Factsheet for GSMUA_Achr11P01990_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
golgi 3
plasma membrane 5
endoplasmic reticulum 3
vacuole 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P14250_001	Banana	plasma membrane	76.02	75.72
GSMUA_Achr4P12050_001	Banana	mitochondrion, plasma membrane	64.48	61.54
GSMUA_Achr4P05530_001	Banana	plasma membrane	60.4	60.4
Solyc04g025170.2.1	Tomato	mitochondrion	55.82	55.0
VIT_13s0019g04600.t01	Wine grape	plasma membrane	60.99	54.73
Os04t0194500-01	Rice	plasma membrane	57.31	54.08
KRH71703	Soybean	plasma membrane	59.4	53.64
KRG91932	Soybean	plasma membrane	59.4	53.54
CDY25855	Canola	plasma membrane	55.12	53.42
KRH34842	Soybean	plasma membrane	59.3	53.41
Bra038121.1-P	Field mustard	plasma membrane	55.22	52.66
CDY51880	Canola	plasma membrane	54.83	52.28
CDY24100	Canola	plasma membrane	56.22	52.03
CDY62076	Canola	plasma membrane	56.22	52.03
CDY24098	Canola	plasma membrane	55.12	52.02
AT1G53390.1	Thale cress	plasma membrane	57.21	51.85
Bra039668.1-P	Field mustard	plasma membrane	56.02	51.84
KXG25878	Sorghum	plasma membrane	56.52	51.82
CDY62072	Canola	endoplasmic reticulum, golgi, plasma membrane	54.83	51.74
Zm00001d025031_P001	Maize	plasma membrane	56.32	51.41
Zm00001d004335_P001	Maize	plasma membrane	55.92	51.37
TraesCS2D01G048800.1	Wheat	plasma membrane	54.33	50.46
TraesCS2B01G060900.1	Wheat	plasma membrane	54.23	50.32
TraesCS2A01G049700.2	Wheat	plasma membrane	54.03	50.28
Bra039669.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.14	46.33
GSMUA_Achr3P20410_001	Banana	plasma membrane	15.82	25.73
GSMUA_Achr6P02130_001	Banana	mitochondrion	14.93	25.42
GSMUA_AchrUn_...	Banana	plasma membrane	14.93	25.25
GSMUA_Achr6P04180_001	Banana	plasma membrane	14.63	24.87
GSMUA_Achr5P10800_001	Banana	cytosol, peroxisome, plasma membrane	16.52	23.95
GSMUA_AchrUn_...	Banana	plasma membrane	13.63	23.38
GSMUA_Achr5P19820_001	Banana	cytosol, peroxisome, plasma membrane	14.93	22.49
GSMUA_Achr4P00390_001	Banana	plasma membrane	13.83	22.46
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	14.63	20.14
GSMUA_Achr10P...	Banana	plasma membrane	8.16	19.62
GSMUA_Achr4P00380_001	Banana	plastid	13.63	16.53

Protein Annotations

MapMan:24.1.3.2.2	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSMUA_Achr11G01990_001	EnsemblPlants:GSMUA_Achr11P01990_001	EnsemblPlants:GSMUA_Achr11T01990_001	InterPro:IPR003439
UniProt:M0RNM9	InterPro:P-loop_NTPase	PFAM:PF00005	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF445	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002969E9E	SEG:seg

Description

ABC transporter G family member 28 [Source:GMGC_GENE;Acc:GSMUA_Achr11G01990_001]

Coordinates

chr11:+:1361004..1379108

Molecular Weight (calculated)

111454.0 Da

IEP (calculated)

8.733

GRAVY (calculated)

-0.030

Length

1005 amino acids

Sequence
(BLAST)

