Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0822g00010.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 22.75 | 23.87 |
| AT3G21090.1 | Thale cress | cytosol, peroxisome, plasma membrane | 45.49 | 16.79 |
| AT1G51500.1 | Thale cress | cytosol, peroxisome, plasma membrane | 43.53 | 16.16 |
| GSMUA_Achr10P... | Banana | plasma membrane | 24.71 | 15.07 |
| KRH18184 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 25.49 | 14.77 |
| Solyc05g051530.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 28.63 | 13.77 |
| GSMUA_Achr6P04180_001 | Banana | plasma membrane | 31.76 | 13.71 |
| HORVU2Hr1G019010.2 | Barley | plasma membrane | 22.35 | 13.6 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 30.2 | 12.96 |
| Os12t0409700-00 | Rice | cytosol, peroxisome, plasma membrane | 20.78 | 12.47 |
| TraesCS2B01G128800.1 | Wheat | plasma membrane | 23.14 | 12.39 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 28.24 | 12.29 |
| TraesCS7B01G490800.1 | Wheat | peroxisome | 27.84 | 12.14 |
| KRH42130 | Soybean | plasma membrane | 30.2 | 12.01 |
| Os09t0125900-01 | Rice | plastid | 24.31 | 11.81 |
| AT1G17840.1 | Thale cress | cytosol, peroxisome, plasma membrane | 31.76 | 11.52 |
| Os09t0472200-00 | Rice | plasma membrane | 32.16 | 11.45 |
| Os09t0472100-01 | Rice | plasma membrane | 32.16 | 11.37 |
| KRH42129 | Soybean | cytosol, peroxisome, plasma membrane | 30.2 | 11.36 |
| AT1G51460.1 | Thale cress | plasma membrane | 30.2 | 11.36 |
| PGSC0003DMT400041814 | Potato | cytosol, peroxisome, plasma membrane | 28.63 | 11.32 |
| KRH18202 | Soybean | cytosol, nucleus, plasma membrane, plastid | 30.59 | 11.26 |
| Solyc11g009100.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 28.63 | 11.25 |
| KRH18182 | Soybean | cytosol | 29.8 | 11.24 |
| KRH42133 | Soybean | extracellular | 30.59 | 11.22 |
| KXG35822 | Sorghum | mitochondrion, nucleus, peroxisome, plasma membrane | 31.76 | 11.04 |
| TraesCS5B01G247700.1 | Wheat | nucleus, peroxisome, plasma membrane, plastid | 31.37 | 10.91 |
| TraesCS5B01G247800.1 | Wheat | plasma membrane, plastid | 31.37 | 10.91 |
| TraesCS5A01G249900.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 31.37 | 10.91 |
| KRH18189 | Soybean | cytosol, peroxisome, plasma membrane | 29.41 | 10.89 |
| TraesCS5B01G248000.1 | Wheat | plasma membrane, plastid | 30.98 | 10.82 |
| TraesCS5D01G257000.1 | Wheat | nucleus, peroxisome, plasma membrane, plastid | 30.98 | 10.78 |
| KRH42131 | Soybean | cytosol, nucleus, plasma membrane | 29.41 | 10.73 |
| TraesCS5D01G257100.2 | Wheat | nucleus, peroxisome, plasma membrane, plastid | 30.98 | 10.72 |
| TraesCS5D01G257400.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 30.59 | 10.64 |
| Zm00001d020811_P001 | Maize | nucleus, peroxisome, plasma membrane, plastid | 30.59 | 10.6 |
| HORVU5Hr1G070400.3 | Barley | cytosol, peroxisome | 31.37 | 10.6 |
| KXG34927 | Sorghum | plastid | 29.02 | 10.59 |
| TraesCS2A01G110200.1 | Wheat | plastid | 27.84 | 10.58 |
| TraesCS2B01G128400.1 | Wheat | plastid | 27.84 | 10.5 |
| TraesCS2D01G110700.1 | Wheat | plastid | 27.45 | 10.43 |
| Os09t0250800-00 | Rice | mitochondrion | 30.2 | 10.41 |
