CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011981.1-P	Field mustard	plastid	89.34	99.59
AT2G28070.1	Thale cress	plastid	84.44	94.38
CDX71393	Canola	plastid	91.79	93.86
CDX77150	Canola	plastid	82.6	92.33
CDY30512	Canola	cytosol	45.1	89.1
KRG89865	Soybean	plastid	49.14	81.84
VIT_06s0061g00350.t01	Wine grape	plastid	70.59	79.78
Solyc06g074970.1.1	Tomato	plastid	58.82	79.73
KRH22852	Soybean	cytosol, plastid	70.22	79.14
KRH26514	Soybean	plasma membrane, plastid	70.1	79.01
Solyc11g069710.1.1	Tomato	plastid	69.12	78.01
PGSC0003DMT400050589	Potato	plastid	69.12	78.01
PGSC0003DMT400031312	Potato	plastid	66.91	75.52
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	62.01	69.32
EER90467	Sorghum	cytosol, plasma membrane, plastid	57.23	64.68
TraesCS5D01G551400.1	Wheat	cytosol, peroxisome, plasma membrane	56.62	63.81
HORVU5Hr1G125010.1	Barley	cytosol, peroxisome, plasma membrane, plastid	56.37	63.62
TraesCS4A01G315900.1	Wheat	cytosol, peroxisome, plasma membrane	56.0	62.86
Os03t0859500-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	54.53	61.89
Zm00001d034918_P003	Maize	cytosol, nucleus, plasma membrane, plastid	56.74	42.95
CDY26211	Canola	cytosol, peroxisome, plasma membrane	28.06	33.88
CDY19179	Canola	cytosol, peroxisome, plasma membrane	27.94	33.73
CDX96749	Canola	cytosol, peroxisome, plasma membrane	27.94	33.68
CDX83888	Canola	cytosol, peroxisome, plasma membrane	27.82	33.43
CDY43913	Canola	nucleus, peroxisome, plasma membrane	27.33	32.23
CDY22844	Canola	plastid	24.75	32.06
CDX87823	Canola	nucleus, peroxisome, plasma membrane	26.59	32.05
CDY06406	Canola	peroxisome	26.35	31.66
CDY49810	Canola	plasma membrane	24.26	31.43
CDY61513	Canola	golgi, mitochondrion, peroxisome, plasma membrane	23.9	30.95
CDY18337	Canola	plasma membrane	6.86	22.67
CDX71030	Canola	plasma membrane	18.26	15.6
CDY25855	Canola	plasma membrane	18.38	14.46
CDY51880	Canola	plasma membrane	18.38	14.23
CDY62072	Canola	endoplasmic reticulum, golgi, plasma membrane	18.38	14.08
CDY11955	Canola	plasma membrane	18.63	13.97
CDY36779	Canola	plasma membrane	18.26	13.94
CDY62076	Canola	plasma membrane	18.5	13.9
CDY24098	Canola	plasma membrane	18.14	13.9
CDY24100	Canola	plasma membrane	18.26	13.72
CDX91328	Canola	plasma membrane	18.01	13.6
CDX74994	Canola	plasma membrane	18.01	13.6
CDY70653	Canola	extracellular, golgi, vacuole	3.06	7.06

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	GO:A0A078EY74	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
EnsemblPlants:CDY04533	ProteinID:CDY04533	ProteinID:CDY04533.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887
EnsemblPlantsGene:GSBRNA2T00118705001	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF200	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0004EE7F36
SEG:seg	:	:	:	:	:

Description

BnaA07g13590D

Coordinates

chrLK031955:+:512409..516326

Molecular Weight (calculated)

90600.0 Da

IEP (calculated)

9.322

GRAVY (calculated)

0.109

Length

816 amino acids

Sequence
(BLAST)

