Factsheet for VIT_06s0061g00260.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0061g00230.t01	Wine grape	plasma membrane	70.09	76.85
KRH24072	Soybean	cytosol, peroxisome, plasma membrane	70.67	70.06
KRH29043	Soybean	cytosol, peroxisome, plasma membrane	70.82	69.8
VIT_06s0061g00250.t01	Wine grape	cytosol	35.48	68.36
Bra018911.1-P	Field mustard	plastid	60.56	65.56
CDY22844	Canola	plastid	60.56	65.56
CDY49810	Canola	plasma membrane	60.26	65.24
AT1G51460.1	Thale cress	plasma membrane	64.81	65.19
GSMUA_Achr4P00390_001	Banana	plasma membrane	58.94	64.94
Solyc11g065360.1.1	Tomato	cytosol, peroxisome, plasma membrane	64.81	64.24
VIT_06s0061g00240.t01	Wine grape	cytosol, peroxisome, plasma membrane	66.86	62.72
Zm00001d010426_P001	Maize	plastid	61.73	61.01
EES19248	Sorghum	cytosol, peroxisome, plasma membrane	61.44	60.9
HORVU1Hr1G030200.1	Barley	nucleus, peroxisome, plasma membrane	61.44	60.81
Os05t0222200-01	Rice	nucleus, peroxisome, plasma membrane	62.17	60.57
TraesCS1B01G147700.1	Wheat	nucleus, peroxisome, plasma membrane	61.14	60.52
TraesCS1A01G126900.1	Wheat	nucleus, peroxisome, plasma membrane	61.14	60.52
TraesCS1D01G126600.1	Wheat	nucleus, peroxisome, plasma membrane	61.14	60.52
VIT_16s0039g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	55.43	53.62
VIT_07s0191g00010.t01	Wine grape	peroxisome, plasma membrane, vacuole	45.16	48.97
GSMUA_Achr4P00380_001	Banana	plastid	57.62	47.41
VIT_03s0017g01290.t01	Wine grape	cytosol	44.57	47.2
VIT_03s0017g01320.t01	Wine grape	plasma membrane	44.28	46.82
VIT_03s0017g01300.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	45.16	45.7
VIT_03s0017g01280.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	44.43	44.82
VIT_00s0822g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	15.84	44.44
VIT_00s0625g00020.t01	Wine grape	plastid	46.04	42.38
VIT_00s0625g00050.t01	Wine grape	cytosol	38.12	40.44
VIT_06s0009g00530.t01	Wine grape	mitochondrion	10.7	39.25
VIT_00s0989g00010.t01	Wine grape	plastid	45.45	34.79
VIT_06s0061g00350.t01	Wine grape	plastid	33.43	31.58
VIT_06s0004g02490.t01	Wine grape	plasma membrane	25.22	15.65
VIT_13s0019g04600.t01	Wine grape	plasma membrane	24.05	14.64
VIT_08s0040g01620.t01	Wine grape	cytosol	23.61	14.47

Protein Annotations

EntrezGene:100255043	wikigene:100255043	MapMan:21.9.4.2	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EMBL:AM468981	ProteinID:CAN77224	ProteinID:CAN77224.1
ProteinID:CCB44244	ProteinID:CCB44244.1	UniProt:F6GWA9	EMBL:FN594957	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	EntrezGene:LOC100255043	wikigene:LOC100255043
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF338	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00015C9EDF	ArrayExpress:VIT_06s0061g00260
EnsemblPlantsGene:VIT_06s0061g00260	EnsemblPlants:VIT_06s0061g00260.t01	unigene:Vvi.20310	RefSeq:XP_002274038	RefSeq:XP_002274038.1	SEG:seg

Description

No Description!

Coordinates

chr6:+:17559370..17564204

Molecular Weight (calculated)

75871.5 Da

IEP (calculated)

9.531

GRAVY (calculated)

0.043

Length

682 amino acids

Sequence
(BLAST)

001: MEIEVANGGG GGRGGDGHDG RAKYLVWEDL TVVLPNFGNG PTKRLLHGLS GCAEAGRIMA IMGPSGSGKS TLLDSLAGRL AGNVIMTGNV LLNGKKRRLD
101: YGGVAYVTQE DVLLGTLTVK ETLSYSAHLR LPSSMTREEV DEIVEGTIME MGLQDCSDRL VGNWHLRGIS GGEKKRVSIA LEILSRPRLL FLDEPTSGLD
201: SASAFFVTHT LRNIARDGRI VISSIHQPSS EVFALFDDLF MLSGGETIYS GEAKKAVEFF DEAGFPCPSR RNPSDHFLRC INSDFDVVTA TLKGSQRKYE
301: IQSTDPLMNL ATAEIKAMLV RKYKLSEYAN RARARIQEIS TIEGLVSESE RGSQARWWKQ LSTLTRRSSV NMSRDIGYYW LRVIIYTVVS VCVGTIYFDV
401: GTGYTSILAR GACGGFVSGF MTFMSIGGFP SFIEEMKVFY RERLNGHYGI LVFILSNFLS SLPFLIGMSL TTTTIIYYTV KLQPGFLHYT FGFLTLLSSI
501: AVVESIMMIV ASLVPNFLLG MVTGAGIIGI MMMTSGFFRL LPDIPKPVWR YPISYINYGA WALQGAYKNE LIGLEFDPPF PGEPKLKGEH ILTTILGVRM
601: DHSKWWDLTA VVIILISYRV LFFTILKLRE RTSPLFRRLY TKRTLHHLEK RPSFRKKPSF PSKRHQTLSS LSSQEGLNSP LH

Best Arabidopsis Sequence Match ( AT3G21090.1 )
(BLAST)

001: MELEGSSSGR RQLPSKLEMS RGAYLAWEDL TVVIPNFSDG PTRRLLQRLN GYAEPGRIMA IMGPSGSGKS TLLDSLAGRL ARNVVMTGNL LLNGKKARLD
101: YGLVAYVTQE DVLLGTLTVR ETITYSAHLR LPSDMSKEEV SDIVEGTIME LGLQDCSDRV IGNWHARGVS GGERKRVSIA LEILTRPQIL FLDEPTSGLD
201: SASAFFVIQA LRNIARDGRT VISSVHQPSS EVFALFDDLF LLSSGESVYF GEAKSAVEFF AESGFPCPKK RNPSDHFLRC INSDFDTVTA TLKGSQRIQE
301: TPATSDPLMN LATSVIKARL VENYKRSKYA KSAKSRIREL SNIEGLEMEI RKGSEATWWK QLRTLTARSF INMCRDVGYY WTRIISYIVV SISVGTIFYD
401: VGYSYTSILA RVSCGGFITG FMTFMSIGGF PSFLEEMKVF YKERLSGYYG VSVYILSNYI SSFPFLVAIS VITGTITYNL VKFRPGFSHY AFFCLNIFFS
501: VSVIESLMMV VASVVPNFLM GLITGAGLIG IIMMTSGFFR LLPDLPKIFW RYPVSYISYG SWAIQGGYKN DFLGLEFEPL FPGEPKMTGE EVIEKVFGVK
601: VTYSKWWDLA AVVAILVCYR LLFFVVLKLR ERAGPALKAI QAKRTMRNLD RRPSFKRMPS LSLSLSSMSS RRHQPLRSLS SQEGLNSPIH Y

Arabidopsis Description

ABCG15ABC transporter G family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWI9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.