Subcellular Localization
min:
: max
Winner_takes_all: golgi, plasma membrane, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 6
- plasma membrane 7
- endoplasmic reticulum 6
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0040g01620.t01 | Wine grape | cytosol | 65.81 | 64.51 |
| AT2G37010.1 | Thale cress | plasma membrane | 61.5 | 62.01 |
| CDX74994 | Canola | plasma membrane | 61.32 | 61.89 |
| CDX91328 | Canola | plasma membrane | 61.32 | 61.89 |
| Bra005224.1-P | Field mustard | plasma membrane | 58.48 | 61.82 |
| KRH32536 | Soybean | plasma membrane | 61.69 | 61.24 |
| KRH19928 | Soybean | plasma membrane | 61.59 | 61.15 |
| Solyc11g069820.1.1 | Tomato | plasma membrane | 59.3 | 59.19 |
| Solyc04g025170.2.1 | Tomato | mitochondrion | 53.25 | 56.96 |
| Solyc06g075020.2.1 | Tomato | plasma membrane | 56.37 | 56.22 |
| Solyc01g105400.2.1 | Tomato | cytosol, plastid | 3.67 | 34.19 |
| Solyc03g019760.2.1 | Tomato | nucleus | 15.95 | 24.51 |
| Solyc01g105450.2.1 | Tomato | plasma membrane | 13.93 | 24.24 |
| Solyc06g072090.1.1 | Tomato | cytosol, plasma membrane, plastid | 14.48 | 23.94 |
| Solyc11g009100.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 13.75 | 23.11 |
| Solyc11g065350.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 14.3 | 22.87 |
| Solyc06g072100.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 14.76 | 22.52 |
| Solyc06g074970.1.1 | Tomato | plastid | 12.19 | 22.09 |
| Solyc05g051530.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 10.63 | 21.89 |
| Solyc11g065360.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 13.57 | 21.51 |
| Solyc11g069710.1.1 | Tomato | plastid | 14.02 | 21.16 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| UniProt:K4CQI9 | InterPro:P-loop_NTPase | PFAM:PF00005 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 |
| PANTHER:PTHR19241:SF445 | SMART:SM00382 | SUPFAM:SSF52540 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc09g008000.2 | EnsemblPlants:Solyc09g008000.2.1 |
| TMHMM:TMhelix | UniParc:UPI000276BB0D | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr9:-:1473632..1485072
Molecular Weight (calculated)
120979.0 Da
IEP (calculated)
9.295
GRAVY (calculated)
-0.131
Length
1091 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGKVRIWLPI YYLFMILVLG FSPCVWCAPP SKQTPPANAN ANPTAVPVLA SFIYGQLANL TKVFHKDITQ VLGFCIDDVD AELFEAFNFA KNLEFLNNCF