001: MNNKVIGHKP WIKYLKFKGF PHPYPCIFHI CRTQRVESSH SLALSLFPRR DSLSLSGGST SFRSRFVFSS SLNLTITCES SKMEEIQSQS DLYRSSSSCA
101: SSPTSRVPSS HFFYVRKPGS LRQPISFEDS PEWDDPDARM EYEAGGVGGG GGDSINDATA TPISPSLSKI NSGSMASPHV PEGGGGGGNA VRKIAGASIA
201: WRDLTVTMTG KRKYSDKVVK SSNGYAFPGT MTVIMGPAKS GKSTLLRALA GRLPPSAKMY GEVFVNGSKS HMPYGSYGYV ERETELIGSL TVREFLYYSA
301: LLQLPGFLFQ KRGVVEDAIQ AMSLSDYANK LIGGHCYMKG LRSGERRRVS IARELVMRPH ILFIDEPLYH LDSVSALLMM VTLKKLASMG CTLVFTIYQS
401: STEVFGLFDR ICLLSNGNTL FFGETLACLQ HFSNAGFPCP IMQSPSDHFL RAINTDFDRI IAMCKNWQDD NGDFSAVNMD TAVAIRTLEA TYKSSEDAAS
501: VETMIFKLTE REGTQLKSKG KAGAATRVAV LTWRSLLVMS REWKYYWLRL ILYMILTLCI GTLYSGLGHS LSSVATRVSA VFVFVSFASL LGIAGIPSLL
601: KEIKIYGSEA SNQHSGAFVF LLGQFLGSIP FLFLMSISSS LVFYFMVGLR DDFSLLMYFV LNFFMCLLVN EGLMLFIACI WRDVYWSTLT LISIHVIMML
701: AAGHFRIRNA LPKPVWTYPL AYISFHTYSI EGLLENEYLG EVFAVGEVRS ISGYEAIRGD YQISPDTSSK WRNMLVLLAM AFGYRLIVYV LLRFGLNKNV
801: SARLLLCHRK NNSSSR

Best Arabidopsis Sequence Match ( AT2G28070.2 )
(BLAST)

001: MEEIQSQSDL YRSSSSSASS PTSRVPSSHF FYVRKPGSLR QPISFEDSPE WEDTPDVDLR MEDEAGGGDS INDATTTPVS PSLSKMNSGS MASPPVPEGG
101: AGTGVVRKIA GASIAWKDLT VTMKGKRKYS DKVVKSSNGY AFPGTMTVIM GPAKSGKSTL LRALAGRLPP SAKMYGEVFV NGSKSHMPYG SYGFVERETQ
201: LIGSLTVREF LYYSALLQLP GFLFQKRSVV EDAIQAMSLS DYANKLIGGH CYMKGLRSGE RRRVSIAREL VMRPHILFID EPLYHLDSVS ALLMMVTLKK
301: LASMGCTLVF TIYQSSTEVF GLFDRICLLS NGNTLFFGET LACLQHFSNA GFPCPIMQSP SDHFLRAINT DFDRIIAMCK NWQDDNGDFS AVNMDTAVAI
401: RTLEATYKSS ADADSVEAMI IKLTEREGTQ LKSKGKAGAA TRVAVLTWRS LLVMSREWKY YWLRLILYMI LTLSIGTLYS GLGHSLSSVA TRVAAVFVFV
501: SFASLLGIAG IPSLLKEIKI YRSEASNQHS GAFVFLLGQF LGSIPFLFLM SISSSLVFYF MVGLRDDFSL LMYFVLNFFM CLLVNEGLML FIACIWRDVY
601: WSTLTLISVH VIMMLAAGHF RIRTALPKPV WTYPFAYISF HTYSIEGLLE NEYLGEVFAV GEVRSISGYQ AIQGNYQISP DTNAKWRNML VLLAMAFGYR
701: LLVYVLLRFG LNKNVSGRLL LSHKKNNSSR

Arabidopsis Description

ABCG3ABC transporter G family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.