Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- golgi 4
- plasma membrane 6
- endoplasmic reticulum 5
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G141400.1 | Wheat | mitochondrion, plasma membrane | 86.63 | 95.18 |
| TraesCS1B01G157900.1 | Wheat | endoplasmic reticulum | 73.76 | 95.09 |
| HORVU1Hr1G037250.2 | Barley | plasma membrane | 94.34 | 94.99 |
| Zm00001d032855_P002 | Maize | plasma membrane | 66.93 | 77.69 |
| OQU91719 | Sorghum | plasma membrane | 69.56 | 76.67 |
| Os10t0442900-01 | Rice | plasma membrane | 66.63 | 76.14 |
| TraesCS2D01G048800.1 | Wheat | plasma membrane | 52.98 | 50.18 |
| TraesCS6D01G380300.1 | Wheat | plasma membrane | 53.56 | 45.79 |
| TraesCS5D01G257400.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 16.29 | 22.78 |
| TraesCS5D01G257100.2 | Wheat | nucleus, peroxisome, plasma membrane, plastid | 16.29 | 22.66 |
| TraesCS5D01G257000.1 | Wheat | nucleus, peroxisome, plasma membrane, plastid | 16.2 | 22.65 |
| TraesCS1D01G126600.1 | Wheat | nucleus, peroxisome, plasma membrane | 14.93 | 22.21 |
| TraesCS6D01G128600.1 | Wheat | plastid | 15.32 | 22.11 |
| TraesCS2D01G110700.1 | Wheat | plastid | 14.44 | 22.06 |
| TraesCS2D01G110800.1 | Wheat | plastid | 14.54 | 21.98 |
| TraesCS1D01G161500.2 | Wheat | cytosol, peroxisome, plasma membrane | 15.22 | 21.79 |
| TraesCS2D01G370400.2 | Wheat | plastid | 15.32 | 20.23 |
| TraesCS1D01G150800.1 | Wheat | cytosol, peroxisome, plasma membrane | 13.56 | 19.31 |
| TraesCS5D01G551400.1 | Wheat | cytosol, peroxisome, plasma membrane | 12.98 | 18.37 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | GO:GO:0016887 |
| InterPro:IPR003439 | InterPro:P-loop_NTPase | PFAM:PF00005 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 |
| PANTHER:PTHR19241:SF461 | SMART:SM00382 | SUPFAM:SSF52540 | SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS1D01G140400 |
| EnsemblPlants:TraesCS1D01G140400.1 | TIGR:cd03213 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1D:+:193415929..193432432
Molecular Weight (calculated)
113035.0 Da
IEP (calculated)
8.835
GRAVY (calculated)
-0.085
Length
1025 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLPAPLAAVL LLPLVLALLP AGGRCQQGDD NPGPGVRHRA LPPSASSAAS EALMARMYTV GQELADEVQS KYGFCMSNVN NDFNQTFNFT SDPSFISDCN
0101: EQTQGTLVAM MCSKAEIELY LSSLGSKSIV RISRNCNQFS WAPGCQSGWA CSAPDANSLT NNSFENPVPS RSENCRPCCP GFFCPRGLTC MMPCPLGAYC