0001: MCLELHIADF LVNLSARLCT EAEVKLYFNS FIDNGGTTNF LKPNINCNSS SWVSGCEPGW ASRVSTDANV DDQESEYLPP RTLDSQPCCA GFFCPYGLTC
0101: MIPCPLGAYC PIATLNRTTG RCDPYNYQLP PGKTNHACGS ADIWADVDHS GDLFCPAGYY CPSTIQKINC SSGHYCRMGS TYETSCLRSS SCHSNTENQN
0201: ITIIGALVMV ALVLLLFIIY NFSDQILAHR ERRQAKSRET ASRTAREAVQ ARERWKAAKN LAIKHAEPSI LSNMSHSSEK ISGSSESVHS NTGDKKPKKN
0301: AMKDKHMHTR TQIFKYAYSE IEKEKALQQE IKLTFSGVIS MARKNEIRTR PLVEISFEDL TLVLKRNKKQ LLKNVTGKLI PGHVTAIMGP SGAGKTTFLS
0401: ALAGRTAGCQ MSGLVLINGK VEPIHAHRKI IGFVPQDDIV HGNLTVEENL WFSAKCRAIY TGTNCLNLLQ KPETGVRRYK IFVSINWQVC KLSTGMSKAD
0501: KVLIVERTID SLGLQAVRNS LVGTVEKRGI SGGQRKRVNV GLEMVMEPSL LMLDEPTSGL DSSSSLLLLR ALRREAVQGV NICMVVHQPS YTLFNMFDDL
0601: ILLAKGGLIA YQGPVKKVEE YFAGLEIMVP ERVNPPDYFI DILEGIVKPS TSVGVKSNQL PLIWMLHNGY NVPPDMHNEL DSVNASVESR TCSASVGSDE
0701: DSGAANVWRD LKGGFEEKRD YLEHNVSKSK GLANRITPGK FKQYKYYLGR VSKQRLREAT TQAVDYLILG LAGVCLGIIT KANDTNLGAA GYTYTVIAVS
0801: LLGQIGALRS FSIEKLQYMR ERASGMSSLA YFLSKDTIDH FNTVVKPVVY LSMFYFFSNP RSSFADNYIV LFALFYCVTG IGYTFAICFQ PSSAQLWSAL
0901: LPVVLTLIAT QQKNSKILVN LCYPKWALEA FVIVNTKSLF VVEQCTQLTA PLCRYSGVWL MTRCGMLSKL GYNINHWGVC LAVLFLYGFV FRCIAFVCLV
1001: MLNKK

Best Arabidopsis Sequence Match ( AT2G37010.1 )
(BLAST)

0001: MRVRVDVCWT QHIFLFFVFG LSFMSFALSL DGDDYSKTGN PKALVSVTNL IYTRLQNLKT VLKADVDRDL GYCIKNLKGD WNEAFNFDKN LDFLSNCVKK
0101: NDGDLTLRLC SAAEIKFYFS SFVRRDEATT VHVKPNINCN LAKWVSGCEP GWSCNADDEK RFDLNNGKIL PSRTRKCQPC CEGFFCPQGL ACMIPCPLGA
0201: YCPLAKLNKT TGFCEPYNYQ IPPGKLNHTC GSADSWVDAE SSGDMFCSPG SYCPTTIRKV TCSSGHYCRQ GSTSQKPCFK LATCNPNTAN QNIHAYGAIL
0301: IASLSLLMIM VYNCSDQVLA TREKRQAKSR EAAARHAKET TQARERWKTA KGVAKNQKMG LSAQLSQTFS RMKSARKDAT PVKASGKSKD KKKEPSNLTK
0401: MMKSMEENPS NNEGFNVGTG SKPGKKPQAP KGKQLHTQSQ IFKYAYGQIE KEKAMEQNNK NLTFSGVISM ATDTEMRTRP VIEVAFKDLT LTLKGKHKHI
0501: LRSVTGKIMP GRVSAVMGPS GAGKTTFLSA LAGKATGCTR TGLILINGRN DSINSYKKIT GFVPQDDVVH GNLTVEENLR FSARCRLSAY MSKADKVLII
0601: ERVIESLGLQ HVRDSLVGTI EKRGISGGQR KRVNVGVEMV MEPSLLILDE PTTGLDSASS QLLLRALRRE ALEGVNICMV VHQPSYTMYK MFDDMIILAK
0701: GGLTVYHGSV KKIEEYFADI GITVPDRVNP PDHYIDILEG IVKPDGDITI EQLPVRWMLH NGYPVPHDML KFCDGLPSSS TGSAQEDSTH NSFSNDLWQD
0801: VKTNVEITKD QLQHNYSNSH DNSNRVTPTV GRQYRYFVGR VGKQRLREAR LQALDFLILL VAGACLGTLA KVNDETIDTL GYTYTIIAVS LLCKISALRS
0901: FSVDKLQYWR ESAAGISSLA HFMAKDTMDH LNTIMKPLVY LSMFYFFNNP RSSFEDNYIV LVCLVYCVTG MAYIFAILYS PSAAQLLSVL VPVVMTLIAN
1001: QDKESMVLKY LGSFCYPKWT LEAFVLSNAQ RYSGVWVVTR CSSLSQNGYD LSDWILCLIV LVLMGLICRF IAYFCMVTFQ KK

Arabidopsis Description

WBC30Putative white-brown complex homolog protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJK6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.