Factsheet for TraesCSU01G100800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G100600.1	Wheat	plastid	99.71	99.71
TraesCS7B01G490800.1	Wheat	peroxisome	81.82	96.92
TraesCS7B01G490700.1	Wheat	plastid	57.58	91.3
TraesCS7A01G566200.1	Wheat	plasma membrane, plastid	86.72	86.98
KXG19944	Sorghum	plastid	82.54	78.57
Os10t0163290-00	Rice	cytosol, endoplasmic reticulum, extracellular	26.12	71.26
Os09t0125900-01	Rice	plastid	50.65	66.86
Os09t0250800-00	Rice	mitochondrion	70.13	65.68
GSMUA_AchrUn_...	Banana	plasma membrane	52.96	61.78
GSMUA_Achr6P04180_001	Banana	plasma membrane	51.23	60.07
GSMUA_Achr10P...	Banana	plasma membrane	35.93	59.57
VIT_00s0822g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	20.63	58.85
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	44.01	57.55
GSMUA_AchrUn_...	Banana	plasma membrane	47.04	55.63
PGSC0003DMT400041814	Potato	cytosol, peroxisome, plasma membrane	50.07	53.8
Solyc11g009100.1.1	Tomato	cytosol, peroxisome, plasma membrane	50.36	53.77
KRH42130	Soybean	plasma membrane	48.05	51.95
KRH18202	Soybean	cytosol, nucleus, plasma membrane, plastid	51.23	51.23
KRH42133	Soybean	extracellular	51.08	50.94
KRH18182	Soybean	cytosol	49.06	50.3
KRH18189	Soybean	cytosol, peroxisome, plasma membrane	49.93	50.22
KRH42131	Soybean	cytosol, nucleus, plasma membrane	50.36	49.93
PGSC0003DMT400043270	Potato	cytosol	46.75	49.69
KRH42129	Soybean	cytosol, peroxisome, plasma membrane	48.34	49.41
KRH18205	Soybean	cytosol, peroxisome, plasma membrane	45.74	48.1
KRH42128	Soybean	plasma membrane	43.15	47.99
KRH18184	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	30.16	47.5
KRH42124	Soybean	cytosol	44.88	46.01
KRH18181	Soybean	cytosol, peroxisome, plasma membrane	44.88	45.34
TraesCSU01G020100.1	Wheat	plasma membrane	43.0	41.62
KRH18188	Soybean	cytosol	35.93	39.21
AT3G21080.1	Thale cress	cytosol, peroxisome, plasma membrane	10.25	27.84
TraesCSU01G106900.1	Wheat	plasma membrane	24.39	15.93

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF432	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCSU01G100800	EnsemblPlants:TraesCSU01G100800.1	:	:

Description

No Description!

Coordinates

chrUn:-:88851556..88855649

Molecular Weight (calculated)

76896.0 Da

IEP (calculated)

8.496

GRAVY (calculated)

0.117

Length

693 amino acids

Sequence
(BLAST)

001: MATSLLPRWA PTPSQSQPRW GPSAASLTGE VQLLEPATSE VKGAMGSRHG ILSGVEGIDH REGRLEGIPS DGGVFITWED VWVTAVDRRA TILHGISGSA
101: RPGQVLAIMG PSGCGKTTLL DTLAGRLDKN LRSKGDIRIN GRRQRLAFGI SAYVTQENML MATLTVREAI YYSAQIQLPD TMLLADKLAR ADEAIQEMGL
201: TSTLDTRIGG HNTKGISGGQ RKRLSICLEI LTRPRLLFLD EPTSGLDSAA SFHVMNRTAD LAAREGMTIV AVVHQPCNEV FEIFHGLCLL ASGRTIYFGP
301: ATNANEFFSS NGYPCPPMRN PSDHFLRTIN RDFELESGER TISSKPSPAD EAIQVLVNAY KSSNTSENAK KEMQDINEMG GVMIRRNQAS FLTKVFVLTR
401: RSFVNMYRDV GYYWLRLGIY ISISLCLGTI YYNFGYGYDS IRSRSSMLMF TSGLLTLMAI GGFPSFVEEM KIFRRERLNG HYGVSAFVIS NWLSATPYLF
501: LIAILPGAIA YYLSGLKRRV DHFVYFTLVL CSCTMLVEGL MMTVAAIVPD FLMGIITGVG IQVIMLLNCG FFQIPSKLPK IVWKYPMFYI SFQKYALQGF
601: YKNEFLGLVF ENNTGVGKET ITGEEVISKL FETEMGHSKW VDFVVLCGMI VMYRLLFVVI IKVVDMLKPI SKGESFTCPA HCICGIEKPC TRI

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.