Factsheet for Os04t0528300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 18260611
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002871_P001	Maize	cytosol, peroxisome, plasma membrane	94.23	92.93
TraesCSU01G020100.1	Wheat	plasma membrane	93.39	92.74
TraesCS2A01G374100.1	Wheat	plasma membrane	93.53	92.62
OQU82009	Sorghum	mitochondrion	94.09	85.77
HORVU2Hr1G090960.2	Barley	cytosol	90.44	85.05
TraesCS2D01G370400.2	Wheat	plastid	92.83	85.05
GSMUA_Achr5P10800_001	Banana	cytosol, peroxisome, plasma membrane	77.78	79.8
GSMUA_Achr5P19820_001	Banana	cytosol, peroxisome, plasma membrane	73.42	78.26
VIT_16s0039g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	77.07	77.73
KRH38814	Soybean	cytosol, peroxisome, plasma membrane	77.07	77.51
KRH09311	Soybean	cytosol, peroxisome, plasma membrane	76.93	77.48
Os10t0494300-01	Rice	extracellular, plasma membrane	78.2	76.9
Solyc03g019760.2.1	Tomato	nucleus	75.67	75.77
PGSC0003DMT400039496	Potato	cytosol, peroxisome, plasma membrane	74.96	75.39
AT1G17840.1	Thale cress	cytosol, peroxisome, plasma membrane	74.12	74.96
CDY19179	Canola	cytosol, peroxisome, plasma membrane	70.75	74.41
CDY26211	Canola	cytosol, peroxisome, plasma membrane	70.6	74.26
Bra025944.1-P	Field mustard	cytosol, peroxisome, plasma membrane	70.32	73.96
Bra016584.1-P	Field mustard	cytosol, peroxisome, plasma membrane	72.86	73.89
CDX83888	Canola	cytosol, peroxisome, plasma membrane	70.18	73.49
CDX96749	Canola	cytosol, peroxisome, plasma membrane	69.9	73.41
PGSC0003DMT400069344	Potato	plasma membrane	28.69	72.34
Solyc06g072090.1.1	Tomato	cytosol, plasma membrane, plastid	65.68	70.76
PGSC0003DMT400069337	Potato	cytosol, peroxisome, plastid	62.59	67.84
Solyc06g072100.1.1	Tomato	cytosol, peroxisome, plasma membrane	66.81	66.43
Os05t0222200-01	Rice	nucleus, peroxisome, plasma membrane	51.76	52.57
Os10t0163290-00	Rice	cytosol, endoplasmic reticulum, extracellular	18.28	51.18
Os12t0409700-00	Rice	cytosol, peroxisome, plasma membrane	27.85	46.59
Os09t0472100-01	Rice	plasma membrane	45.43	44.8
Os09t0472200-00	Rice	plasma membrane	44.59	44.27
Os12t0411700-01	Rice	plastid	43.6	43.48
Os07t0288700-02	Rice	plastid	43.04	41.98
Os09t0250800-00	Rice	mitochondrion	43.04	41.35
Os09t0125900-01	Rice	plastid	27.14	36.76
Os03t0859500-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	32.63	32.27
Os10t0442900-01	Rice	plasma membrane	22.08	17.5
Os04t0194500-01	Rice	plasma membrane	23.07	15.4
Os06t0731200-01	Rice	plasma membrane	21.24	15.18
Os11t0416900-01	Rice	plasma membrane	23.49	15.17

Protein Annotations

MapMan:21.9.4.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	EntrezGene:4336468	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:BAF15289.1	ProteinID:BAS90182.1	ProteinID:BAS90184.1	ProteinID:BAS90185.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0015245
GO:GO:0015908	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	InterPro:IPR003439	EnsemblPlantsGene:Os04g0528300	EnsemblPlants:Os04t0528300-01	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF271	UniProt:Q0JBJ8
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0000DD91B0	RefSeq:XP_015636983.1	SEG:seg

Description

ABC TRANSPORTER G FAMILY MEMBER 9Similar to ABC transporter. (Os04t0528300-01);Similar to OSIGBa0115K01-H0319F09.18 protein. (Os04t0528300-02);Similar to OSIGBa0115K01-H0319F09.18 protein. (Os04t0528300-03)

Coordinates

chr4:+:26395912..26401436

Molecular Weight (calculated)

78426.5 Da

IEP (calculated)

9.189

GRAVY (calculated)

0.141

Length

711 amino acids

Sequence
(BLAST)

001: MRAGGGGGGD TRRTAAGQAM VELQANASSA GGGMVVGLSP LSETLWRDSK AMPGAAAALI GDVSARLTWK DLSVTVALGP GKTQTVLDEL TGYAEPGSLT
101: ALMGPSGSGK STLLDALAGR LAANAFLSGN VLLNGRKAKL SFGAAAYVTQ DDNLIGTLTV RETIGYSAML RLPDKMPRED KRALVEGTIV EMGLQDCADT
201: VIGNWHLRGV SGGEKRRVSI ALELLMRPRL LFLDEPTSGL DSSSAFFVTQ TLRGLARDGR TVIASIHQPS SEVFELFDML FLLSSGKTVY FGQASQACEF
301: FAQTGFPCPP LRNPSDHFLR CVNSDFDKVK ATLKGSMKAR IERSDDPLDR MTTSEAIRKL VASYSRSQYY YAARERVNDI SRLKGTVLDS GGSQASFLMQ
401: AGTLTKRSFI NMSRDFGYYW LRLLIYLLVT VCIGTIYYDV GTKYTSILAR AACTAFVFGF VTFMSIGGFP SFVEEMKVFQ RERLNGHYGV AAFVISNTIS
501: ALPFLVLICF LSGTICYFMV RLHPGFSHYI FFVLNLYASV TVVESLMMAI ASVIPNFLMG IIIGAGIQGI FMLVSGYFRL PYDIPKPVWR YPMQYISFHY
601: WALQGQCQND MDGLVFDNQY PDQPKIPGDF ILKYIFQINV HRSKWIDLSV IFSMIFIYRI LFFLMIKVNE DALPWIRGYI ARKRLQKKEP LGKTPSLRGY
701: VVDPELGPNE S

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.