Factsheet for HORVU6Hr1G027440.10

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G140300.2	Wheat	plastid	89.61	87.59
TraesCS6B01G168800.2	Wheat	plastid	89.61	87.34
TraesCS6D01G128600.1	Wheat	plastid	89.47	87.32
OQU84078	Sorghum	cytosol, plasma membrane	64.36	77.57
Os12t0411700-01	Rice	plastid	74.89	72.79
Zm00001d048621_P001	Maize	plastid	73.16	70.42
GSMUA_AchrUn_...	Banana	plasma membrane	53.97	62.96
GSMUA_Achr10P...	Banana	plasma membrane	36.36	60.29
GSMUA_Achr6P04180_001	Banana	plasma membrane	51.23	60.07
VIT_00s0822g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	20.35	58.02
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	44.01	57.55
GSMUA_AchrUn_...	Banana	plasma membrane	47.76	56.48
HORVU2Hr1G019010.2	Barley	plasma membrane	33.04	54.65
PGSC0003DMT400041814	Potato	cytosol, peroxisome, plasma membrane	48.92	52.56
Solyc11g009100.1.1	Tomato	cytosol, peroxisome, plasma membrane	49.21	52.54
KRH42130	Soybean	plasma membrane	47.19	51.01
HORVU5Hr1G070400.3	Barley	cytosol, peroxisome	55.41	50.86
KRH18205	Soybean	cytosol, peroxisome, plasma membrane	47.04	49.47
PGSC0003DMT400043270	Potato	cytosol	46.18	49.08
KRH18202	Soybean	cytosol, nucleus, plasma membrane, plastid	48.92	48.92
KRH18189	Soybean	cytosol, peroxisome, plasma membrane	48.34	48.62
KRH18182	Soybean	cytosol	47.33	48.52
KRH42129	Soybean	cytosol, peroxisome, plasma membrane	47.19	48.23
HORVU2Hr1G018920.1	Barley	cytosol	35.5	48.14
KRH42131	Soybean	cytosol, nucleus, plasma membrane	48.34	47.93
KRH42133	Soybean	extracellular	47.91	47.77
KRH42128	Soybean	plasma membrane	42.86	47.67
KRH18184	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	30.01	47.27
KRH42124	Soybean	cytosol	44.44	45.56
KRH18181	Soybean	cytosol, peroxisome, plasma membrane	44.73	45.19
HORVU1Hr1G030200.1	Barley	nucleus, peroxisome, plasma membrane	39.54	39.77
HORVU2Hr1G090960.2	Barley	cytosol	41.99	38.49
KRH18188	Soybean	cytosol	33.62	36.69
HORVU4Hr1G041540.11	Barley	plastid	11.69	36.16
HORVU5Hr1G125010.1	Barley	cytosol, peroxisome, plasma membrane, plastid	31.17	29.88
AT3G21080.1	Thale cress	cytosol, peroxisome, plasma membrane	10.25	27.84
HORVU7Hr1G122580.37	Barley	endoplasmic reticulum, vacuole	22.37	17.67
HORVU6Hr1G091510.2	Barley	mitochondrion	24.1	16.0
HORVU1Hr1G037250.2	Barley	plasma membrane	21.64	14.73

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A287TNY7	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:HORVU6Hr1G027440
EnsemblPlants:HORVU6Hr1G027440.10	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF295	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI000B47AC05	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:107463781..107470284

Molecular Weight (calculated)

76037.4 Da

IEP (calculated)

9.483

GRAVY (calculated)

0.172

Length

693 amino acids

Sequence
(BLAST)

001: GRLVAAAAVG AHAEPVAAAL ALGRRYARRA NRCLQRRRWR GLVARQNIPV GERLGVEAAP TRAAVAPAPT RWAGTEDDPG VFLTWEDVCV TVAGGAYGAQ
101: PVSILSGITG HAGPGEVLAI MGPSGCGKTT LLDTLAGRLG PGITQTGLIL INGRREKLAF GTSAYVTQDN VLMSTMSVRE AVYYSAQLQL PGSMPAAEKR
201: AHADAVIQEM GLGDAMDTRI GGQMTKGISG GQRKRVTICV EMLTRPRLLF LDEPTSGLDS AASYHVMSHI TRVAAREGMT VVAAVHQPSG DVFDLFHRLC
301: LLAYSRTVFF GPAANATKFF TECGFPCPHL RNPSDHFLRT INKDFDEEIV ESSKASRKTA AEAIKILTDA YQSPAYSEKI MDRIAEMKGI GGAPFRKREQ
401: ASFSAKLFVL TRRSFVNMHR DIGYYWMRLG VYLGIGICLG TIFYQVGHSY SSIQSRCEVI MYTTALLTFM AIGGFPSFVE DVKVFRRERL SGHYGVAEFV
501: ISNTLSATPY VAVIAVIPGA MLYYLTGLTK GPDRFAYFVV NLCMCTLLVE SMMMIIAAIV PDFLMGIIVG AGVQGVMMLN GGFFRLPNEL PKPVWKYPCY
601: YISFHKYAVQ GFYKNEFIGL TFPSDQLVEK NVTISGLRVL QEKLQVEMGY SKWVNIAILC GMMVVYRVMF FAIVKIVEEV RPKLRGMRCK LCK

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.