CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22844	Canola	plastid	97.3	97.3
AT1G51460.1	Thale cress	plasma membrane	88.41	82.15
VIT_06s0061g00260.t01	Wine grape	cytosol	65.24	60.26
KRH24072	Soybean	cytosol, peroxisome, plasma membrane	63.49	58.14
KRH29043	Soybean	cytosol, peroxisome, plasma membrane	63.33	57.66
GSMUA_Achr4P00390_001	Banana	plasma membrane	56.51	57.51
CDY61513	Canola	golgi, mitochondrion, peroxisome, plasma membrane	57.46	57.46
Solyc11g065360.1.1	Tomato	cytosol, peroxisome, plasma membrane	60.0	54.94
CDX87823	Canola	nucleus, peroxisome, plasma membrane	57.78	53.77
CDY06406	Canola	peroxisome	57.94	53.76
EES19248	Sorghum	cytosol, peroxisome, plasma membrane	58.57	53.63
Zm00001d010426_P001	Maize	plastid	58.73	53.62
CDY43913	Canola	nucleus, peroxisome, plasma membrane	58.89	53.61
HORVU1Hr1G030200.1	Barley	nucleus, peroxisome, plasma membrane	57.3	52.39
TraesCS1B01G147700.1	Wheat	nucleus, peroxisome, plasma membrane	57.14	52.25
TraesCS1A01G126900.1	Wheat	nucleus, peroxisome, plasma membrane	57.14	52.25
TraesCS1D01G126600.1	Wheat	nucleus, peroxisome, plasma membrane	57.14	52.25
Os05t0222200-01	Rice	nucleus, peroxisome, plasma membrane	57.78	52.0
CDY18337	Canola	plasma membrane	18.41	46.96
CDY26211	Canola	cytosol, peroxisome, plasma membrane	46.83	43.64
CDY19179	Canola	cytosol, peroxisome, plasma membrane	46.83	43.64
CDX96749	Canola	cytosol, peroxisome, plasma membrane	46.67	43.43
CDX83888	Canola	cytosol, peroxisome, plasma membrane	46.67	43.3
GSMUA_Achr4P00380_001	Banana	plastid	55.71	42.34
CDY30512	Canola	cytosol	17.94	27.36
CDX77150	Canola	plastid	30.48	26.3
CDX71393	Canola	plastid	31.59	24.94
CDY04533	Canola	mitochondrion	31.43	24.26
CDX71030	Canola	plasma membrane	22.7	14.97
CDY25855	Canola	plasma membrane	23.33	14.18
CDY24098	Canola	plasma membrane	23.33	13.8
CDY51880	Canola	plasma membrane	22.86	13.66
CDY62072	Canola	endoplasmic reticulum, golgi, plasma membrane	23.02	13.62
CDY11955	Canola	plasma membrane	23.33	13.51
CDY36779	Canola	plasma membrane	22.38	13.19
CDY62076	Canola	plasma membrane	22.7	13.17
CDY24100	Canola	plasma membrane	22.7	13.17
CDX91328	Canola	plasma membrane	21.27	12.4
CDX74994	Canola	plasma membrane	21.27	12.4
CDY70653	Canola	extracellular, golgi, vacuole	0.0	0.0

Protein Annotations

MapMan:21.9.4.2	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	GO:A0A078IFY0	UniProt:A0A078IFY0	InterPro:AAA+_ATPase
InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlants:CDY49810	ProteinID:CDY49810	ProteinID:CDY49810.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00093844001	InterPro:IPR003439
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF186	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0004EF3DE2	:

Description

BnaC06g04590DBnaC06g04590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFY0]

Coordinates

chrLK032860:+:57259..62965

Molecular Weight (calculated)

70195.8 Da

IEP (calculated)

9.548

GRAVY (calculated)

0.137

Length

630 amino acids

Sequence
(BLAST)

001: MGPSGSGKST LLDALAGRLA GNVVMSGKVL VNGKKRRLDF GTSAYVTQED VLLGTLTVRE SIAYSAHLRL PSKLSRKEIS DIVEATITDM GLQECSDRSI
101: GNWHMRGISG GEKKRLSIAL EVLTKPSLLF LDEPTSGLDS ASAFYVVQIL RNIASNGKTV ISSIHQPSGE VFALFDDLLL LSGGETVYFG EAKFATKFFG
201: ETGFPCPSRR NPSDHFLRCV NSDFDGITAT VVESRRIHDS SFSLYQETSN TLDPLDNMPT AEIRTTLVRK FKCSEYAVAS RARIQEITSI KGLVTERNNA
301: SQTSWWKQLR VLTQRSFINM SRDLGYYWIR IGVYILLSIC VGSVFFNVGR NHTNVMNTAA CGGFMAGFMT IMSIGGFQSF IEEMKVFSRE RLNGHYGVAV
401: YTVSNFLSSL PFIILMCLGT TSITNYMVKF QPSASHFFYS CLDLISAIAT VESCMMMIAS MVPNFLMGVI IGAGYIGVMI LSAGFFRLFP DLPMVFWRYP
501: VSYLNYGAWA LQGAFKNEMI GVEYDSPLPL VQKMKGELIL QTVLGINPAQ SKWLDLGVVM MILVAYRLLF FAMLKFREKV FPLIHMLYTK RTLSHIQKRP
601: SFRRMSPLPS KRHNVHHALS SQEGLNSPLH

Best Arabidopsis Sequence Match ( AT1G51460.1 )
(BLAST)

001: MTTPEGAMYV AWEDLTVVIP NFGEGATKRL LNGVNGCGEP NRILAIMGPS GSGKSTLLDA LAGRLAGNVV MSGKVLVNGK KRRLDFGAAA YVTQEDVLLG
101: TLTVRESISY SAHLRLPSKL TREEISDIVE ATITDMGLEE CSDRTIGNWH LRGISGGEKK RLSIALEVLT KPSLLFLDEP TSGLDSASAF FVVQILRNIA
201: SSGKTVVSSI HQPSGEVFAL FDDLLLLSGG ETVYFGEAES ATKFFGEAGF PCPSRRNPSD HFLRCVNSDF DNVTAALVES RRINDSSFSL HQLHETTNTL
301: DPLDDIPTAE IRTTLVRKFK CSLYAAASRA RIQEIASIVG IVTERKKGSQ TNWWKQLRIL TQRSFINMSR DLGYYWMRIA VYIVLSICVG SIFFNVGRNH
401: TNVMSTAACG GFMAGFMTFM SIGGFQSFIE EMKVFSRERL NGHYGVAVYT VSNLLSSLPF IILMCLSTSS ITIYMVRFQS GGSHFFYNCL DLICAITTVE
501: SCMMMIASVV PNFLMGVMLG AGYIGIMVLS AGFFRFFPDL PMVFWRYPVS YINYGAWALQ GAYKNEMIGV EYDSPLPLVP KMKGELILQT VLGINPESSK
601: WLDLAVVMMI LIGYRIAFFA ILKFREKVFP VIHMLYTKRT LSHIQKRPSF RRMTPFPSRR YPVHHALSSQ EGLNSPLH

Arabidopsis Description

ABCG13ABC transporter G family member 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8J8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.