc11g069820.1.1 | Tomato | plasma membrane | 66.91 | 58.46 |
| PGSC0003DMT400031316 | Potato | mitochondrion, plastid | 64.92 | 57.84 |
| Solyc06g075020.2.1 | Tomato | plasma membrane | 64.29 | 56.12 |
| CDX74994 | Canola | plasma membrane | 63.35 | 55.97 |
| CDX91328 | Canola | plasma membrane | 63.35 | 55.97 |
| CDY25855 | Canola | plasma membrane | 60.63 | 55.83 |
| CDY51880 | Canola | plasma membrane | 60.42 | 54.74 |
| CDY62072 | Canola | endoplasmic reticulum, golgi, plasma membrane | 60.21 | 53.99 |
| CDY62076 | Canola | plasma membrane | 61.26 | 53.87 |
| CDY24100 | Canola | plasma membrane | 61.15 | 53.78 |
| CDY24098 | Canola | plasma membrane | 59.37 | 53.24 |
| CDY70653 | Canola | extracellular, golgi, vacuole | 16.86 | 45.48 |
| CDY30512 | Canola | cytosol | 10.89 | 25.18 |
| CDY26211 | Canola | cytosol, peroxisome, plasma membrane | 16.23 | 22.93 |
| CDY49810 | Canola | plasma membrane | 14.97 | 22.7 |
| CDY19179 | Canola | cytosol, peroxisome, plasma membrane | 16.02 | 22.63 |
| CDX96749 | Canola | cytosol, peroxisome, plasma membrane | 16.02 | 22.6 |
| CDX83888 | Canola | cytosol, peroxisome, plasma membrane | 16.02 | 22.53 |
| CDY22844 | Canola | plastid | 14.66 | 22.22 |
| CDX87823 | Canola | nucleus, peroxisome, plasma membrane | 15.6 | 22.01 |
| CDY43913 | Canola | nucleus, peroxisome, plasma membrane | 15.81 | 21.82 |
| CDY06406 | Canola | peroxisome | 15.18 | 21.35 |
| CDY61513 | Canola | golgi, mitochondrion, peroxisome, plasma membrane | 13.72 | 20.79 |
| CDX77150 | Canola | plastid | 15.08 | 19.73 |
| CDX71393 | Canola | plastid | 15.6 | 18.67 |
| CDY04533 | Canola | mitochondrion | 15.6 | 18.26 |
| CDY18337 | Canola | plasma membrane | 1.99 | 7.69 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | GO:A0A078C2F8 | InterPro:AAA+_ATPase | InterPro:ABC_2_trans | InterPro:ABC_transporter-like |
| InterPro:ABC_transporter_CS | EnsemblPlants:CDX71030 | ProteinID:CDX71030 | ProteinID:CDX71030.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016787 |
| GO:GO:0016887 | EnsemblPlantsGene:GSBRNA2T00140973001 | InterPro:IPR003439 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF01061 |
| ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF435 | SMART:SM00382 | SUPFAM:SSF52540 |
| TMHMM:TMhelix | UniParc:UPI0004EDBE99 | SEG:seg | : | : | : |
Description
BnaC03g11140D
Coordinates
chrLK031791:+:3350963..3355493
Molecular Weight (calculated)
106094.0 Da
IEP (calculated)
8.480
GRAVY (calculated)
-0.016
Length
