Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plasma membrane 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0004g02490.t01 | Wine grape | plasma membrane | 72.69 | 73.61 |
| VIT_13s0019g04600.t01 | Wine grape | plasma membrane | 72.06 | 71.61 |
| AT2G37010.1 | Thale cress | plasma membrane | 67.74 | 69.69 |
| CDX74994 | Canola | plasma membrane | 67.66 | 69.66 |
| CDX91328 | Canola | plasma membrane | 67.66 | 69.66 |
| Bra005224.1-P | Field mustard | plasma membrane | 64.42 | 69.48 |
| KRH32536 | Soybean | plasma membrane | 67.74 | 68.61 |
| KRH19928 | Soybean | plasma membrane | 67.57 | 68.43 |
| Solyc09g008000.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 64.51 | 65.81 |
| VIT_06s0061g00250.t01 | Wine grape | cytosol | 9.79 | 30.79 |
| VIT_06s0009g00530.t01 | Wine grape | mitochondrion | 4.58 | 27.42 |
| VIT_03s0017g01320.t01 | Wine grape | plasma membrane | 14.2 | 24.5 |
| VIT_16s0039g00010.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 15.18 | 23.97 |
| VIT_03s0017g01290.t01 | Wine grape | cytosol | 13.75 | 23.76 |
| VIT_07s0191g00010.t01 | Wine grape | peroxisome, plasma membrane, vacuole | 13.39 | 23.69 |
| VIT_06s0061g00260.t01 | Wine grape | cytosol | 14.47 | 23.61 |
| VIT_06s0061g00230.t01 | Wine grape | plasma membrane | 13.03 | 23.31 |
| VIT_03s0017g01300.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 14.11 | 23.29 |
| VIT_03s0017g01280.t01 | Wine grape | cytosol, nucleus, peroxisome, plastid | 13.75 | 22.63 |
| VIT_06s0061g00240.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 14.65 | 22.42 |
| VIT_06s0061g00350.t01 | Wine grape | plastid | 14.47 | 22.3 |
| VIT_00s0625g00020.t01 | Wine grape | plastid | 14.29 | 21.46 |
| VIT_00s0989g00010.t01 | Wine grape | plastid | 14.82 | 18.52 |
| VIT_00s0625g00050.t01 | Wine grape | cytosol | 10.69 | 18.51 |
| VIT_00s0822g00010.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 3.05 | 13.99 |
Protein Annotations
| EntrezGene:100265375 | wikigene:100265375 | MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like |
| InterPro:ABC_transporter_CS | ProteinID:CCB57088 | ProteinID:CCB57088.1 | UniProt:F6HR39 | EMBL:FN596008 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | EntrezGene:LOC100265375 |
| wikigene:LOC100265375 | InterPro:P-loop_NTPase | PFAM:PF00005 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 |
| PANTHER:PTHR19241:SF445 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI000210912D | ArrayExpress:VIT_08s0040g01620 |
| EnsemblPlantsGene:VIT_08s0040g01620 | EnsemblPlants:VIT_08s0040g01620.t01 | RefSeq:XP_002276609 | RefSeq:XP_002276609.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr8:+:12741119..12757981