0101: KETKDVTQRL CNAAEMKFYF SSFLETKSSQ KANILKPNRN CNLTSWVPGC EPGWSCSVGK NEKVDLKNAK DMPDRTRDNQ PCCEGFFCPR GLTCMMPCPL
0201: GAFCPRATLN KTNGLCEPYS YQLPPGKVNH TCGAADRWGS ETDGGELFCS PGSYCPTTTK KVICSEGNYC RKGSTAPREC IKLSNCHKQS DKQKLHVIGF
0301: ILIGALSFIL IIFYNCSDQV INTKYQRVAK SREAAARHAR ETAQARERWG LVKDVAKKRA FGLQQQVSRS FSKKMSVKQG ARGAFNLPKT NDEASIPPKG
0401: PSSSSGKGKK KEPSDLTKMM HSIENETDNM EGFHMQIGDK NIKKQAINAK KLHTRSQIFK YAYGQLEKEK AMEQKTKNMT FSGVISMATD DNTELKTRPP
0501: IEISFKDLTI TLKKKHKHLM RSVTGKLMPG RISAVMGPSG AGKTTFLSAV AGKLTQCTLS GMVLINGRAE SIHSYKRITG FVAQDDIVHG NLTVEENLRF
0601: NARCRLAADL PKADKVLVVE RVIESLGLQA VRDSLVGTVE KRGISGGQRK RVNVGMEMVM EPSLLILDEP TSGLDSSSSN LLLKALRREA LEGVNICMVL
0701: HQPSYTLYKM FDDLVLLAKG GLVAYHGPVK KAEEYFANLG IAVPDRVNPP DHFIDVLEGM VKPGGGVTVE QLPVRWMLHN GYPVPPDMMQ LCDQIAMSSK
0801: GVASAPDQSF SVEAWHEKRD SLSHGLLKSH DLSNRNTPGV NRQYRYYLGR VGKQRLREAQ IQAADYLILL VAGACLGILS SQKGDTFGYS GYTYSIIAVS
0901: LLCKIAALRS FSLDKLEYWR ERESGMSSLA YFLSKDTIDH FNTVIKPLVY LSMFYFLNSP RSSFGTNYLV FLCLVYCVTG IAYVFAICFA PGQAQLWCVL
1001: VPVVLTLIAN QEPDSTAGKL AKFCYPRWAL EAFVVASAQR YSGVWLIARC GKLLELGFDV HSWNTSLILL ILTGVVSRLI AYVCLVCIKK K
0101: KETKDVTQRL CNAAEMKFYF SSFLETKSSQ KANILKPNRN CNLTSWVPGC EPGWSCSVGK NEKVDLKNAK DMPDRTRDNQ PCCEGFFCPR GLTCMMPCPL
0201: GAFCPRATLN KTNGLCEPYS YQLPPGKVNH TCGAADRWGS ETDGGELFCS PGSYCPTTTK KVICSEGNYC RKGSTAPREC IKLSNCHKQS DKQKLHVIGF
0301: ILIGALSFIL IIFYNCSDQV INTKYQRVAK SREAAARHAR ETAQARERWG LVKDVAKKRA FGLQQQVSRS FSKKMSVKQG ARGAFNLPKT NDEASIPPKG
0401: PSSSSGKGKK KEPSDLTKMM HSIENETDNM EGFHMQIGDK NIKKQAINAK KLHTRSQIFK YAYGQLEKEK AMEQKTKNMT FSGVISMATD DNTELKTRPP
0501: IEISFKDLTI TLKKKHKHLM RSVTGKLMPG RISAVMGPSG AGKTTFLSAV AGKLTQCTLS GMVLINGRAE SIHSYKRITG FVAQDDIVHG NLTVEENLRF
0601: NARCRLAADL PKADKVLVVE RVIESLGLQA VRDSLVGTVE KRGISGGQRK RVNVGMEMVM EPSLLILDEP TSGLDSSSSN LLLKALRREA LEGVNICMVL
0701: HQPSYTLYKM FDDLVLLAKG GLVAYHGPVK KAEEYFANLG IAVPDRVNPP DHFIDVLEGM VKPGGGVTVE QLPVRWMLHN GYPVPPDMMQ LCDQIAMSSK
0801: GVASAPDQSF SVEAWHEKRD SLSHGLLKSH DLSNRNTPGV NRQYRYYLGR VGKQRLREAQ IQAADYLILL VAGACLGILS SQKGDTFGYS GYTYSIIAVS
0901: LLCKIAALRS FSLDKLEYWR ERESGMSSLA YFLSKDTIDH FNTVIKPLVY LSMFYFLNSP RSSFGTNYLV FLCLVYCVTG IAYVFAICFA PGQAQLWCVL
1001: VPVVLTLIAN QEPDSTAGKL AKFCYPRWAL EAFVVASAQR YSGVWLIARC GKLLELGFDV HSWNTSLILL ILTGVVSRLI AYVCLVCIKK K
0001: MRVRVDVCWT QHIFLFFVFG LSFMSFALSL DGDDYSKTGN PKALVSVTNL IYTRLQNLKT VLKADVDRDL GYCIKNLKGD WNEAFNFDKN LDFLSNCVKK
