CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26211	Canola	cytosol, peroxisome, plasma membrane	99.41	99.41
Bra025944.1-P	Field mustard	cytosol, peroxisome, plasma membrane	99.11	99.11
CDX96749	Canola	cytosol, peroxisome, plasma membrane	96.3	96.16
CDX83888	Canola	cytosol, peroxisome, plasma membrane	95.71	95.29
AT1G17840.1	Thale cress	cytosol, peroxisome, plasma membrane	97.19	93.46
VIT_16s0039g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	84.02	80.57
KRH09311	Soybean	cytosol, peroxisome, plasma membrane	82.4	78.9
KRH38814	Soybean	cytosol, peroxisome, plasma membrane	82.4	78.78
GSMUA_Achr5P19820_001	Banana	cytosol, peroxisome, plasma membrane	75.59	76.61
PGSC0003DMT400039496	Potato	cytosol, peroxisome, plasma membrane	79.88	76.38
GSMUA_Achr5P10800_001	Banana	cytosol, peroxisome, plasma membrane	77.96	76.05
Solyc03g019760.2.1	Tomato	nucleus	79.73	75.92
TraesCS1B01G181300.2	Wheat	cytosol, peroxisome, plasma membrane	75.89	71.65
Os10t0494300-01	Rice	extracellular, plasma membrane	76.48	71.51
KXG38261	Sorghum	cytosol, peroxisome, plasma membrane	75.44	71.43
TraesCS1D01G161500.2	Wheat	cytosol, peroxisome, plasma membrane	75.59	71.37
Os04t0528300-01	Rice	plasma membrane	74.41	70.75
Zm00001d013960_P001	Maize	cytosol, peroxisome, plasma membrane	74.26	70.7
Zm00001d002871_P001	Maize	cytosol, peroxisome, plasma membrane	75.3	70.6
TraesCSU01G020100.1	Wheat	plasma membrane	74.26	70.11
TraesCS2A01G374100.1	Wheat	plasma membrane	74.11	69.78
Zm00001d032601_P002	Maize	cytosol, peroxisome, plasma membrane	73.22	67.26
HORVU2Hr1G090960.2	Barley	cytosol	73.82	66.01
TraesCS1A01G164500.1	Wheat	cytosol	66.57	65.6
OQU82009	Sorghum	mitochondrion	74.85	64.87
TraesCS2D01G370400.2	Wheat	plastid	74.11	64.56
TraesCS1D01G150800.1	Wheat	cytosol, peroxisome, plasma membrane	64.79	60.83
CDY43913	Canola	nucleus, peroxisome, plasma membrane	51.63	50.43
CDX87823	Canola	nucleus, peroxisome, plasma membrane	50.15	50.07
CDY61513	Canola	golgi, mitochondrion, peroxisome, plasma membrane	46.15	49.52
CDY06406	Canola	peroxisome	49.7	49.48
CDY22844	Canola	plastid	43.79	46.98
CDY49810	Canola	plasma membrane	43.64	46.83
CDY18337	Canola	plasma membrane	14.35	39.27
CDX77150	Canola	plastid	32.69	30.27
CDY30512	Canola	cytosol	17.75	29.06
CDX71393	Canola	plastid	33.28	28.2
CDY04533	Canola	mitochondrion	33.73	27.94
CDX71030	Canola	plasma membrane	22.63	16.02
CDY24098	Canola	plasma membrane	24.26	15.4
CDY62072	Canola	endoplasmic reticulum, golgi, plasma membrane	24.26	15.4
CDY25855	Canola	plasma membrane	23.52	15.33
CDY51880	Canola	plasma membrane	23.37	14.99
CDY62076	Canola	plasma membrane	23.67	14.73
CDX91328	Canola	plasma membrane	23.52	14.71
CDX74994	Canola	plasma membrane	23.52	14.71
CDY24100	Canola	plasma membrane	23.37	14.55
CDY11955	Canola	plasma membrane	23.22	14.43
CDY36779	Canola	plasma membrane	22.78	14.41
CDY70653	Canola	extracellular, golgi, vacuole	1.04	1.98

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078G140	UniProt:A0A078G140	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlants:CDY19179	ProteinID:CDY19179	ProteinID:CDY19179.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00006472001	InterPro:IPR003439	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF271
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0004EDB1E2	SEG:seg	:

Description

BnaC05g13800DBnaC05g13800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G140]

Coordinates

chrLK032093:+:33014..36700

Molecular Weight (calculated)

75385.5 Da

IEP (calculated)

9.084

GRAVY (calculated)

0.138

Length

676 amino acids

Sequence
(BLAST)

001: MEIEPSRQQT TVPASVGGGN FPVGGLSPLS EAIWRDKTPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG TLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKLALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEFFAQA GFPCPALRNP SDHFLRCVNS DFDKVRATLK GSMKLRFEAS
301: DDPLEKITTT EAIRLLVDYY HTSDYYYNAK AKVEEISQYK GTILDSGGSQ ASFLLQTYTL TKRSFINMSR DFGYYWLRLL IYILVTVCIG TIYWNVGTSY
401: SAILARGSCA SFVFGFVTFM SIGGFPSFVE DMKVFQRERL NGHYGVAAFV IANTLAATPF LIIITFISGT ICYFMVGLHP GFTHYLFFVL CLYASVTVVE
501: SLMMAIASIV PNFLMGIIIG AGIQGIFMLV SGFFRLPNDI PKLFWRYPMS YISFHFWALQ GQYQNDLRGL MFDSQGSAFK IPGEYVLENV FQINVHRSKW
601: INLSVILSMI IIYRIIFFIM IKTNEDVTPW VRGYIARRRM KQKNGTQNTT VAPDGLTQSP SLRNYIATRT NGAPRW

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.