Factsheet for TraesCS2D01G370400.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G020100.1	Wheat	plasma membrane	91.62	99.3
TraesCS2A01G374100.1	Wheat	plasma membrane	91.49	98.89
Os04t0528300-01	Rice	plasma membrane	85.05	92.83
HORVU2Hr1G090960.2	Barley	cytosol	88.02	90.34
Zm00001d002871_P001	Maize	cytosol, peroxisome, plasma membrane	83.76	90.15
OQU82009	Sorghum	mitochondrion	86.73	86.28
GSMUA_Achr5P10800_001	Banana	cytosol, peroxisome, plasma membrane	69.85	78.21
GSMUA_Achr5P19820_001	Banana	cytosol, peroxisome, plasma membrane	66.75	77.66
TraesCS1D01G161500.2	Wheat	cytosol, peroxisome, plasma membrane	71.26	77.23
VIT_16s0039g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	69.46	76.45
KRH09311	Soybean	cytosol, peroxisome, plasma membrane	68.81	75.64
KRH38814	Soybean	cytosol, peroxisome, plasma membrane	68.69	75.39
Solyc03g019760.2.1	Tomato	nucleus	68.3	74.65
AT1G17840.1	Thale cress	cytosol, peroxisome, plasma membrane	67.4	74.4
PGSC0003DMT400039496	Potato	cytosol, peroxisome, plasma membrane	67.65	74.26
CDY19179	Canola	cytosol, peroxisome, plasma membrane	64.56	74.11
CDY26211	Canola	cytosol, peroxisome, plasma membrane	64.3	73.82
Bra025944.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.05	73.52
Bra016584.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.37	73.47
CDX83888	Canola	cytosol, peroxisome, plasma membrane	64.18	73.34
CDX96749	Canola	cytosol, peroxisome, plasma membrane	63.92	73.26
PGSC0003DMT400069344	Potato	plasma membrane	26.16	71.99
Solyc06g072090.1.1	Tomato	cytosol, plasma membrane, plastid	59.15	69.55
PGSC0003DMT400069337	Potato	cytosol, peroxisome, plastid	56.19	66.46
TraesCS1D01G150800.1	Wheat	cytosol, peroxisome, plasma membrane	61.47	66.25
Solyc06g072100.1.1	Tomato	cytosol, peroxisome, plasma membrane	60.18	65.31
TraesCS1D01G126600.1	Wheat	nucleus, peroxisome, plasma membrane	45.36	51.09
TraesCS5D01G257000.1	Wheat	nucleus, peroxisome, plasma membrane, plastid	41.75	44.2
TraesCS5D01G257100.2	Wheat	nucleus, peroxisome, plasma membrane, plastid	41.75	43.96
TraesCS5D01G257400.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	40.72	43.11
TraesCS2D01G110800.1	Wheat	plastid	36.98	42.33
TraesCS2D01G110700.1	Wheat	plastid	36.6	42.32
TraesCS6D01G128600.1	Wheat	plastid	38.53	42.11
TraesCS5D01G551400.1	Wheat	cytosol, peroxisome, plasma membrane	29.9	32.04
TraesCS2D01G048800.1	Wheat	plasma membrane	22.42	16.08
TraesCS1D01G140400.1	Wheat	plasma membrane	20.23	15.32
TraesCS6D01G380300.1	Wheat	plasma membrane	22.16	14.35

Protein Annotations

MapMan:21.9.4.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF271
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2D01G370400	EnsemblPlants:TraesCS2D01G370400.2	TIGR:cd03213
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:474747175..474751899

Molecular Weight (calculated)

85139.6 Da

IEP (calculated)

9.295

GRAVY (calculated)

0.134

Length

776 amino acids

Sequence
(BLAST)

001: MHALPSSFIT PALLPPSLPP SYSSSQQLNT SLTSHRTASH RPASPSEESS RASPPVRARA MRGGGGGGGG EDTRRTAAGQ AMVELQANGA TATSASGAMV
101: VGLSPLSETL WRDSKAMPGA GAAALIGEVS ARLTWKDLSV TVALGPGKTQ TVLDELTGFA EPGSLTALMG PSGSGKSTLL DALAGRLAAN AFLSGSVLLN
201: GRKAKLSFGA AAYVTQDDNL IGTLTVRETI GYSALLRLPD KMPRDDKRAL VEGTIVEMGL QDCADTVIGN WHLRGVSGGE KRRVSIALEL LMRPRLLFLD
301: EPTSGLDSSS AFFVTQTLRG LARDGRTVIA SIHQPSSEVF ELFDMLFLLS GGKNVYFGQA AQACEFFAEV GFPCPPLRNP SDHFLRCVNS DFDKVKATLK
401: GSMKIERSDD PLDKITTSEA IRKLVSAYNR SQYYYAAREK VNDIARIKGT VMDSRGSQAS FLMQACTLTR RSFINMSRDF GYYWLRLLIY LLVTVCIGTI
501: YLDVGTKYTS ILARAACAAF VFGFVTFMSI GGFPSFVEEM KVFQRERLNG HYGVAAFVIA NTISALPFLV LICFMSGTVC YFMVRLHPGF THYIFFVLNL
601: YASVTVVESL MMAIASVIPN FLMGIIIGAG IQGIFMLVSG YFRLPYDIPK VFWRYPMQYI SFHYWALQGQ CQNDMDGLLF DNQYPDQPKI PGEFILKYIF
701: QINVHRSKWI DLSVIFSMIF IYRLLFFIMI KVNEDVMPWI RGYIARKRLQ KKVPAIGKTP SLRGYVVDPE LGPNEG

Best Arabidopsis Sequence Match ( AT3G21090.1 )
(BLAST)

001: MELEGSSSGR RQLPSKLEMS RGAYLAWEDL TVVIPNFSDG PTRRLLQRLN GYAEPGRIMA IMGPSGSGKS TLLDSLAGRL ARNVVMTGNL LLNGKKARLD
101: YGLVAYVTQE DVLLGTLTVR ETITYSAHLR LPSDMSKEEV SDIVEGTIME LGLQDCSDRV IGNWHARGVS GGERKRVSIA LEILTRPQIL FLDEPTSGLD
201: SASAFFVIQA LRNIARDGRT VISSVHQPSS EVFALFDDLF LLSSGESVYF GEAKSAVEFF AESGFPCPKK RNPSDHFLRC INSDFDTVTA TLKGSQRIQE
301: TPATSDPLMN LATSVIKARL VENYKRSKYA KSAKSRIREL SNIEGLEMEI RKGSEATWWK QLRTLTARSF INMCRDVGYY WTRIISYIVV SISVGTIFYD
401: VGYSYTSILA RVSCGGFITG FMTFMSIGGF PSFLEEMKVF YKERLSGYYG VSVYILSNYI SSFPFLVAIS VITGTITYNL VKFRPGFSHY AFFCLNIFFS
501: VSVIESLMMV VASVVPNFLM GLITGAGLIG IIMMTSGFFR LLPDLPKIFW RYPVSYISYG SWAIQGGYKN DFLGLEFEPL FPGEPKMTGE EVIEKVFGVK
601: VTYSKWWDLA AVVAILVCYR LLFFVVLKLR ERAGPALKAI QAKRTMRNLD RRPSFKRMPS LSLSLSSMSS RRHQPLRSLS SQEGLNSPIH Y

Arabidopsis Description

ABCG15ABC transporter G family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWI9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.