Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 7
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G141400.1 | Wheat | mitochondrion, plasma membrane | 70.23 | 67.52 |
| HORVU1Hr1G037250.2 | Barley | plasma membrane | 76.14 | 67.09 |
| TraesCS1D01G140400.1 | Wheat | plasma membrane | 76.14 | 66.63 |
| Zm00001d032855_P002 | Maize | plasma membrane | 63.43 | 64.44 |
| OQU91719 | Sorghum | plasma membrane | 66.0 | 63.66 |
| TraesCS1B01G157900.1 | Wheat | endoplasmic reticulum | 53.73 | 60.63 |
| Os04t0194500-01 | Rice | plasma membrane | 53.96 | 45.45 |
| Os06t0731200-01 | Rice | plasma membrane | 46.04 | 41.51 |
| Os11t0416900-01 | Rice | plasma membrane | 50.28 | 40.96 |
| Os10t0163290-00 | Rice | cytosol, endoplasmic reticulum, extracellular | 7.25 | 25.59 |
| Os12t0409700-00 | Rice | cytosol, peroxisome, plasma membrane | 10.81 | 22.82 |
| Os10t0494300-01 | Rice | extracellular, plasma membrane | 18.17 | 22.55 |
| Os04t0528300-01 | Rice | plasma membrane | 17.5 | 22.08 |
| Os09t0472200-00 | Rice | plasma membrane | 16.95 | 21.23 |
| Os05t0222200-01 | Rice | nucleus, peroxisome, plasma membrane | 16.5 | 21.14 |
| Os09t0472100-01 | Rice | plasma membrane | 16.83 | 20.94 |
| Os12t0411700-01 | Rice | plastid | 16.61 | 20.9 |
| Os07t0288700-02 | Rice | plastid | 16.5 | 20.3 |
| Os09t0250800-00 | Rice | mitochondrion | 15.61 | 18.92 |
| Os03t0859500-01 | Rice | cytosol, mitochondrion, plasma membrane, plastid | 14.16 | 17.66 |
| Os09t0125900-01 | Rice | plastid | 8.81 | 15.05 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 | EnsemblPlantsGene:Os10g0442900 | EnsemblPlants:Os10t0442900-01 |
| InterPro:P-loop_NTPase | PFAM:PF00005 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF461 |
| SMART:SM00382 | SUPFAM:SSF52540 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00005E1EDC | SEG:seg |
Description
ABC TRANSPORTER G FAMILY MEMBER 25ABC transporter, White-brown complex homolog protein, Silicon-promoted formation of Casparian bands in the exodermis (Os10t0442900-01)
Coordinates
chr10:+:15928796..15936732
Molecular Weight (calculated)
98800.0 Da
IEP (calculated)
9.677
GRAVY (calculated)
0.054
Length
897 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASQLLAAA VAAAVFLAAL LVPPARCQQQ QVATPPPASA TPPVRLPPSA PPPLVGVPPG VLMARIDAVR DELAAEVQAK YGFCMANVQE DFTQAFSFSN
