Factsheet for Os12t0411700-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
plastid 3
plasma membrane 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84078	Sorghum	cytosol, plasma membrane	63.81	79.13
TraesCS6D01G128600.1	Wheat	plastid	78.54	78.87
TraesCS6A01G140300.2	Wheat	plastid	78.4	78.84
TraesCS6B01G168800.2	Wheat	plastid	78.54	78.76
Os12t0409700-00	Rice	cytosol, peroxisome, plasma membrane	46.0	77.18
Zm00001d048621_P001	Maize	plastid	76.3	75.56
HORVU6Hr1G027440.10	Barley	plastid	72.79	74.89
TraesCS4A01G308200.1	Wheat	plastid	73.21	74.68
GSMUA_AchrUn_...	Banana	plasma membrane	52.17	62.63
Os10t0163290-00	Rice	cytosol, endoplasmic reticulum, extracellular	21.74	61.02
GSMUA_Achr10P...	Banana	plasma membrane	35.2	60.05
GSMUA_Achr6P04180_001	Banana	plasma membrane	49.23	59.39
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	42.64	57.36
VIT_00s0822g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	19.5	57.2
GSMUA_AchrUn_...	Banana	plasma membrane	45.72	55.63
Os09t0472100-01	Rice	plasma membrane	56.1	55.48
Os09t0250800-00	Rice	mitochondrion	57.08	55.0
Os09t0472200-00	Rice	plasma membrane	54.98	54.75
Os07t0288700-02	Rice	plastid	54.56	53.36
PGSC0003DMT400041814	Potato	cytosol, peroxisome, plasma membrane	47.83	52.87
Solyc11g009100.1.1	Tomato	cytosol, peroxisome, plasma membrane	47.83	52.54
Os09t0125900-01	Rice	plastid	38.01	51.62
KRH42130	Soybean	plasma membrane	46.14	51.33
PGSC0003DMT400043270	Potato	cytosol	46.7	51.07
KRH42129	Soybean	cytosol, peroxisome, plasma membrane	47.12	49.56
KRH18205	Soybean	cytosol, peroxisome, plasma membrane	45.72	49.47
KRH18182	Soybean	cytosol	46.84	49.41
KRH18202	Soybean	cytosol, nucleus, plasma membrane, plastid	47.83	49.21
KRH18189	Soybean	cytosol, peroxisome, plasma membrane	47.41	49.06
KRH42131	Soybean	cytosol, nucleus, plasma membrane	47.97	48.93
KRH42133	Soybean	extracellular	46.98	48.2
KRH18184	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	29.45	47.73
KRH42128	Soybean	plasma membrane	41.66	47.67
KRH42124	Soybean	cytosol	42.92	45.27
KRH18181	Soybean	cytosol, peroxisome, plasma membrane	43.06	44.75
Os04t0528300-01	Rice	plasma membrane	43.48	43.6
Os10t0494300-01	Rice	extracellular, plasma membrane	43.62	43.02
Os05t0222200-01	Rice	nucleus, peroxisome, plasma membrane	37.87	38.57
KRH18188	Soybean	cytosol	33.52	37.64
Os03t0859500-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	30.86	30.6
AT3G21080.1	Thale cress	cytosol, peroxisome, plasma membrane	9.96	27.84
Os10t0442900-01	Rice	plasma membrane	20.9	16.61
Os06t0731200-01	Rice	plasma membrane	21.88	15.68
Os11t0416900-01	Rice	plasma membrane	24.12	15.62
Os04t0194500-01	Rice	plasma membrane	22.86	15.31

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	EntrezGene:4352063	InterPro:AAA+_ATPase	ProteinID:ABA97862.2	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EMBL:AK067639	ProteinID:BAF29663.1	ProteinID:BAT16865.1	ProteinID:BAT16866.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
EnsemblPlantsGene:Os12g0411700	EnsemblPlants:Os12t0411700-01	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF295	UniProt:Q2QT07	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0000D89D3F	RefSeq:XP_015618591.1	SEG:seg	:	:

Description

ABC TRANSPORTER G FAMILY MEMBER 30ABC transporter-like domain containing protein. (Os12t0411700-01);Similar to white-brown-complex ABC transporter family. (Os12t0411700-02)

Coordinates

chr12:-:12568930..12587004

Molecular Weight (calculated)

79106.7 Da

IEP (calculated)

9.538

GRAVY (calculated)

0.084

Length

713 amino acids

Sequence
(BLAST)

001: MAATSPLPRW APTPSPSRPL WRWGWGGGAT PDARADGGVT GWTSSFFAAV FPWTRRRRVD DRWAPSAGGG VGTFDGVEVP LPAAQAVSLP RAAADVVDDP
101: AVFLTWEDVR VTVPGRTRGS PPARILDGIT GHARPGEVLA IMGPSGCGKT TLLDTLAGRL GQEMNQTGVI LINGRQEKLA FGTSAYVTQD NVLMSTLSVR
201: EAVYYSAHLQ LPDTMLASEK RAHAERVIRE MGLSDTMDTR IGGRITKGIS GGQRKRMSIC IEMLTRPRLL FLDEPTSGLD SAASYHVMSH ITRVAAREGM
301: TVIAAVHQPS GDVFDLFHGL LLLAYGRMVF FGTVSNATEF FTQSGFPCPH LRNPSDHFLR TINKDFDEGT MESSKANRKT AAEATNILTN AYHSTYSEKT
401: ANEIVEMKGM GGTPFRRKEQ ASFLTKLLVL TRRSFLNMHR DIGYYWMRLG IYLGIGICLG TIFYQVGYSY SSIQSRCEVI MYTTALVTFM AIGGFPSFVE
501: DIKLFRRERL SGHYGVMEFV ISNTLSATPY LAVIAVIPGA MMYYLTGLTR GAEHFAYFVA TLCMCTLLVE SMMMIIAVIV PDFLMGIIIG AGIQGMMMLN
601: GGFFRLPNEL PKPVWKYPCY YISFHKYAVQ GFYKNEFIGL SFPSDQLIEA NATISGLQVL KERLQVEMGY SKWVNLAILF GMMVTYRMIF FVIVKIAEEL
701: RLKLRGIRFR RLK

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.