Factsheet for GSMUA_Achr11P17040_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0061g00350.t01	Wine grape	plastid	76.58	77.42
KRG89865	Soybean	plastid	51.1	76.12
KRH22852	Soybean	cytosol, plastid	73.01	73.62
Solyc06g074970.1.1	Tomato	plastid	60.68	73.59
KRH26514	Soybean	plasma membrane, plastid	72.6	73.2
Solyc11g069710.1.1	Tomato	plastid	72.33	73.03
PGSC0003DMT400050589	Potato	plastid	72.05	72.75
CDY30512	Canola	cytosol	40.82	72.16
HORVU5Hr1G125010.1	Barley	cytosol, peroxisome, plasma membrane, plastid	70.96	71.65
EER90467	Sorghum	cytosol, plasma membrane, plastid	70.41	71.19
TraesCS5D01G551400.1	Wheat	cytosol, peroxisome, plasma membrane	70.14	70.72
TraesCS4A01G315900.1	Wheat	cytosol, peroxisome, plasma membrane	70.14	70.43
PGSC0003DMT400031312	Potato	plastid	69.32	69.99
AT2G28070.1	Thale cress	plastid	69.86	69.86
Os03t0859500-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	68.77	69.82
Bra011981.1-P	Field mustard	plastid	68.9	68.72
CDX77150	Canola	plastid	67.53	67.53
Bra034385.1-P	Field mustard	plastid	63.29	67.05
CDX71393	Canola	plastid	68.9	63.03
CDY04533	Canola	mitochondrion	69.32	62.01
Zm00001d034918_P003	Maize	cytosol, nucleus, plasma membrane, plastid	70.82	47.96
GSMUA_Achr6P02130_001	Banana	mitochondrion	28.77	35.59
GSMUA_AchrUn_...	Banana	plasma membrane	28.49	35.02
GSMUA_Achr6P04180_001	Banana	plasma membrane	27.53	34.01
GSMUA_Achr10P...	Banana	plasma membrane	19.45	33.97
GSMUA_Achr5P10800_001	Banana	cytosol, peroxisome, plasma membrane	31.64	33.33
GSMUA_AchrUn_...	Banana	plasma membrane	26.44	32.94
GSMUA_Achr3P20410_001	Banana	plasma membrane	27.67	32.69
GSMUA_Achr5P19820_001	Banana	cytosol, peroxisome, plasma membrane	29.86	32.68
GSMUA_Achr4P00390_001	Banana	plasma membrane	27.26	32.15
GSMUA_Achr4P00380_001	Banana	plastid	27.12	23.88
GSMUA_Achr4P12050_001	Banana	mitochondrion, plasma membrane	21.23	14.72
GSMUA_Achr8P14250_001	Banana	plasma membrane	20.27	14.67
GSMUA_Achr11P...	Banana	plasma membrane	20.14	14.63
GSMUA_Achr4P05530_001	Banana	plasma membrane	18.63	13.53

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSMUA_Achr11G17040_001
EnsemblPlants:GSMUA_Achr11P17040_001	EnsemblPlants:GSMUA_Achr11T17040_001	InterPro:IPR003439	UniProt:M0RSY4	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF200	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0002957CD6	SEG:seg	:	:	:

Description

ABC transporter G family member 3 [Source:GMGC_GENE;Acc:GSMUA_Achr11G17040_001]

Coordinates

chr11:-:18706943..18716891

Molecular Weight (calculated)

80716.4 Da

IEP (calculated)

7.926

GRAVY (calculated)

0.295

Length

730 amino acids

Sequence
(BLAST)

001: MEEIQSYSDN YRSSSSSASS PIGRPPAGAF FYLRKPGTLR QPISFEDSPD WDDTEIDAHL EEVGDSIHIA TATASPSLSK INSGSLPSPS LPEASTSVTA
101: RKIAGASIVW KELTVTLNEK GKYSDKVVKS SNGYALPGTL TVIMGPARSG KSTLLRSIAG KLQDPARMYG EVFVNGVKSC MPYGSYGYVD RDDMLIESLT
201: VREMLYYSAL LQLPGFFFQK KSFIEDAISA MSLGDFADSL IGGHCYTKSL PSGERRRVSI ARELVMRPHV LFIDEPLYHL DSVSALLLMV TLKKLASTGC
301: TLIFTMYQSS TEVFGLFDRI CLLSNGNTLF FGETLACLQH FSNAGFPCPI MQSPSDHFLR AINTDFDRII AMCKNLQEDN SDLSSVNMDT AVAIRTLEAT
401: YKSSADSAAV ESMIVKLIDK GGPYLKSKGK ASCATRIAVL TWRSLLIMSR EWKYFWIRFV LYLLLTLSIG TIFSNSGDSL SSVTVRVAAV FSFVSFILLL
501: SVAGLPAHIN EIKIFTHEES NEHSGPVVFL LGHLLSSIPF LFLVSITTAL IFYFLVGMRN EFSLLMYFIL NVFMCLLANE AFMMVVALIW LETFKCILTL
601: VFIHVMMMLV AGYLKIADAL PGPVWKCPLS YVAFHTYAIE ACNHRGLLEN EYVGTSFAVG QVRAISGVQA VHASYDISPS RNAKWGNLLA LFLMAVGYRV
701: LLFVLLRFNV RKNIVNCNFC CLKMNTTKSR

Best Arabidopsis Sequence Match ( AT2G28070.2 )
(BLAST)

001: MEEIQSQSDL YRSSSSSASS PTSRVPSSHF FYVRKPGSLR QPISFEDSPE WEDTPDVDLR MEDEAGGGDS INDATTTPVS PSLSKMNSGS MASPPVPEGG
101: AGTGVVRKIA GASIAWKDLT VTMKGKRKYS DKVVKSSNGY AFPGTMTVIM GPAKSGKSTL LRALAGRLPP SAKMYGEVFV NGSKSHMPYG SYGFVERETQ
201: LIGSLTVREF LYYSALLQLP GFLFQKRSVV EDAIQAMSLS DYANKLIGGH CYMKGLRSGE RRRVSIAREL VMRPHILFID EPLYHLDSVS ALLMMVTLKK
301: LASMGCTLVF TIYQSSTEVF GLFDRICLLS NGNTLFFGET LACLQHFSNA GFPCPIMQSP SDHFLRAINT DFDRIIAMCK NWQDDNGDFS AVNMDTAVAI
401: RTLEATYKSS ADADSVEAMI IKLTEREGTQ LKSKGKAGAA TRVAVLTWRS LLVMSREWKY YWLRLILYMI LTLSIGTLYS GLGHSLSSVA TRVAAVFVFV
501: SFASLLGIAG IPSLLKEIKI YRSEASNQHS GAFVFLLGQF LGSIPFLFLM SISSSLVFYF MVGLRDDFSL LMYFVLNFFM CLLVNEGLML FIACIWRDVY
601: WSTLTLISVH VIMMLAAGHF RIRTALPKPV WTYPFAYISF HTYSIEGLLE NEYLGEVFAV GEVRSISGYQ AIQGNYQISP DTNAKWRNML VLLAMAFGYR
701: LLVYVLLRFG LNKNVSGRLL LSHKKNNSSR

Arabidopsis Description

ABCG3ABC transporter G family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.