CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89865	Soybean	plastid	73.37	61.84
Solyc06g074970.1.1	Tomato	plastid	77.72	53.32
CDX77150	Canola	plastid	92.01	52.05
AT2G28070.1	Thale cress	plastid	88.86	50.27
VIT_06s0061g00350.t01	Wine grape	plastid	81.84	46.81
PGSC0003DMT400050589	Potato	plastid	81.84	46.75
Solyc11g069710.1.1	Tomato	plastid	81.6	46.61
KRH22852	Soybean	cytosol, plastid	80.87	46.13
KRH26514	Soybean	plasma membrane, plastid	79.66	45.44
CDX71393	Canola	plastid	87.65	45.36
CDY04533	Canola	mitochondrion	89.1	45.1
PGSC0003DMT400031312	Potato	plastid	78.21	44.67
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	72.16	40.82
EER90467	Sorghum	cytosol, plasma membrane, plastid	65.38	37.4
HORVU5Hr1G125010.1	Barley	cytosol, peroxisome, plasma membrane, plastid	62.71	35.82
TraesCS5D01G551400.1	Wheat	cytosol, peroxisome, plasma membrane	62.47	35.64
TraesCS4A01G315900.1	Wheat	cytosol, peroxisome, plasma membrane	62.47	35.49
Os03t0859500-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	60.77	34.91
Zm00001d034918_P003	Maize	cytosol, nucleus, plasma membrane, plastid	64.89	24.86
CDY43913	Canola	nucleus, peroxisome, plasma membrane	31.72	18.93
CDX87823	Canola	nucleus, peroxisome, plasma membrane	30.75	18.76
CDY22844	Canola	plastid	27.6	18.1
CDY06406	Canola	peroxisome	29.54	17.97
CDY49810	Canola	plasma membrane	27.36	17.94
CDY26211	Canola	cytosol, peroxisome, plasma membrane	29.3	17.9
CDY19179	Canola	cytosol, peroxisome, plasma membrane	29.06	17.75
CDX96749	Canola	cytosol, peroxisome, plasma membrane	29.06	17.73
CDX83888	Canola	cytosol, peroxisome, plasma membrane	29.06	17.67
CDY61513	Canola	golgi, mitochondrion, peroxisome, plasma membrane	25.42	16.67
CDX71030	Canola	plasma membrane	25.18	10.89
CDY36779	Canola	plasma membrane	25.67	9.92
CDY11955	Canola	plasma membrane	25.67	9.74
CDY25855	Canola	plasma membrane	24.21	9.64
CDY62076	Canola	plasma membrane	24.94	9.48
CDY51880	Canola	plasma membrane	23.97	9.39
CDY24100	Canola	plasma membrane	24.7	9.39
CDX91328	Canola	plasma membrane	24.21	9.25
CDX74994	Canola	plasma membrane	24.21	9.25
CDY62072	Canola	endoplasmic reticulum, golgi, plasma membrane	23.49	9.11
CDY24098	Canola	plasma membrane	23.0	8.92
CDY70653	Canola	extracellular, golgi, vacuole	5.08	5.93
CDY18337	Canola	plasma membrane	0.73	1.21

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078GZA0	UniProt:A0A078GZA0	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like
EnsemblPlants:CDY30512	ProteinID:CDY30512	ProteinID:CDY30512.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00045230001	InterPro:IPR003439
InterPro:P-loop_NTPase	PFAM:PF00005	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF447	SMART:SM00382
SUPFAM:SSF52540	UniParc:UPI0004EE9BDD	SEG:seg	:	:	:

Description

BnaA04g16210DBnaA04g16210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZA0]

Coordinates

chrLK032254:-:163650..166207

Molecular Weight (calculated)

45240.3 Da

IEP (calculated)

8.297

GRAVY (calculated)

-0.174

Length

413 amino acids

Sequence
(BLAST)

001: MEDIQSQSDL YRSSSSSASS PTSRVPSSHF FYVRKPGSLT QPISFEDSPE WEDTDDADVR MDEEANIGGG GDSINDATAT PISPSLSKIN SGSMTSPPVV
101: PEGGGGNAVR KIAGASITWK DLTVTMKGKR RYSDKVVKSS NGYALPGTMT VIMGPAKSGK STLLRALAGR LPPSAKMYGD VFVNGSKSHM PYGSYGYVER
201: ETQLIGSLTV REFLYYSALL QLPGFLCQKS SVVEDAIQAM SLSDYANKLI GGGDCYMKGL RSGERRRVSI ARELVMRPHI LFIDEPLYHL DSVSTLLMMV
301: TLKKLASMGC TLVFTIYQSS TEVFGLFDRI CLLSNGNTLF FGETLACLQH FSNAGFPCPI MQSPSDHFLR AINTDFDRII AMCKNWQVRT PTTENIALCR
401: PSQIIFRPCS KKY

Best Arabidopsis Sequence Match ( AT2G28070.2 )
(BLAST)

001: MEEIQSQSDL YRSSSSSASS PTSRVPSSHF FYVRKPGSLR QPISFEDSPE WEDTPDVDLR MEDEAGGGDS INDATTTPVS PSLSKMNSGS MASPPVPEGG
101: AGTGVVRKIA GASIAWKDLT VTMKGKRKYS DKVVKSSNGY AFPGTMTVIM GPAKSGKSTL LRALAGRLPP SAKMYGEVFV NGSKSHMPYG SYGFVERETQ
201: LIGSLTVREF LYYSALLQLP GFLFQKRSVV EDAIQAMSLS DYANKLIGGH CYMKGLRSGE RRRVSIAREL VMRPHILFID EPLYHLDSVS ALLMMVTLKK
301: LASMGCTLVF TIYQSSTEVF GLFDRICLLS NGNTLFFGET LACLQHFSNA GFPCPIMQSP SDHFLRAINT DFDRIIAMCK NWQDDNGDFS AVNMDTAVAI
401: RTLEATYKSS ADADSVEAMI IKLTEREGTQ LKSKGKAGAA TRVAVLTWRS LLVMSREWKY YWLRLILYMI LTLSIGTLYS GLGHSLSSVA TRVAAVFVFV
501: SFASLLGIAG IPSLLKEIKI YRSEASNQHS GAFVFLLGQF LGSIPFLFLM SISSSLVFYF MVGLRDDFSL LMYFVLNFFM CLLVNEGLML FIACIWRDVY
601: WSTLTLISVH VIMMLAAGHF RIRTALPKPV WTYPFAYISF HTYSIEGLLE NEYLGEVFAV GEVRSISGYQ AIQGNYQISP DTNAKWRNML VLLAMAFGYR
701: LLVYVLLRFG LNKNVSGRLL LSHKKNNSSR

Arabidopsis Description

ABCG3ABC transporter G family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.