Factsheet for Bra039668.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24100	Canola	plasma membrane	99.36	99.36
Bra038121.1-P	Field mustard	plasma membrane	85.64	88.24
AT1G53390.1	Thale cress	plasma membrane	85.08	83.32
Bra039669.1-P	Field mustard	cytosol, peroxisome, plasma membrane	79.65	76.48
KRG91932	Soybean	plasma membrane	65.75	64.04
KRH34842	Soybean	plasma membrane	65.29	63.53
VIT_13s0019g04600.t01	Wine grape	plasma membrane	65.38	63.39
KRH71703	Soybean	plasma membrane	64.36	62.8
OQU76478	Sorghum	plasma membrane	21.55	61.58
Solyc04g025170.2.1	Tomato	mitochondrion	56.35	60.0
GSMUA_Achr4P05530_001	Banana	plasma membrane	54.7	59.1
GSMUA_Achr4P12050_001	Banana	mitochondrion, plasma membrane	57.27	59.07
HORVU6Hr1G091510.2	Barley	mitochondrion	56.08	58.33
GSMUA_Achr8P14250_001	Banana	plasma membrane	53.22	57.28
Os06t0731200-01	Rice	plasma membrane	52.12	56.88
TraesCSU01G106900.1	Wheat	plasma membrane	55.25	56.55
GSMUA_Achr11P...	Banana	plasma membrane	51.84	56.02
Bra005224.1-P	Field mustard	plasma membrane	53.22	56.01
TraesCS7B01G488900.1	Wheat	plasma membrane	54.6	55.89
Os11t0416900-01	Rice	plasma membrane	56.26	55.49
Zm00001d046068_P001	Maize	plasma membrane	52.85	55.19
HORVU7Hr1G122580.37	Barley	endoplasmic reticulum, vacuole	43.83	54.28
KXG31382	Sorghum	plasma membrane	55.16	54.26
TraesCS6B01G434900.1	Wheat	plasma membrane	55.8	53.63
Zm00001d018500_P002	Maize	plasma membrane	54.79	53.51
Os04t0194500-01	Rice	plasma membrane	52.21	53.24
Bra028945.1-P	Field mustard	plasma membrane	55.99	53.01
Zm00001d004335_P001	Maize	plasma membrane	51.66	51.28
TraesCS2B01G060900.1	Wheat	plasma membrane	50.74	50.88
TraesCS2A01G049700.2	Wheat	plasma membrane	50.55	50.83
TraesCS2D01G048800.1	Wheat	plasma membrane	50.64	50.83
TraesCS6D01G380300.1	Wheat	plasma membrane	56.08	50.79
KXG25878	Sorghum	plasma membrane	51.01	50.55
Zm00001d025031_P001	Maize	plasma membrane	50.55	49.86
TraesCS6A01G395000.2	Wheat	plasma membrane, plastid	56.26	49.08
Bra016584.1-P	Field mustard	cytosol, peroxisome, plasma membrane	15.56	24.11
Bra025944.1-P	Field mustard	cytosol, peroxisome, plasma membrane	14.73	23.67
Bra030437.1-P	Field mustard	nucleus, peroxisome, plasma membrane	14.73	23.12
Bra031249.1-P	Field mustard	peroxisome	14.46	22.72
Bra018911.1-P	Field mustard	plastid	12.98	22.38
Bra034385.1-P	Field mustard	plastid	12.71	20.03
Bra011981.1-P	Field mustard	plastid	13.35	19.81

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra039668
EnsemblPlants:Bra039668.1	EnsemblPlants:Bra039668.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
InterPro:IPR003439	UniProt:M4FEZ6	InterPro:P-loop_NTPase	PFAM:PF00005	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF304	SMART:SM00382	SUPFAM:SSF52540	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000253E7F2	SEG:seg	:	:	:	:

Description

AT1G53390 (E=0.0) | ATPase, coupled to transmembrane movement of substances

Coordinates

chrA06:-:622949..627979

Molecular Weight (calculated)

120550.0 Da

IEP (calculated)

9.060

GRAVY (calculated)

-0.113

Length

1086 amino acids

Sequence
(BLAST)

0001: MSVNRLKHGS NLRLVLLVLW LVCYVCYGQF EDTNDFNNPA VLPLVTQMVY RSLSNSTAAL NQELATRAKF CVKDPDADWN KAFNFSTNLD FLSSCIQKTK
0101: GDIGRRMCTA AEMKFYLNAF FSKTNNPGYL QPNGNCNLTS WVSGCEPGWA CSVDPNEQVD LQNSKEFPER TRNCMSCCEG FFCPRGLTCM IPCPLGAHCP
0201: LATLNKTTSL CQPYTYQLPP GQPNHTCGGA NVWADIRSSG EVFCSAGSYC PTTTRKVPCD SGHYCRMGST SEKPCFKLTS CNPNTANQNM HALGVMVICG
0301: VVTILLIIYN CSDQILTTRE RRQAKSREAA VKKAKANQRW KVARTAATKH VTEIRAQITR TFSGKKPNND GETHKMLARG YSSEVEDLPK YSSSHASSSA
0401: VQPTFEIEDD ATAGSIERPS ATTTGGKRGK GHRIKKSQSQ ILRYAYNQIE KEKAREVENR NLTFSGIVNM ATYSEMKKRT LLELSFKDLT LTLKSNGKHL
0501: LRCVTGSMKP GRITAVMGPS GAGKTSLLSA LAGKAVGCKL SGSILINGKE LSIHSYKKII GFVPQDDVVH GNLTVEENIW FHANCRLPAG QSKADKVLVV
0601: ERVIDSLGLQ AVRSSLVGTV EKRGISGGQR KRVNVGLEMA MEPSILFLDE PTSGLDSASS QLLLKALKHE ALEGVNICMV VHQPSYSLFQ TFNDLVLLAK
0701: GGLTVYHGPV KDVETYFSGL GIIVPERINP PDYYIDVLEG IVTNLNSDVS YKELPQRWML HKGYSVPLDM RNNNSAAAGL EMNPDVRDST INKEQTFVRE
0801: LWGDVKSNFR LRRDKIRHNF LKTRDLSYRT TPSMWLQYKY FLGRIAKQRM REAKLQATDY LILLLAGACL GSLIKASDES FGAPGYTYTI IAVSLLCKIA
0901: ALRSFSLDKL HYWRESASGM SSLACFLAKD TMDCFNTLVK PLVYLSMFYF FTNPRSTFFD NYIVLVCLVY CVTGIAYALA IFLQPGSAQL FSVLLPVVLT
1001: LVATQPKDSE AMKIIADLCY PKWALQAFVI GNAQKYYGVW MITRCGSLMK SGYDINEWNL CIMILILIGG VTRMIAFVGM IILQKR

Best Arabidopsis Sequence Match ( AT1G53390.1 )
(BLAST)

0001: MNFNTSLVIM LLNLKMSVDR RNWLKHGCNL RLVILVLWLV CYVSNGQTIG DTSDFNNPAV LPLVTQMVYR SLSNSTAALN RELGIRAKFC VKDPDADWNR
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK

Arabidopsis Description

ABCG24ABC transporter G family member 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAG3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.