Factsheet for TraesCS1D01G150800.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G161500.2	Wheat	cytosol, peroxisome, plasma membrane	85.0	85.47
TraesCS1B01G181300.2	Wheat	cytosol, peroxisome, plasma membrane	84.03	84.5
Os10t0494300-01	Rice	extracellular, plasma membrane	77.36	77.04
KXG38261	Sorghum	cytosol, peroxisome, plasma membrane	75.56	76.19
Zm00001d013960_P001	Maize	cytosol, peroxisome, plasma membrane	72.92	73.94
TraesCS1A01G164500.1	Wheat	cytosol	69.03	72.45
GSMUA_Achr5P10800_001	Banana	cytosol, peroxisome, plasma membrane	69.17	71.86
Zm00001d032601_P002	Maize	cytosol, peroxisome, plasma membrane	72.36	70.79
KRH38814	Soybean	cytosol, peroxisome, plasma membrane	69.17	70.44
GSMUA_Achr5P19820_001	Banana	cytosol, peroxisome, plasma membrane	65.14	70.31
KRH09311	Soybean	cytosol, peroxisome, plasma membrane	68.75	70.11
VIT_16s0039g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	66.94	68.37
PGSC0003DMT400039496	Potato	cytosol, peroxisome, plasma membrane	66.25	67.47
Solyc03g019760.2.1	Tomato	nucleus	66.53	67.46
AT1G17840.1	Thale cress	cytosol, peroxisome, plasma membrane	65.28	66.86
Bra016584.1-P	Field mustard	cytosol, peroxisome, plasma membrane	63.61	65.34
CDY26211	Canola	cytosol, peroxisome, plasma membrane	60.97	64.94
CDY19179	Canola	cytosol, peroxisome, plasma membrane	60.83	64.79
Bra025944.1-P	Field mustard	cytosol, peroxisome, plasma membrane	60.69	64.64
CDX96749	Canola	cytosol, peroxisome, plasma membrane	60.56	64.4
CDX83888	Canola	cytosol, peroxisome, plasma membrane	60.56	64.21
TraesCS2D01G370400.2	Wheat	plastid	66.25	61.47
PGSC0003DMT400069337	Potato	cytosol, peroxisome, plastid	55.83	61.28
Solyc06g072090.1.1	Tomato	cytosol, plasma membrane, plastid	55.69	60.76
Solyc06g072100.1.1	Tomato	cytosol, peroxisome, plasma membrane	56.94	57.34
PGSC0003DMT400069344	Potato	plasma membrane	21.25	54.26
TraesCS1D01G126600.1	Wheat	nucleus, peroxisome, plasma membrane	41.39	43.25
TraesCS5D01G257400.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	38.89	38.2
TraesCS5D01G257000.1	Wheat	nucleus, peroxisome, plasma membrane, plastid	38.33	37.65
TraesCS5D01G257100.2	Wheat	nucleus, peroxisome, plasma membrane, plastid	38.47	37.58
TraesCS6D01G128600.1	Wheat	plastid	36.67	37.18
TraesCS2D01G110700.1	Wheat	plastid	33.89	36.36
TraesCS2D01G110800.1	Wheat	plastid	33.89	35.99
TraesCS5D01G551400.1	Wheat	cytosol, peroxisome, plasma membrane	29.17	29.01
TraesCS6D01G380300.1	Wheat	plasma membrane	22.64	13.59
TraesCS1D01G140400.1	Wheat	plasma membrane	19.31	13.56
TraesCS2D01G048800.1	Wheat	plasma membrane	20.14	13.4

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR000048	InterPro:IPR003439	InterPro:IQ_motif_EF-hand-BS
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50096	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF271	SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G150800	EnsemblPlants:TraesCS1D01G150800.1
TIGR:cd03213	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:208742475..208751990

Molecular Weight (calculated)

79768.1 Da

IEP (calculated)

8.800

GRAVY (calculated)

0.076

Length

720 amino acids

Sequence
(BLAST)

001: MKKGGAGTAK EAAAAVGQVK AELEDVGKAA GRAVAVAAAA ALSPLSETLW REKAAVEFLG DVSARLAWRD LTVTVALGSG DTQAVLQALT GYAEPGTITA
101: LMGPSGLKAP ASLDALAGRL AANAFLSGTI LLNGRKANLS FGAVAYVTQD DNLIGTLTVR ETISYSARLR LPDNMPMEEK RALVEGTIVE MGLQDCADTV
201: IGNWHLRGVS GGEKRRVSIA LEILMRPRLL FLDEPTSGLD SASAFFVTQT LRGLARDGRT VIASIHQPSS EVFELFDRLY LLSGGKTVYF GQASEACEFF
301: AQAGFPCPPL RNPSDHFLRC INADFDKVKA TLKGSMKMRF ERSDDPLERI TTSDAIRRLF SYYQHSQHYL TARQKVDEMA RLKGTVLDAG GEPGQLWDAG
401: LHAHQAIVRQ HVEGLWVLLA EACHLHRGHR LHWVHIPQCR HQIQLHPGTG RVRVLHLRLR HVHVDRRVPV FRGGHEGIPE GAAERALRRA GVLAFVISNT
501: LSAMPFLILI TFLSGTLCYF MVRLHPGFMH YVFFLLCLYA SVTVVESLMM AIASIIPNFL MGIIIGAGIQ GIFMLVSGYF RLPHDIPKPF WRYPMSYISF
601: HYWALQGQYQ NDLVGLVFDN QDEELPKIPG EYILENVFQI DVSRSKWLDL SVLFGMIVIY RLLFFAMIKV SEDVTPWVRG YMARRRVQHK RREAELAMVR
701: TPSLRGYVVD AAPELPADHP

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.