955 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRKLFYQE TYVSFFVSLV FIFHRGVICQ DDSSLDNPAA NRLYNQFVFD KISNLTEVFE DDIKRELGFC ITNVKEDYNE AFNFSSKPGF LNKCGKTTKG
101: DMMQRICTAA EVRIYFNGLL GGAKRATNYL KPNKNCNLSS WMFGCEPGWA CRTAKDVKVD LKDDKNVPVR TQQCAPYCAG FFCPRGITCM IPCPLGAYCP
201: EAKLNRTTGL CDPYHYQLPS GQPNHTCGGA DIWADIVSSS EVFCSAGSFC PSTIDKLPCT RGHFCRTGST AEKNCFKLAT CNPRSTNQNI TAYGIMLFAG
301: LGFLLIILYN CSDQVLATRE RRQAKIEKEK AMQEQNKNLT FSGVISMAND IEIRKRPTIE VAFKDLTITL KGKNKHLMRC VTGKLSPGRV SAVMGPSGAG
401: KTTFLTALTG KAAGCTMSGM ILVNGKVESI QSYKRIIGFV PQDDIVHGNL TVEENLWFSA RCRLPADLPK PEKVLVVERV IESLGLQHVR DSMVGTVEKR
501: GISGGQRKRV NVGLEMVMEP SLLVLDEPTS GLDSSSSQLL LRALRREALE GVNICMVVHQ PSYTLFRMFD DLILLAKGGL ICYQGSVKKV EEYFSSLGIV
601: VPERVNPPDY YIDILEGILK PSTSSGVTYK QLPVRWMLHN GYPVPSDMLK SIEGMASAEN SAHGGSAHGS VVGDDGTSFA GEFWQDVKAN VEIKKDTLQN
701: NFSNSGDLSQ RQVPGVYQQF RYFLGRLGKQ RLREARTLAV DYLILLLAGI CLGTLAKVSD ETFGAMGYTY TVIAVSLLCK ITALRSFSLD KLHYWRESRA
801: GMSSLAYFLA KDTVDYFNTI VKPLVYLSMF YFFNNPRSSV GDNYIVLICL VYCVTGIAFA LAILFEPGPA QLWSVLLPVV LTLIATSTND NKIVESISEL
901: CYTRWALEAF VVSNAQRYKG VWLITRCGSL MENGYNIKHF PRCLIFLTLT GSFVW
101: DMMQRICTAA EVRIYFNGLL GGAKRATNYL KPNKNCNLSS WMFGCEPGWA CRTAKDVKVD LKDDKNVPVR TQQCAPYCAG FFCPRGITCM IPCPLGAYCP
201: EAKLNRTTGL CDPYHYQLPS GQPNHTCGGA DIWADIVSSS EVFCSAGSFC PSTIDKLPCT RGHFCRTGST AEKNCFKLAT CNPRSTNQNI TAYGIMLFAG
301: LGFLLIILYN CSDQVLATRE RRQAKIEKEK AMQEQNKNLT FSGVISMAND IEIRKRPTIE VAFKDLTITL KGKNKHLMRC VTGKLSPGRV SAVMGPSGAG
401: KTTFLTALTG KAAGCTMSGM ILVNGKVESI QSYKRIIGFV PQDDIVHGNL TVEENLWFSA RCRLPADLPK PEKVLVVERV IESLGLQHVR DSMVGTVEKR
501: GISGGQRKRV NVGLEMVMEP SLLVLDEPTS GLDSSSSQLL LRALRREALE GVNICMVVHQ PSYTLFRMFD DLILLAKGGL ICYQGSVKKV EEYFSSLGIV
601: VPERVNPPDY YIDILEGILK PSTSSGVTYK QLPVRWMLHN GYPVPSDMLK SIEGMASAEN SAHGGSAHGS VVGDDGTSFA GEFWQDVKAN VEIKKDTLQN
701: NFSNSGDLSQ RQVPGVYQQF RYFLGRLGKQ RLREARTLAV DYLILLLAGI CLGTLAKVSD ETFGAMGYTY TVIAVSLLCK ITALRSFSLD KLHYWRESRA
801: GMSSLAYFLA KDTVDYFNTI VKPLVYLSMF YFFNNPRSSV GDNYIVLICL VYCVTGIAFA LAILFEPGPA QLWSVLLPVV LTLIATSTND NKIVESISEL
901: CYTRWALEAF VVSNAQRYKG VWLITRCGSL MENGYNIKHF PRCLIFLTLT GSFVW
0001: MNFNTSLVIM LLNLKMSVDR RNWLKHGCNL RLVILVLWLV CYVSNGQTIG DTSDFNNPAV LPLVTQMVYR SLSNSTAALN RELGIRAKFC VKDPDADWNR
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK
Arabidopsis Description
ABCG24ABC transporter G family member 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAG3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.