| TraesCSU01G100600.1 | Wheat | plastid | 28.24 | 10.39 |
| TraesCS7A01G566200.1 | Wheat | plasma membrane, plastid | 27.84 | 10.28 |
| KRH42128 | Soybean | plasma membrane | 25.1 | 10.27 |
| OQU84078 | Sorghum | cytosol, plasma membrane | 23.14 | 10.26 |
| TraesCSU01G100800.1 | Wheat | plastid | 27.84 | 10.25 |
| HORVU6Hr1G027440.10 | Barley | plastid | 27.84 | 10.25 |
| TraesCS2D01G110800.1 | Wheat | plastid | 27.06 | 10.18 |
| TraesCS4A01G308200.1 | Wheat | plastid | 27.84 | 10.16 |
| Os12t0411700-01 | Rice | plastid | 27.84 | 9.96 |
| Zm00001d019398_P001 | Maize | plastid | 27.06 | 9.96 |
| KXG19944 | Sorghum | plastid | 28.24 | 9.89 |
| Os07t0288700-02 | Rice | plastid | 28.24 | 9.88 |
| TraesCS6A01G140300.2 | Wheat | plastid | 27.45 | 9.87 |
| KRH18205 | Soybean | cytosol, peroxisome, plasma membrane | 25.49 | 9.86 |
| TraesCS6B01G168800.2 | Wheat | plastid | 27.45 | 9.85 |
| KRH42124 | Soybean | cytosol | 25.49 | 9.62 |
| Zm00001d048621_P001 | Maize | plastid | 27.06 | 9.58 |
| KRH18181 | Soybean | cytosol, peroxisome, plasma membrane | 25.49 | 9.48 |
| TraesCS6D01G128600.1 | Wheat | plastid | 26.27 | 9.44 |
| PGSC0003DMT400043270 | Potato | cytosol | 23.92 | 9.36 |
| TraesCS2B01G128700.1 | Wheat | plastid | 20.0 | 8.2 |
| Os10t0163290-00 | Rice | cytosol, endoplasmic reticulum, extracellular | 7.84 | 7.87 |
| HORVU2Hr1G018920.1 | Barley | cytosol | 14.12 | 7.05 |
| AT2G28070.1 | Thale cress | plastid | 18.43 | 6.44 |
| KRH18188 | Soybean | cytosol | 15.69 | 6.3 |
| TraesCS7B01G490700.1 | Wheat | plastid | 10.59 | 6.18 |
| AT1G53390.1 | Thale cress | plasma membrane | 16.86 | 3.88 |
| AT2G37010.1 | Thale cress | plasma membrane | 16.08 | 3.79 |
| AT5G60740.1 | Thale cress | plasma membrane | 15.69 | 3.61 |
Protein Annotations
| MapMan:35.1 | EntrezGene:821660 | UniProt:A0A178VEA2 | ProteinID:AEE76458.1 | EMBL:AK117839 | ArrayExpress:AT3G21080 |
| EnsemblPlantsGene:AT3G21080 | RefSeq:AT3G21080 | TAIR:AT3G21080 | RefSeq:AT3G21080-TAIR-G | EnsemblPlants:AT3G21080.1 | TAIR:AT3G21080.1 |
| ProteinID:BAB01451.1 | EMBL:BT006226 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| RefSeq:NP_188745.1 | ProteinID:OAP03232.1 | PO:PO:0000293 | PO:PO:0009047 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF338 |
| UniProt:Q9LJC4 | TMHMM:TMhelix | UniParc:UPI00000AC661 | SEG:seg | : | : |
Description
ABC transporter-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LJC4]
Coordinates
chr3:-:7388258..7390031
Molecular Weight (calculated)
28971.7 Da
IEP (calculated)
6.360
GRAVY (calculated)
-0.105
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MATHDFDFTD PYGNKDRKSL YSNQDNYFNN WSSLTQSEEV VEELSIQQTK YDHRSLPSLR TAEAEAAEWN ELERWGNQEL QHNGTRIRGI ITYKSGNLPG
101: VLSFSVIEIL MMVVASFVPN FLTGLFTGAG LIGIIMTSSG FSRLLPDLPK IFCRFSISYT ISYMIFGSWA IKLGHNNNFL GPLSPDEPKM TGEEMNMNEF
201: GVKVTHSGWW GFPEIVIAIL VCTWLLFFVA QKLKERARPA SRVIQAKVYF NVQLS
101: VLSFSVIEIL MMVVASFVPN FLTGLFTGAG LIGIIMTSSG FSRLLPDLPK IFCRFSISYT ISYMIFGSWA IKLGHNNNFL GPLSPDEPKM TGEEMNMNEF
201: GVKVTHSGWW GFPEIVIAIL VCTWLLFFVA QKLKERARPA SRVIQAKVYF NVQLS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.