Molecular Weight (calculated)
122949.0 Da
IEP (calculated)
8.849
GRAVY (calculated)
-0.167
Length
1113 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKKGLKEFSL KSENLLENET KNFNNSSDIS NVDDVDTDSY SQTGNPAVLP LITQVIYSRL SNLTTIFNGD ITNSLGFCIK NVDADWNGAF NFSGNLNFLT
0101: DCIRQTKGDI TQRLCTAAEM KFYFSSFFDS APTKTNYLRP NKNCNLTSWV SGCEPGWTCS VGMDQKVELK NSKDMPSRTR DCQPCCAGFF CPQGLTCMIP
0201: CPLGSYCPLG KLNKTTGRCE PYGYQIPPGK PNHTCGGADI WADVESSRDV FCSAGSYCPT TTEKVPCSEG HYCRTGSTSE KRCFKLTTCN PSTANQNIHA
0301: YGIMLIVALS TLLLIIYNCS DQVLTTREKR QAKSREAAIR SARETAQARE RWKSAKDVAK KRTLGLQAQL SRTFSRAKSV KQPEQKVLGQ AKPGTDDALL
0401: PPLAPVTATN GSKAKKKEQS NLTKMLHALE DDPENPEGFN LDIGDKHIKK NMPKGKQMHT RSQIFKYAYG QLEKEKAMQQ QDKNLTFSGV ISMATDGEIR
0501: TRPVIEVAFK DLTLTLKGKN KHLLRCVTGK IMPGRVSAVM GPSGAGKTTF LSALVGKTTG CTRTGSILIN GKDESIHSYK KIIGFVPQDD IVHGNLTVEE
0601: NLRFSARCRL SANMPKPDKV LVVERVIESL GLQAVRDSLV GTVEKRGISG GQRKRVNVGL EMVMEPSLLI LDEPTSGLDS SSSNLLLRAL RREALEGVNI
0701: SMVVHQPSYT LFRMFDDLIL LAKGGLTVYH GSVKKVEEYF AGIGITVPER VNPPDHFIDI LEGIVKPSSG VTHQQLPIRW MLHNGYAVPP DMLQLADGIA
0801: SPAVGSNPSD ATDSSAHGGS EQSFAGDLWQ DVKFNVRLKH DNIQHNFLRS KDLSNRVTAG VLRQYRYFLG RVGKQRLREA KIQAVDYLIL LLAGACLGTL
0901: AKVSDETFGA LGYTYTVIAV SLLCKIAALR SFSLDKLHYW RESASGMSSL AYFLSKDTID HFNTVVKPLV YLSMFYFFNN PRSSFTDNYI VLLCLVYCVT
1001: GIAYVFAIFL EPSPAQLWSV LLPVVLTLIA TQENQTGIVK QIGKLCYTKY ALEAFVIANA QRYSGVWLIT RCGSLMGSGY DLDDWDLCLV FLIVNGVVCR
1101: ILAFFVMVTF QKK
0101: DCIRQTKGDI TQRLCTAAEM KFYFSSFFDS APTKTNYLRP NKNCNLTSWV SGCEPGWTCS VGMDQKVELK NSKDMPSRTR DCQPCCAGFF CPQGLTCMIP
0201: CPLGSYCPLG KLNKTTGRCE PYGYQIPPGK PNHTCGGADI WADVESSRDV FCSAGSYCPT TTEKVPCSEG HYCRTGSTSE KRCFKLTTCN PSTANQNIHA
0301: YGIMLIVALS TLLLIIYNCS DQVLTTREKR QAKSREAAIR SARETAQARE RWKSAKDVAK KRTLGLQAQL SRTFSRAKSV KQPEQKVLGQ AKPGTDDALL
0401: PPLAPVTATN GSKAKKKEQS NLTKMLHALE DDPENPEGFN LDIGDKHIKK NMPKGKQMHT RSQIFKYAYG QLEKEKAMQQ QDKNLTFSGV ISMATDGEIR
0501: TRPVIEVAFK DLTLTLKGKN KHLLRCVTGK IMPGRVSAVM GPSGAGKTTF LSALVGKTTG CTRTGSILIN GKDESIHSYK KIIGFVPQDD IVHGNLTVEE
0601: NLRFSARCRL SANMPKPDKV LVVERVIESL GLQAVRDSLV GTVEKRGISG GQRKRVNVGL EMVMEPSLLI LDEPTSGLDS SSSNLLLRAL RREALEGVNI
0701: SMVVHQPSYT LFRMFDDLIL LAKGGLTVYH GSVKKVEEYF AGIGITVPER VNPPDHFIDI LEGIVKPSSG VTHQQLPIRW MLHNGYAVPP DMLQLADGIA
0801: SPAVGSNPSD ATDSSAHGGS EQSFAGDLWQ DVKFNVRLKH DNIQHNFLRS KDLSNRVTAG VLRQYRYFLG RVGKQRLREA KIQAVDYLIL LLAGACLGTL
0901: AKVSDETFGA LGYTYTVIAV SLLCKIAALR SFSLDKLHYW RESASGMSSL AYFLSKDTID HFNTVVKPLV YLSMFYFFNN PRSSFTDNYI VLLCLVYCVT
1001: GIAYVFAIFL EPSPAQLWSV LLPVVLTLIA TQENQTGIVK QIGKLCYTKY ALEAFVIANA QRYSGVWLIT RCGSLMGSGY DLDDWDLCLV FLIVNGVVCR