101: ASFVSDCMEE TQGQMTGMLC GKAEIEIYVK SLGKKPSTRG ITVQQQPKNL TVLRGTIAVK APQRNISVFG KTHVILSVVL LLVYNCSDQF IKIRAKILSK
201: SRRKAATIAQ ESATARGRWK LAKELVLSHE LEMSESDQLA ASSNEARHAT EGNGKRSKNR KKLAHARTER FRRAYSQIGR ERVLQPDNDK ITLSGVVALA
301: AENRSRRPMF EVVFKGLTLS IGKKKLLQCV TGKLSPGRVT AIMGPSGAGK TTFLNAVLGK TTGYKKDGLV LINGKSGSMQ SYKKIIGFVP QDDIVHGNLT
401: VEENLWFSAC CRSSKGMSKS DKIIVLERVI GSLGLQEIRN SLVGTVEKRG ISGGQRKRVN VGIEMVMEPS LLILDEPTTG LDSASSQLLL RALRHEALQG
501: VNVCAVIHQP SYTLFNMFDD FVLLARGGLI AYLGPISEVE TYFSSLGIKV PERENPPDYY IDILEGITKT KMRGHAAPKH LPLLWMLRNG YEVPEYMQKD
601: LEDINNVHEL YTVGSMSREE SFGDQSENAD SVHQNVREPY SLLDRKTPGV LAQYKYYLGR VTKQRLREAT LQAVDYLILC IAGICIGTIA KVKDDTFGVA
701: SYGYTIIAVS LLCQLAALRS FSPERLQYWR ERESGMSTLA YFLARDTIDH FNTLVKPVAF LSTFYFFNNP RSEFKDNYLV FLALVYCVTG IGYTFAIWFE
801: LGLAQLCSAL IPVVLVLVGT QPNIPNFIKG LCYPKWALEA LIIAGAKKYS GVWLITRCGA LLKGGYDINN FVLCIVIVML MGVLFRFIAL LSLLKLK
101: ASFVSDCMEE TQGQMTGMLC GKAEIEIYVK SLGKKPSTRG ITVQQQPKNL TVLRGTIAVK APQRNISVFG KTHVILSVVL LLVYNCSDQF IKIRAKILSK
201: SRRKAATIAQ ESATARGRWK LAKELVLSHE LEMSESDQLA ASSNEARHAT EGNGKRSKNR KKLAHARTER FRRAYSQIGR ERVLQPDNDK ITLSGVVALA
301: AENRSRRPMF EVVFKGLTLS IGKKKLLQCV TGKLSPGRVT AIMGPSGAGK TTFLNAVLGK TTGYKKDGLV LINGKSGSMQ SYKKIIGFVP QDDIVHGNLT
401: VEENLWFSAC CRSSKGMSKS DKIIVLERVI GSLGLQEIRN SLVGTVEKRG ISGGQRKRVN VGIEMVMEPS LLILDEPTTG LDSASSQLLL RALRHEALQG
501: VNVCAVIHQP SYTLFNMFDD FVLLARGGLI AYLGPISEVE TYFSSLGIKV PERENPPDYY IDILEGITKT KMRGHAAPKH LPLLWMLRNG YEVPEYMQKD
601: LEDINNVHEL YTVGSMSREE SFGDQSENAD SVHQNVREPY SLLDRKTPGV LAQYKYYLGR VTKQRLREAT LQAVDYLILC IAGICIGTIA KVKDDTFGVA
701: SYGYTIIAVS LLCQLAALRS FSPERLQYWR ERESGMSTLA YFLARDTIDH FNTLVKPVAF LSTFYFFNNP RSEFKDNYLV FLALVYCVTG IGYTFAIWFE
801: LGLAQLCSAL IPVVLVLVGT QPNIPNFIKG LCYPKWALEA LIIAGAKKYS GVWLITRCGA LLKGGYDINN FVLCIVIVML MGVLFRFIAL LSLLKLK
0001: MGRRNSYFPG NFVPLFFVFI VLILQQERVI CQEDRSLDNP AANRLYNQFV FDKISNLTEV FEDDIKRELG FCITNVKEDY NEAFNFSTKP DFLNACGKTT
0101: KGDMMQRICT AAEVRIYFNG LLGGAKRATN YLKPNKNCNL SSWMSGCEPG WACRTAKDVK VDLKDDKNVP VRTQQCAPCC AGFFCPRGIT CMIPCPLGAY
0201: CPEANLNRTT GLCDPYHYQL PSGQPNHTCG GADIWADIGS SSEVFCSAGS FCPSTIDKLP CTKGHYCRTG STAELNCFKL ATCNPRSTNQ NITAYGIMLF
