CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX90725
CDY05064

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21090.1	CDX90725	AT4G09570.1	19130088
AT3G21090.1	CDY05064	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18337	Canola	plasma membrane	36.38	100.0
CDY61513	Canola	golgi, mitochondrion, peroxisome, plasma membrane	88.37	95.24
AT3G21090.1	Thale cress	cytosol, peroxisome, plasma membrane	94.26	92.62
CDX87823	Canola	nucleus, peroxisome, plasma membrane	84.54	84.79
CDY43913	Canola	nucleus, peroxisome, plasma membrane	85.13	83.53
KRH24076	Soybean	cytosol, peroxisome, plasma membrane	72.31	70.65
KRH29048	Soybean	cytosol, peroxisome, plasma membrane	71.87	69.81
VIT_06s0061g00230.t01	Wine grape	plasma membrane	63.18	68.97
Solyc11g065350.1.1	Tomato	cytosol, peroxisome, plasma membrane	67.16	66.86
PGSC0003DMT400077106	Potato	cytosol, peroxisome, plasma membrane	67.16	66.86
EES19248	Sorghum	cytosol, peroxisome, plasma membrane	62.74	61.92
Zm00001d010426_P001	Maize	plastid	62.59	61.59
HORVU1Hr1G030200.1	Barley	nucleus, peroxisome, plasma membrane	61.71	60.81
TraesCS1A01G126900.1	Wheat	nucleus, peroxisome, plasma membrane	61.71	60.81
TraesCS1B01G147700.1	Wheat	nucleus, peroxisome, plasma membrane	61.71	60.81
TraesCS1D01G126600.1	Wheat	nucleus, peroxisome, plasma membrane	61.71	60.81
Os05t0222200-01	Rice	nucleus, peroxisome, plasma membrane	62.3	60.43
GSMUA_Achr4P00390_001	Banana	plasma membrane	54.64	59.94
CDY22844	Canola	plastid	53.76	57.94
CDY49810	Canola	plasma membrane	53.76	57.94
CDY19179	Canola	cytosol, peroxisome, plasma membrane	49.48	49.7
CDY26211	Canola	cytosol, peroxisome, plasma membrane	49.34	49.56
CDX83888	Canola	cytosol, peroxisome, plasma membrane	49.04	49.04
CDX96749	Canola	cytosol, peroxisome, plasma membrane	48.9	49.04
GSMUA_Achr4P00380_001	Banana	plastid	53.02	43.43
CDY30512	Canola	cytosol	17.97	29.54
CDX77150	Canola	plastid	30.93	28.77
CDX71393	Canola	plastid	32.25	27.44
CDY04533	Canola	mitochondrion	31.66	26.35
CDY25855	Canola	plasma membrane	23.42	15.33
CDY62072	Canola	endoplasmic reticulum, golgi, plasma membrane	24.01	15.31
CDX71030	Canola	plasma membrane	21.35	15.18
CDY24098	Canola	plasma membrane	23.71	15.12
CDY51880	Canola	plasma membrane	23.27	14.99
CDY62076	Canola	plasma membrane	23.12	14.46
CDY24100	Canola	plasma membrane	23.12	14.46
CDY11955	Canola	plasma membrane	22.24	13.88
CDX91328	Canola	plasma membrane	21.94	13.78
CDX74994	Canola	plasma membrane	21.94	13.78
CDY36779	Canola	plasma membrane	21.65	13.75
CDY70653	Canola	extracellular, golgi, vacuole	0.44	0.85

Protein Annotations

MapMan:21.9.4.2	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	GO:A0A078EZ34	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlants:CDY06406	ProteinID:CDY06406	ProteinID:CDY06406.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00122387001	InterPro:IPR003439	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF338
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0004EE4FEC	SEG:seg	:

Description

BnaC05g31240D

Coordinates

chrLK031969:-:406131..409920

Molecular Weight (calculated)

75902.0 Da

IEP (calculated)

9.362

GRAVY (calculated)

0.054

Length

679 amino acids

Sequence
(BLAST)

001: MELEGSSSCP RPLPSKAEMS RGAYLAWEDL TVVIPNFSDG PTRRLLQRLN GYAEPGRIMA IMGPSGSGKS TLLDSLAGQL ARNVIMTGNL LLNGKKARLD
101: YGLVAYVTQE DILLGTLTVR ETITYSARLR LSSDMSNEEV SDIVEGTIME LGLQDCADRA IGNWHARGVS GGERKRVSIA LEILTRPQIL FLDEPTSGLD
201: SASAFFVIQT LRNIARDGRT VISSIHQPSS EVFALFDDLF LLSSGESVYF GEAKSAVEFF AESGFPCPKK RNPSDHFLRC INSDFDTDTP ATSDPLLNLA
301: TPVIRARLVE NYRRSKYAKS AKSRIQELSN IDGNEMEVRR GSEASWWKQL RTLTARSFIN MCRDVGYYWT RIVSYIVVSI SVGTIFYDVG YSYTSILARV
401: SCGGFITGFM TFMSIGGFPS FLEEMKVFYK ERMSGYYGVS VYILSNYISS FPFLVSLSVI TGTITYNLVK FRPGFSHYAF FCLNIFFSVS VIESLMMVVA
501: SLVPNFLMGL VTGAGLIGII MMTSGFFRLL PDLPKIFWRY PVSYISYGSW AIQGGYKNDF LGLEFEPLFP GEPKMTGEEV INKIFRVKVT HSKWWDLAAV
601: VGILVCYRLL FFVVLKLKER AGPALKAIQA KRTMRNLDRR PSFKRMPSLS LSLSSMSSRR HQPFRSLSSQ EGLNSPAHY

Best Arabidopsis Sequence Match ( AT3G21090.1 )
(BLAST)

001: MELEGSSSGR RQLPSKLEMS RGAYLAWEDL TVVIPNFSDG PTRRLLQRLN GYAEPGRIMA IMGPSGSGKS TLLDSLAGRL ARNVVMTGNL LLNGKKARLD
101: YGLVAYVTQE DVLLGTLTVR ETITYSAHLR LPSDMSKEEV SDIVEGTIME LGLQDCSDRV IGNWHARGVS GGERKRVSIA LEILTRPQIL FLDEPTSGLD
201: SASAFFVIQA LRNIARDGRT VISSVHQPSS EVFALFDDLF LLSSGESVYF GEAKSAVEFF AESGFPCPKK RNPSDHFLRC INSDFDTVTA TLKGSQRIQE
301: TPATSDPLMN LATSVIKARL VENYKRSKYA KSAKSRIREL SNIEGLEMEI RKGSEATWWK QLRTLTARSF INMCRDVGYY WTRIISYIVV SISVGTIFYD
401: VGYSYTSILA RVSCGGFITG FMTFMSIGGF PSFLEEMKVF YKERLSGYYG VSVYILSNYI SSFPFLVAIS VITGTITYNL VKFRPGFSHY AFFCLNIFFS
501: VSVIESLMMV VASVVPNFLM GLITGAGLIG IIMMTSGFFR LLPDLPKIFW RYPVSYISYG SWAIQGGYKN DFLGLEFEPL FPGEPKMTGE EVIEKVFGVK
601: VTYSKWWDLA AVVAILVCYR LLFFVVLKLR ERAGPALKAI QAKRTMRNLD RRPSFKRMPS LSLSLSSMSS RRHQPLRSLS SQEGLNSPIH Y

Arabidopsis Description

ABCG15ABC transporter G family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWI9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.