Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 5
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G140400.1 | Wheat | plasma membrane | 94.99 | 94.34 |
| TraesCS1A01G141400.1 | Wheat | mitochondrion, plasma membrane | 86.05 | 93.89 |
| TraesCS1B01G157900.1 | Wheat | endoplasmic reticulum | 71.51 | 91.57 |
| Zm00001d032855_P002 | Maize | plasma membrane | 67.19 | 77.46 |
| OQU91719 | Sorghum | plasma membrane | 69.65 | 76.24 |
| Os10t0442900-01 | Rice | plasma membrane | 67.09 | 76.14 |
| HORVU6Hr1G091510.2 | Barley | mitochondrion | 52.85 | 51.53 |
| HORVU7Hr1G122580.37 | Barley | endoplasmic reticulum, vacuole | 41.95 | 48.69 |
| HORVU4Hr1G041540.11 | Barley | plastid | 5.89 | 26.79 |
| HORVU1Hr1G030200.1 | Barley | nucleus, peroxisome, plasma membrane | 15.13 | 22.35 |
| HORVU5Hr1G070400.3 | Barley | cytosol, peroxisome | 16.31 | 21.99 |
| HORVU6Hr1G027440.10 | Barley | plastid | 14.73 | 21.64 |
| HORVU2Hr1G018920.1 | Barley | cytosol | 10.31 | 20.55 |
| HORVU2Hr1G090960.2 | Barley | cytosol | 15.03 | 20.24 |
| HORVU2Hr1G019010.2 | Barley | plasma membrane | 7.76 | 18.85 |
| HORVU5Hr1G125010.1 | Barley | cytosol, peroxisome, plasma membrane, plastid | 12.67 | 17.84 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | UniProt:A0A287F5H3 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | EnsemblPlantsGene:HORVU1Hr1G037250 | EnsemblPlants:HORVU1Hr1G037250.2 |
| InterPro:IPR003439 | InterPro:P-loop_NTPase | PFAM:PF00005 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 |
| PANTHER:PTHR19241:SF461 | SMART:SM00382 | SUPFAM:SSF52540 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000B483E9C |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:253433232..253490291
Molecular Weight (calculated)
112610.0 Da
IEP (calculated)
8.629
GRAVY (calculated)
-0.089
Length
1018 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLPAPLAAVL LLPLVLALLP AGGRCQQGDG DRALPPSPSA AASEVLMARM HTVGQELADE VQSKYGFCMS SVNDDFNQTF SFNSDPSFIS ECNEQSQGRL
0101: VAMMCSKAEI ELYLSSLGSK RITRINRNCN PISWASGCQS GWACSTPDPN SFANNSFENP VPSRAENCRP CCPGFFCPRE LTCMMPCPLG AYCPLGTLNE
0201: TTNLCDPYSY QITPGSNQTC GSADSWADVI STNDVFCPPG HHCPTTTQKF NCSKGSYCRK GSTGETKCTW KSRCKENSIK EDITLFGGIL IVILIIVLLL
0301: VYNCSDQFIA VRAKISSKSR KKAAKIAQES ATARGRWKLA KELVLRHELE MYESSDAPEE VATSSDGILH ANKGNGKRSK NRRKLNDRTE RFRRAYSQID
0401: KERALQLDKD KLTLSGIVSR AAENRPQRPM LEVAFKGLTL SIGKKKLLQC VTGKLSPGRI TAIMGPSGAG KTTFLNAVLG KTSGYKKDGL VLVNGKSGSM
0501: QSYKKIIGFV PQDDIVHGNL TVEENLWFSG CCRLSKSMSK ADKVLILERV IGSLGLQEIR NFLVGTVEKR GISGGQRKRV NVGIEMVMEP SLLILDEPTT
0601: GLDSASSQQL LRALRHEASQ GVNVCAVIHQ PSYTLFNMFD DFVLLARGGL IAYHGPISEV ENYFSGQGIK VPDRENPPDY YIDILEGIAK TKMRGHATPK
0701: HLPLLWIIHN GYEVPEDMRK DLEEINMMHE LYTVGSITRE LSSVEQTESK DSVHQNVSQR NDLLNRKTPG VLAQYKYYLG RVAKQRLREA TQQAVDYLIL
0801: CIAGICIGTI TKVNDDTLGV ASYGYTIIAV SLLCQLAALR SFSPERLQYW RERESGMSSV AYFLARDTID HFNTVVKPIV FLSTFYFFNN PRSTLRDNYL
0901: VLLALVYCVT GIGYTLAIWF ELGLAQLCSA LLPVVLVLVG TDPKFPQFIK QFCYPKWTLE AFIIAGAKKY SGVWLITRCG ALLKGGYDIN YFALCIAIMM
1001: LNGVLFRFVA LLSLLKLR
0101: VAMMCSKAEI ELYLSSLGSK RITRINRNCN PISWASGCQS GWACSTPDPN SFANNSFENP VPSRAENCRP CCPGFFCPRE LTCMMPCPLG AYCPLGTLNE
0201: TTNLCDPYSY QITPGSNQTC GSADSWADVI STNDVFCPPG HHCPTTTQKF NCSKGSYCRK GSTGETKCTW KSRCKENSIK EDITLFGGIL IVILIIVLLL
0301: VYNCSDQFIA VRAKISSKSR KKAAKIAQES ATARGRWKLA KELVLRHELE MYESSDAPEE VATSSDGILH ANKGNGKRSK NRRKLNDRTE RFRRAYSQID
0401: KERALQLDKD KLTLSGIVSR AAENRPQRPM LEVAFKGLTL SIGKKKLLQC VTGKLSPGRI TAIMGPSGAG KTTFLNAVLG KTSGYKKDGL VLVNGKSGSM
0501: QSYKKIIGFV PQDDIVHGNL TVEENLWFSG CCRLSKSMSK ADKVLILERV IGSLGLQEIR NFLVGTVEKR GISGGQRKRV NVGIEMVMEP SLLILDEPTT
0601: GLDSASSQQL LRALRHEASQ GVNVCAVIHQ PSYTLFNMFD DFVLLARGGL IAYHGPISEV ENYFSGQGIK VPDRENPPDY YIDILEGIAK TKMRGHATPK
0701: HLPLLWIIHN GYEVPEDMRK DLEEINMMHE LYTVGSITRE LSSVEQTESK DSVHQNVSQR NDLLNRKTPG VLAQYKYYLG RVAKQRLREA TQQAVDYLIL
0801: CIAGICIGTI TKVNDDTLGV ASYGYTIIAV SLLCQLAALR SFSPERLQYW RERESGMSSV AYFLARDTID HFNTVVKPIV FLSTFYFFNN PRSTLRDNYL
0901: VLLALVYCVT GIGYTLAIWF ELGLAQLCSA LLPVVLVLVG TDPKFPQFIK QFCYPKWTLE AFIIAGAKKY SGVWLITRCG ALLKGGYDIN YFALCIAIMM
1001: LNGVLFRFVA LLSLLKLR
0001: MNFNTSLVIM LLNLKMSVDR RNWLKHGCNL RLVILVLWLV CYVSNGQTIG DTSDFNNPAV LPLVTQMVYR SLSNSTAALN RELGIRAKFC VKDPDADWNR
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK
Arabidopsis Description
ABCG24ABC transporter G family member 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAG3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.