Factsheet for TraesCS6A01G395000.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 3
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G380300.1	Wheat	plasma membrane	94.7	98.33
TraesCS6B01G434900.1	Wheat	plasma membrane	88.92	97.96
HORVU6Hr1G091510.2	Barley	mitochondrion	80.88	96.46
Os11t0416900-01	Rice	plasma membrane	72.29	81.74
KXG31382	Sorghum	plasma membrane	69.4	78.26
Zm00001d018500_P002	Maize	plasma membrane	68.51	76.71
GSMUA_Achr4P12050_001	Banana	mitochondrion, plasma membrane	58.63	69.33
GSMUA_Achr4P05530_001	Banana	plasma membrane	55.66	68.96
CDY25855	Canola	plasma membrane	48.27	57.96
VIT_13s0019g04600.t01	Wine grape	plasma membrane	51.81	57.59
KRG91932	Soybean	plasma membrane	51.33	57.31
Bra038121.1-P	Field mustard	plasma membrane	48.43	57.21
KRH34842	Soybean	plasma membrane	51.08	56.99
CDY51880	Canola	plasma membrane	48.19	56.93
CDY62076	Canola	plasma membrane	49.48	56.72
CDY62072	Canola	endoplasmic reticulum, golgi, plasma membrane	48.43	56.62
CDY24098	Canola	plasma membrane	48.43	56.62
CDY24100	Canola	plasma membrane	49.32	56.54
TraesCS1A01G141400.1	Wheat	mitochondrion, plasma membrane	42.25	56.38
Solyc04g025170.2.1	Tomato	mitochondrion	46.18	56.37
Bra039668.1-P	Field mustard	plasma membrane	49.08	56.26
KRH71703	Soybean	plasma membrane	50.28	56.24
AT1G53390.1	Thale cress	plasma membrane	49.88	56.0
TraesCS2A01G049700.2	Wheat	plasma membrane	47.23	54.44
Bra039669.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.27	50.93
TraesCS2A01G110200.1	Wheat	plastid	13.09	24.29
TraesCS5A01G249900.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	14.3	24.28
TraesCS7A01G566200.1	Wheat	plasma membrane, plastid	13.01	23.44
TraesCS2A01G374100.1	Wheat	plasma membrane	13.49	23.4
TraesCS6A01G140300.2	Wheat	plastid	13.17	23.13
TraesCS1A01G126900.1	Wheat	nucleus, peroxisome, plasma membrane	12.69	22.93
TraesCS4A01G308200.1	Wheat	plastid	12.85	22.89
TraesCS1A01G164500.1	Wheat	cytosol	12.13	22.01
TraesCS4A01G315900.1	Wheat	cytosol, peroxisome, plasma membrane	10.76	18.43

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	GO:GO:0016887
InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF448	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G395000	EnsemblPlants:TraesCS6A01G395000.2
TIGR:cd03213	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:608113133..608118251

Molecular Weight (calculated)

136315.0 Da

IEP (calculated)

8.735

GRAVY (calculated)

-0.143

Length

1245 amino acids

Sequence
(BLAST)