1101: ILAFFVMVTF QKK
0001: MRVRVDVCWT QHIFLFFVFG LSFMSFALSL DGDDYSKTGN PKALVSVTNL IYTRLQNLKT VLKADVDRDL GYCIKNLKGD WNEAFNFDKN LDFLSNCVKK
0101: NDGDLTLRLC SAAEIKFYFS SFVRRDEATT VHVKPNINCN LAKWVSGCEP GWSCNADDEK RFDLNNGKIL PSRTRKCQPC CEGFFCPQGL ACMIPCPLGA
0201: YCPLAKLNKT TGFCEPYNYQ IPPGKLNHTC GSADSWVDAE SSGDMFCSPG SYCPTTIRKV TCSSGHYCRQ GSTSQKPCFK LATCNPNTAN QNIHAYGAIL
0301: IASLSLLMIM VYNCSDQVLA TREKRQAKSR EAAARHAKET TQARERWKTA KGVAKNQKMG LSAQLSQTFS RMKSARKDAT PVKASGKSKD KKKEPSNLTK
0401: MMKSMEENPS NNEGFNVGTG SKPGKKPQAP KGKQLHTQSQ IFKYAYGQIE KEKAMEQNNK NLTFSGVISM ATDTEMRTRP VIEVAFKDLT LTLKGKHKHI
0501: LRSVTGKIMP GRVSAVMGPS GAGKTTFLSA LAGKATGCTR TGLILINGRN DSINSYKKIT GFVPQDDVVH GNLTVEENLR FSARCRLSAY MSKADKVLII
0601: ERVIESLGLQ HVRDSLVGTI EKRGISGGQR KRVNVGVEMV MEPSLLILDE PTTGLDSASS QLLLRALRRE ALEGVNICMV VHQPSYTMYK MFDDMIILAK
0701: GGLTVYHGSV KKIEEYFADI GITVPDRVNP PDHYIDILEG IVKPDGDITI EQLPVRWMLH NGYPVPHDML KFCDGLPSSS TGSAQEDSTH NSFSNDLWQD
0801: VKTNVEITKD QLQHNYSNSH DNSNRVTPTV GRQYRYFVGR VGKQRLREAR LQALDFLILL VAGACLGTLA KVNDETIDTL GYTYTIIAVS LLCKISALRS
0901: FSVDKLQYWR ESAAGISSLA HFMAKDTMDH LNTIMKPLVY LSMFYFFNNP RSSFEDNYIV LVCLVYCVTG MAYIFAILYS PSAAQLLSVL VPVVMTLIAN
1001: QDKESMVLKY LGSFCYPKWT LEAFVLSNAQ RYSGVWVVTR CSSLSQNGYD LSDWILCLIV LVLMGLICRF IAYFCMVTFQ KK
0101: NDGDLTLRLC SAAEIKFYFS SFVRRDEATT VHVKPNINCN LAKWVSGCEP GWSCNADDEK RFDLNNGKIL PSRTRKCQPC CEGFFCPQGL ACMIPCPLGA
0201: YCPLAKLNKT TGFCEPYNYQ IPPGKLNHTC GSADSWVDAE SSGDMFCSPG SYCPTTIRKV TCSSGHYCRQ GSTSQKPCFK LATCNPNTAN QNIHAYGAIL
0301: IASLSLLMIM VYNCSDQVLA TREKRQAKSR EAAARHAKET TQARERWKTA KGVAKNQKMG LSAQLSQTFS RMKSARKDAT PVKASGKSKD KKKEPSNLTK
0401: MMKSMEENPS NNEGFNVGTG SKPGKKPQAP KGKQLHTQSQ IFKYAYGQIE KEKAMEQNNK NLTFSGVISM ATDTEMRTRP VIEVAFKDLT LTLKGKHKHI
0501: LRSVTGKIMP GRVSAVMGPS GAGKTTFLSA LAGKATGCTR TGLILINGRN DSINSYKKIT GFVPQDDVVH GNLTVEENLR FSARCRLSAY MSKADKVLII
0601: ERVIESLGLQ HVRDSLVGTI EKRGISGGQR KRVNVGVEMV MEPSLLILDE PTTGLDSASS QLLLRALRRE ALEGVNICMV VHQPSYTMYK MFDDMIILAK
0701: GGLTVYHGSV KKIEEYFADI GITVPDRVNP PDHYIDILEG IVKPDGDITI EQLPVRWMLH NGYPVPHDML KFCDGLPSSS TGSAQEDSTH NSFSNDLWQD
0801: VKTNVEITKD QLQHNYSNSH DNSNRVTPTV GRQYRYFVGR VGKQRLREAR LQALDFLILL VAGACLGTLA KVNDETIDTL GYTYTIIAVS LLCKISALRS
0901: FSVDKLQYWR ESAAGISSLA HFMAKDTMDH LNTIMKPLVY LSMFYFFNNP RSSFEDNYIV LVCLVYCVTG MAYIFAILYS PSAAQLLSVL VPVVMTLIAN
1001: QDKESMVLKY LGSFCYPKWT LEAFVLSNAQ RYSGVWVVTR CSSLSQNGYD LSDWILCLIV LVLMGLICRF IAYFCMVTFQ KK
Arabidopsis Description
WBC30Putative white-brown complex homolog protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJK6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.