0301: AGLGFLLIIL YNCSDQVLAT RERRQAKSRE KAVQSVRDSQ SREKWKSAKD IAKKHATELQ QSFSRTFSRR KSMKQPDLMR GLSQAKPGSD AALPPMLGSS
0401: SDTKKGKKKE KNKLTEMLHD IEQNPEDPEG FNLEIGDKNI KKHAPKGKAL HTQSQMFRYA YGQIEKEKAM QEQNKNLTFS GVISMANDID IRKRPMIEVA
0501: FKDLSITLKG KNKHLMRCVT GKLSPGRVSA VMGPSGAGKT TFLTALTGKA PGCIMTGMIL VNGKVESIQS YKKIIGFVPQ DDIVHGNLTV EENLWFSARC
0601: RLPADLPKPE KVLVVERVIE SLGLQHVRDS LVGTVEKRGI SGGQRKRVNV GLEMVMEPSL LILDEPTSGL DSSSSQLLLR ALRREALEGV NICMVVHQPS
0701: YTLFRMFDDL ILLAKGGLIC YQGPVKKVEE YFSSLGIVVP ERVNPPDYYI DILEGILKPS TSSGVTYKQL PVRWMLHNGY PVPMDMLKSI EGMASSASGE
0801: NSAHGGSAHG SVVGDDGTSF AGEFWQDVKA NVEIKKDNLQ NNFSSSGDLS EREVPGVYQQ YRYFLGRLGK QRLREARTLA VDYLILLLAG ICLGTLAKVS
0901: DETFGAMGYT YTVIAVSLLC KITALRSFSL DKLHYWRESR AGMSSLAYFL AKDTVDHFNT IVKPLVYLSM FYFFNNPRST VTDNYVVLIC LVYCVTGIAY
1001: TLAILFEPGP AQLWSVLLPV VLTLIATSTN DNKIVDSISE LCYTRWALEA FVVSNAQRYK GVWLITRCGS LMENGYNIKH FPRCLVFLTL TGILSRCAAF
1101: FCMVTFQKK
0101: KGDMMQRICT AAEVRIYFNG LLGGAKRATN YLKPNKNCNL SSWMSGCEPG WACRTAKDVK VDLKDDKNVP VRTQQCAPCC AGFFCPRGIT CMIPCPLGAY
0201: CPEANLNRTT GLCDPYHYQL PSGQPNHTCG GADIWADIGS SSEVFCSAGS FCPSTIDKLP CTKGHYCRTG STAELNCFKL ATCNPRSTNQ NITAYGIMLF
0301: AGLGFLLIIL YNCSDQVLAT RERRQAKSRE KAVQSVRDSQ SREKWKSAKD IAKKHATELQ QSFSRTFSRR KSMKQPDLMR GLSQAKPGSD AALPPMLGSS
0401: SDTKKGKKKE KNKLTEMLHD IEQNPEDPEG FNLEIGDKNI KKHAPKGKAL HTQSQMFRYA YGQIEKEKAM QEQNKNLTFS GVISMANDID IRKRPMIEVA
0501: FKDLSITLKG KNKHLMRCVT GKLSPGRVSA VMGPSGAGKT TFLTALTGKA PGCIMTGMIL VNGKVESIQS YKKIIGFVPQ DDIVHGNLTV EENLWFSARC
0601: RLPADLPKPE KVLVVERVIE SLGLQHVRDS LVGTVEKRGI SGGQRKRVNV GLEMVMEPSL LILDEPTSGL DSSSSQLLLR ALRREALEGV NICMVVHQPS
0701: YTLFRMFDDL ILLAKGGLIC YQGPVKKVEE YFSSLGIVVP ERVNPPDYYI DILEGILKPS TSSGVTYKQL PVRWMLHNGY PVPMDMLKSI EGMASSASGE
0801: NSAHGGSAHG SVVGDDGTSF AGEFWQDVKA NVEIKKDNLQ NNFSSSGDLS EREVPGVYQQ YRYFLGRLGK QRLREARTLA VDYLILLLAG ICLGTLAKVS
0901: DETFGAMGYT YTVIAVSLLC KITALRSFSL DKLHYWRESR AGMSSLAYFL AKDTVDHFNT IVKPLVYLSM FYFFNNPRST VTDNYVVLIC LVYCVTGIAY
1001: TLAILFEPGP AQLWSVLLPV VLTLIATSTN DNKIVDSISE LCYTRWALEA FVVSNAQRYK GVWLITRCGS LMENGYNIKH FPRCLVFLTL TGILSRCAAF
1101: FCMVTFQKK
Arabidopsis Description
ABCG28ABC transporter G family member 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF46]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.