Factsheet for TraesCS6A01G140300.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
plastid 4
peroxisome 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G168800.2	Wheat	plastid	96.61	96.34
TraesCS6D01G128600.1	Wheat	plastid	96.05	95.92
HORVU6Hr1G027440.10	Barley	plastid	87.59	89.61
TraesCS4A01G308200.1	Wheat	plastid	84.06	85.26
Os12t0411700-01	Rice	plastid	78.84	78.4
OQU84078	Sorghum	cytosol, plasma membrane	63.19	77.91
Zm00001d048621_P001	Maize	plastid	75.18	74.03
GSMUA_AchrUn_...	Banana	plasma membrane	53.31	63.64
GSMUA_Achr10P...	Banana	plasma membrane	36.11	61.24
GSMUA_Achr6P04180_001	Banana	plasma membrane	50.49	60.58
VIT_00s0822g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	20.17	58.85
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	43.86	58.68
GSMUA_AchrUn_...	Banana	plasma membrane	47.25	57.17
TraesCS2A01G110200.1	Wheat	plastid	53.17	56.18
TraesCS7A01G566200.1	Wheat	plasma membrane, plastid	54.58	56.01
TraesCS5A01G249900.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	57.26	55.39
Solyc11g009100.1.1	Tomato	cytosol, peroxisome, plasma membrane	49.93	54.55
PGSC0003DMT400041814	Potato	cytosol, peroxisome, plasma membrane	49.51	54.42
KRH42130	Soybean	plasma membrane	47.67	52.73
PGSC0003DMT400043270	Potato	cytosol	47.95	52.15
KRH18202	Soybean	cytosol, nucleus, plasma membrane, plastid	49.22	50.36
KRH18189	Soybean	cytosol, peroxisome, plasma membrane	48.8	50.22
KRH18182	Soybean	cytosol	47.25	49.56
KRH42131	Soybean	cytosol, nucleus, plasma membrane	48.8	49.5
KRH18205	Soybean	cytosol, peroxisome, plasma membrane	45.98	49.47
KRH18184	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	30.61	49.32
KRH42129	Soybean	cytosol, peroxisome, plasma membrane	47.11	49.26
KRH42133	Soybean	extracellular	48.24	49.21
KRH42128	Soybean	plasma membrane	42.74	48.64
KRH42124	Soybean	cytosol	45.27	47.49
KRH18181	Soybean	cytosol, peroxisome, plasma membrane	45.13	46.65
TraesCS2A01G374100.1	Wheat	plasma membrane	41.89	41.36
TraesCS1A01G164500.1	Wheat	cytosol	38.93	40.23
TraesCS1A01G126900.1	Wheat	nucleus, peroxisome, plasma membrane	38.36	39.48
KRH18188	Soybean	cytosol	34.13	38.11
TraesCS4A01G315900.1	Wheat	cytosol, peroxisome, plasma membrane	30.89	30.12
AT3G21080.1	Thale cress	cytosol, peroxisome, plasma membrane	9.87	27.45
TraesCS1A01G141400.1	Wheat	mitochondrion, plasma membrane	21.86	16.61
TraesCS2A01G049700.2	Wheat	plasma membrane	22.99	15.09
TraesCS6A01G395000.2	Wheat	plasma membrane, plastid	23.13	13.17

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF295	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G140300	EnsemblPlants:TraesCS6A01G140300.2	SEG:seg	:

Description

No Description!

Coordinates

chr6A:+:115270876..115278220

Molecular Weight (calculated)

77586.7 Da

IEP (calculated)

9.012

GRAVY (calculated)

0.119

Length

709 amino acids

Sequence
(BLAST)

001: MAVSSPLPRW APTPSPSRPL WLWGGGTPDA RTGSGGEGWS LGRIFPWASA WQRRAPAGVD GRGPAGFDGV EVAPSTRAAV APAPVRWAGT DEDPGVFLTW
101: EDVCVSVAAG AYGAQPVSIL SGITGHAGPG EVLAIMGPSG CGKTTLLDTL AGRLGPGITQ TGSILINGRR EKLAFGTSAY VTQDNVLMST MSVREAVYYS
201: AQLQLPGSMP AVEKRAHADA VIREMGLGDA MDTRIGGRMT KGISGGQRKR VTICIEMLTR PRLLFLDEPT SGLDSAASYH VMSHIARVAA REGMTVVAAV
301: HQPSGDVFDL FHRLCLLAYG RTVFFGPASD ANQFFTESGF PCPHLRNPSD HFLRTINKDF DEVEIVESSK ARRKTAAEAI EILTDAYQSP AYSEKTMDRI
401: AEMKGIGGAP FRKREQAGFS TKLFVLTRRS FVNMHRDIGY YWMRLGVYLG IGICLGTIFY QLGHSYSSIQ SRCEVIMYTT ALLTFMAIGG FPSFVEDVKV
501: FRRERLSGHY GVAEFVISNT LSATPYLAVI AVIPGAMLYY LTGLTKGPDR FAYFVVNLCM CTMLVESMMM IIAVIVPDFL MGIIVGAGVQ GVMMLNGGFF
601: RLPNELPKPV WKYPCYYISF HKYAVQGFYK NEFIGQTFPS DQLVEKNVTI SGLRVLQEKL QVEMGYSKWV NIAILCGMVV VYRVLFFAIV KIAEEVRPKL
701: RGMRCKLCK

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.