0001: MKEARGPWPV CPHSRPPSAP FLFLLSTTTA PRAPPPPIPA SQPRGLPMPA TTNAYHLGPK APTLQLHRAS SLRPSAQPMA RVAGQQLAAA LLLLTSAAAA
0101: RAIAIGSPAY NVVPRLSSFQ EHAVVVPRLS FEEHAINQDD YGGDGDGVGG GAASAAGGKG LVGNPVVAEI VNKRLKGLTA TFARSIRSQL GYCIKDTYVH
0201: VHSPSSSSSP FFPWDGSIHL VCDLRFGFRL RRDSEWDAAF NFTKDTSFLN NCMKQTNGDL HQRVCTAAEM KFYFNSLIES GEETRWEKSY VRPNKNCNLS
0301: SWIDGCEPGW ACSAGEQKVD LQDAKDIPYR ADDCQACCPG FFCPHALTCM IPCPLGAYCP LSTLNKTTGI CDPYNYQPPA GNPNHTCGSA DNWADVMSTD
0401: DVFCPAGFYC PSTTQKLPCS SGYYCRKGST SQTRCYKKSA CPPNSVNQDI TIFGMLLVIA SCLVLLIIYN FSGQLLTNRE KKQAKSREAA ARYAKETAQA
0501: RERWKTARDV AKKASTGLQS QLSRTFSRKQ KPGQPGGMSS KGMMPSVGTD GAGKKSNLPD MTSSLEENPD GPEGFQMEIG DKTGKKMPKG KQMHSRSQIF
0601: KYAYGQIEKE KAIQQEMEEN DNNMSLSGVV SMAKEHEVGS RMPIEVAFKD LTLTLTGSKK KILRSVTGKL MPGRVAAVMG PSGAGKTTFL SAVAGKATGC
0701: DTSGLVLING KVEPIRAYKR IIGFVPQDDI VHGNLTVEEN LWFNARCRLA ADMSKAEKVL VVERVIESLG LQPVRDSLVG TVEQRGISGG QRKRVNVGVE
0801: MVMEPSVLIL DEPTSGLDSA SSLLLLRALR REALEGVNIS MVVHQPSYTL YRMFDDLILL AKGGMTVYHG PVKKVEEYFS GLGIVVPDRV NPPDYYIDIL
0901: EGIVKPNMSA GVTVKDLPLR WMLHNGYDVP RDMLRSTSGS ESSSRGGADP SSPGADASPS FLSEMWANIK DTIMQKKDEF DYNKSTLDLS NRNTPGILRQ
1001: YRYFLGRVGK QRLREARILA VDYLILCLAG ICLGTLAKVS DETFGALGYT YTVIAVSLLC KIGALRSFAL DKIYYWRERA SGMSSLAYFL AKDTIDHFNT
1101: IVKPIVYLSM FYFFNNPRSS IWENYVVIVA LVYCVTGIGY TLAIFFQPGS AQLWSALLPV VLTLIATQQK DTIIADLCYT KWALEAFVIA NAHNYTGVWL
1201: ITRCGSLQSN GYDISNRSLC LWVLVANGVI FRCVAFFCMV VFQKH

Best Arabidopsis Sequence Match ( AT5G60740.1 )
(BLAST)

0001: MGRRNSYFPG NFVPLFFVFI VLILQQERVI CQEDRSLDNP AANRLYNQFV FDKISNLTEV FEDDIKRELG FCITNVKEDY NEAFNFSTKP DFLNACGKTT
0101: KGDMMQRICT AAEVRIYFNG LLGGAKRATN YLKPNKNCNL SSWMSGCEPG WACRTAKDVK VDLKDDKNVP VRTQQCAPCC AGFFCPRGIT CMIPCPLGAY
0201: CPEANLNRTT GLCDPYHYQL PSGQPNHTCG GADIWADIGS SSEVFCSAGS FCPSTIDKLP CTKGHYCRTG STAELNCFKL ATCNPRSTNQ NITAYGIMLF
0301: AGLGFLLIIL YNCSDQVLAT RERRQAKSRE KAVQSVRDSQ SREKWKSAKD IAKKHATELQ QSFSRTFSRR KSMKQPDLMR GLSQAKPGSD AALPPMLGSS
0401: SDTKKGKKKE KNKLTEMLHD IEQNPEDPEG FNLEIGDKNI KKHAPKGKAL HTQSQMFRYA YGQIEKEKAM QEQNKNLTFS GVISMANDID IRKRPMIEVA
0501: FKDLSITLKG KNKHLMRCVT GKLSPGRVSA VMGPSGAGKT TFLTALTGKA PGCIMTGMIL VNGKVESIQS YKKIIGFVPQ DDIVHGNLTV EENLWFSARC
0601: RLPADLPKPE KVLVVERVIE SLGLQHVRDS LVGTVEKRGI SGGQRKRVNV GLEMVMEPSL LILDEPTSGL DSSSSQLLLR ALRREALEGV NICMVVHQPS
0701: YTLFRMFDDL ILLAKGGLIC YQGPVKKVEE YFSSLGIVVP ERVNPPDYYI DILEGILKPS TSSGVTYKQL PVRWMLHNGY PVPMDMLKSI EGMASSASGE
0801: NSAHGGSAHG SVVGDDGTSF AGEFWQDVKA NVEIKKDNLQ NNFSSSGDLS EREVPGVYQQ YRYFLGRLGK QRLREARTLA VDYLILLLAG ICLGTLAKVS
0901: DETFGAMGYT YTVIAVSLLC KITALRSFSL DKLHYWRESR AGMSSLAYFL AKDTVDHFNT IVKPLVYLSM FYFFNNPRST VTDNYVVLIC LVYCVTGIAY
1001: TLAILFEPGP AQLWSVLLPV VLTLIATSTN DNKIVDSISE LCYTRWALEA FVVSNAQRYK GVWLITRCGS LMENGYNIKH FPRCLVFLTL TGILSRCAAF
1101: FCMVTFQKK

Arabidopsis Description

ABCG28ABC transporter G family member 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF46]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.