0101: NDGDLTLRLC SAAEIKFYFS SFVRRDEATT VHVKPNINCN LAKWVSGCEP GWSCNADDEK RFDLNNGKIL PSRTRKCQPC CEGFFCPQGL ACMIPCPLGA
0201: YCPLAKLNKT TGFCEPYNYQ IPPGKLNHTC GSADSWVDAE SSGDMFCSPG SYCPTTIRKV TCSSGHYCRQ GSTSQKPCFK LATCNPNTAN QNIHAYGAIL
0301: IASLSLLMIM VYNCSDQVLA TREKRQAKSR EAAARHAKET TQARERWKTA KGVAKNQKMG LSAQLSQTFS RMKSARKDAT PVKASGKSKD KKKEPSNLTK
0401: MMKSMEENPS NNEGFNVGTG SKPGKKPQAP KGKQLHTQSQ IFKYAYGQIE KEKAMEQNNK NLTFSGVISM ATDTEMRTRP VIEVAFKDLT LTLKGKHKHI
0501: LRSVTGKIMP GRVSAVMGPS GAGKTTFLSA LAGKATGCTR TGLILINGRN DSINSYKKIT GFVPQDDVVH GNLTVEENLR FSARCRLSAY MSKADKVLII
0601: ERVIESLGLQ HVRDSLVGTI EKRGISGGQR KRVNVGVEMV MEPSLLILDE PTTGLDSASS QLLLRALRRE ALEGVNICMV VHQPSYTMYK MFDDMIILAK
0701: GGLTVYHGSV KKIEEYFADI GITVPDRVNP PDHYIDILEG IVKPDGDITI EQLPVRWMLH NGYPVPHDML KFCDGLPSSS TGSAQEDSTH NSFSNDLWQD
0801: VKTNVEITKD QLQHNYSNSH DNSNRVTPTV GRQYRYFVGR VGKQRLREAR LQALDFLILL VAGACLGTLA KVNDETIDTL GYTYTIIAVS LLCKISALRS
0901: FSVDKLQYWR ESAAGISSLA HFMAKDTMDH LNTIMKPLVY LSMFYFFNNP RSSFEDNYIV LVCLVYCVTG MAYIFAILYS PSAAQLLSVL VPVVMTLIAN
1001: QDKESMVLKY LGSFCYPKWT LEAFVLSNAQ RYSGVWVVTR CSSLSQNGYD LSDWILCLIV LVLMGLICRF IAYFCMVTFQ KK
0101: NDGDLTLRLC SAAEIKFYFS SFVRRDEATT VHVKPNINCN LAKWVSGCEP GWSCNADDEK RFDLNNGKIL PSRTRKCQPC CEGFFCPQGL ACMIPCPLGA
0201: YCPLAKLNKT TGFCEPYNYQ IPPGKLNHTC GSADSWVDAE SSGDMFCSPG SYCPTTIRKV TCSSGHYCRQ GSTSQKPCFK LATCNPNTAN QNIHAYGAIL
0301: IASLSLLMIM VYNCSDQVLA TREKRQAKSR EAAARHAKET TQARERWKTA KGVAKNQKMG LSAQLSQTFS RMKSARKDAT PVKASGKSKD KKKEPSNLTK
0401: MMKSMEENPS NNEGFNVGTG SKPGKKPQAP KGKQLHTQSQ IFKYAYGQIE KEKAMEQNNK NLTFSGVISM ATDTEMRTRP VIEVAFKDLT LTLKGKHKHI
0501: LRSVTGKIMP GRVSAVMGPS GAGKTTFLSA LAGKATGCTR TGLILINGRN DSINSYKKIT GFVPQDDVVH GNLTVEENLR FSARCRLSAY MSKADKVLII
0601: ERVIESLGLQ HVRDSLVGTI EKRGISGGQR KRVNVGVEMV MEPSLLILDE PTTGLDSASS QLLLRALRRE ALEGVNICMV VHQPSYTMYK MFDDMIILAK
0701: GGLTVYHGSV KKIEEYFADI GITVPDRVNP PDHYIDILEG IVKPDGDITI EQLPVRWMLH NGYPVPHDML KFCDGLPSSS TGSAQEDSTH NSFSNDLWQD
0801: VKTNVEITKD QLQHNYSNSH DNSNRVTPTV GRQYRYFVGR VGKQRLREAR LQALDFLILL VAGACLGTLA KVNDETIDTL GYTYTIIAVS LLCKISALRS
0901: FSVDKLQYWR ESAAGISSLA HFMAKDTMDH LNTIMKPLVY LSMFYFFNNP RSSFEDNYIV LVCLVYCVTG MAYIFAILYS PSAAQLLSVL VPVVMTLIAN
1001: QDKESMVLKY LGSFCYPKWT LEAFVLSNAQ RYSGVWVVTR CSSLSQNGYD LSDWILCLIV LVLMGLICRF IAYFCMVTFQ KK
Arabidopsis Description
WBC30Putative white-brown complex homolog protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJK6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.