0201: PLGTLNKTTN LCDPYSYQIT PGSNQTCGSA DSWADVITTN DVFCPPGHHC PTTTQKFNCS KGSYCRKGST GENKCGWKSR CKGNSEKENI TLFGGILIVV
0301: LIVILLLVYN CSDQFIAVRA KISSKSRKKA AKIAQESATA RKRWKLAKEL VLRHEVEMYE SSDAPEELAT SSDGILHADK GNGKRSKSRR KLNVRTERFR
0401: RAYSQIDKER ALQLDKDKLT LSGIVSRAAE NRPQRPMLEV AFKGLTLSIG KKKLLQCVTG KLSPGRITAI MGPSGAGKTT FLNAVLGKTS GYKKDGLVLV
0501: NGKSGSMQSY KKIIGFVPQD DIVHGNLTVE ENLWFSGCCR LSKSMSKADK VLILERVIGS LGLQEIRNSL VGTVEKRGIS GGQRKRVNVG IEMVMEPSLL
0601: ILDEPTTGLD SASSQQLLRA LRYEASQGVN VCAVIHQPSY TLFNMFDDFV LLARGGLIAY HGPISEVENY FSGLGIKVPD RENPPDYYID ILEGIAKTKM
0701: RGHATPKHLP LLWILHNGYE VPEDMQKDLE EINMMHELYT VGSITRELSS VEQTKSKDSV HQNVSQRNDL LNRKTPGVLA QYRYYLGRVA KQRLREATQQ
0801: AVDYLILCIA GICIGTITKV NDDTLGAASY GYTIIAVSLL CQLAALRSFS PERLQYWRER ESGMSSVAYF LARDTIDHFN TVVKPIVFLS TFYFFNNPRS
0901: TLRDNYLVLL ALVYCVTGIG YTLAIWFELG LAQLCSALLP VVLVLVGTDP KFPQFIKQFC YPKWTLEAFI VAGAKNYSGV WLITRCGALL KGGYDINYFA
1001: LCIAIMMLNG VLFRFVALLS LLKLR
0101: EQTQGTLVAM MCSKAEIELY LSSLGSKSIV RISRNCNQFS WAPGCQSGWA CSAPDANSLT NNSFENPVPS RSENCRPCCP GFFCPRGLTC MMPCPLGAYC
0201: PLGTLNKTTN LCDPYSYQIT PGSNQTCGSA DSWADVITTN DVFCPPGHHC PTTTQKFNCS KGSYCRKGST GENKCGWKSR CKGNSEKENI TLFGGILIVV
0301: LIVILLLVYN CSDQFIAVRA KISSKSRKKA AKIAQESATA RKRWKLAKEL VLRHEVEMYE SSDAPEELAT SSDGILHADK GNGKRSKSRR KLNVRTERFR
0401: RAYSQIDKER ALQLDKDKLT LSGIVSRAAE NRPQRPMLEV AFKGLTLSIG KKKLLQCVTG KLSPGRITAI MGPSGAGKTT FLNAVLGKTS GYKKDGLVLV
0501: NGKSGSMQSY KKIIGFVPQD DIVHGNLTVE ENLWFSGCCR LSKSMSKADK VLILERVIGS LGLQEIRNSL VGTVEKRGIS GGQRKRVNVG IEMVMEPSLL
0601: ILDEPTTGLD SASSQQLLRA LRYEASQGVN VCAVIHQPSY TLFNMFDDFV LLARGGLIAY HGPISEVENY FSGLGIKVPD RENPPDYYID ILEGIAKTKM
0701: RGHATPKHLP LLWILHNGYE VPEDMQKDLE EINMMHELYT VGSITRELSS VEQTKSKDSV HQNVSQRNDL LNRKTPGVLA QYRYYLGRVA KQRLREATQQ
0801: AVDYLILCIA GICIGTITKV NDDTLGAASY GYTIIAVSLL CQLAALRSFS PERLQYWRER ESGMSSVAYF LARDTIDHFN TVVKPIVFLS TFYFFNNPRS
0901: TLRDNYLVLL ALVYCVTGIG YTLAIWFELG LAQLCSALLP VVLVLVGTDP KFPQFIKQFC YPKWTLEAFI VAGAKNYSGV WLITRCGALL KGGYDINYFA
1001: LCIAIMMLNG VLFRFVALLS LLKLR
0001: MNFNTSLVIM LLNLKMSVDR RNWLKHGCNL RLVILVLWLV CYVSNGQTIG DTSDFNNPAV LPLVTQMVYR SLSNSTAALN RELGIRAKFC VKDPDADWNR
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK
Arabidopsis Description
ABCG24ABC transporter G family member 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAG3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.