Factsheet for Solyc01g105450.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032670	Potato	cytosol, peroxisome, plasma membrane	96.33	96.03
Solyc01g105400.2.1	Tomato	cytosol, plastid	12.6	67.52
VIT_03s0017g01290.t01	Wine grape	cytosol	66.67	64.91
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	53.91	63.77
VIT_03s0017g01280.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	67.3	62.43
VIT_03s0017g01300.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	65.71	61.13
KRH42130	Soybean	plasma membrane	61.88	60.53
KRH18202	Soybean	cytosol, nucleus, plasma membrane, plastid	66.67	60.32
KRH42133	Soybean	extracellular	65.07	58.7
KRH42131	Soybean	cytosol, nucleus, plasma membrane	64.91	58.23
KRH18189	Soybean	cytosol, peroxisome, plasma membrane	63.8	58.06
KRH18184	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	40.51	57.73
Solyc11g009100.1.1	Tomato	cytosol, peroxisome, plasma membrane	59.01	57.01
KRH18182	Soybean	cytosol	61.24	56.8
KRH42129	Soybean	cytosol, peroxisome, plasma membrane	60.61	56.05
KRH18205	Soybean	cytosol, peroxisome, plasma membrane	56.3	53.57
KRH42128	Soybean	plasma membrane	52.31	52.65
KRH42124	Soybean	cytosol	55.5	51.48
KRH18181	Soybean	cytosol, peroxisome, plasma membrane	55.02	50.29
Solyc06g072090.1.1	Tomato	cytosol, plasma membrane, plastid	49.44	46.97
KRH18188	Soybean	cytosol	46.73	46.14
Solyc03g019760.2.1	Tomato	nucleus	50.72	44.79
Solyc11g065350.1.1	Tomato	cytosol, peroxisome, plasma membrane	47.53	43.7
Solyc06g072100.1.1	Tomato	cytosol, peroxisome, plasma membrane	49.6	43.5
Solyc11g065360.1.1	Tomato	cytosol, peroxisome, plasma membrane	46.57	42.44
Solyc11g069710.1.1	Tomato	plastid	35.73	30.98
Solyc06g074970.1.1	Tomato	plastid	29.51	30.73
Solyc04g025170.2.1	Tomato	mitochondrion	23.45	14.41
Solyc09g008000.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	24.24	13.93
Solyc11g069820.1.1	Tomato	plasma membrane	24.08	13.82
Solyc06g075020.2.1	Tomato	plasma membrane	23.92	13.71

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
UniProt:K4B2B5	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF301	SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc01g105450.2	EnsemblPlants:Solyc01g105450.2.1
TMHMM:TMhelix	UniParc:UPI0002768F86	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1:-:93615869..93620183

Molecular Weight (calculated)

69699.1 Da

IEP (calculated)

8.409

GRAVY (calculated)

0.109

Length

627 amino acids

Sequence
(BLAST)

001: MNMSKNGEVL LTWEDLWVTA SSLKDGNKAI LKGLTGYAKP GQLLAIMGPS GCGKSTLLDT IAGRLGSSTR QKGDILINGR KQTLAYGTSA YVTQEDTLMA
101: TLTVKEAVYY SAELQLPNSM PKSEKKQIAD MTMKEMGLQD AMETRIGGWS GKGISGGQKR RVSICLEILT RPKLLFLDEP TSGLDSAASY YVMKTIASQC
201: QGRTIIASIH QPSTEVFSLF HSLCLLSSGR TVYFGPANAA IEFFALSGYP CPTLQNPSDH FLKTINSDFD QDIEEGQTSR KSTEEVINIL IKSYSDSDKY
301: RAVQSQVAEI CKQEGEVLEK RSRASFTTQS LVLTRRSFVN MSRDLGYYWL RLAVYIVIAV GLGTIYYDVG FSYTSIQSRG SMLMFVATFI TFMAIGGFSS
401: FVEELKVFQR EKLNGHYGSG SFVIANTLSA IPYLVLVSFI PGAIAYFLTG LQGGFEHFMC FALVLFTCMM LVESLMMIVA SIVPNFLMGL ITGAGIQAVM
501: CLSGGFFRLS NELPRVFWKY PLHYVAFHKY AYQGLFKNEF EGLKIHDENM KRLIKGEDIL KYKWEMDMDY SKWVDLAILL GMIILYRLLF LLLVKAGEKV
601: KPAVRAIMSN SPQQINSAET PLHEFAA

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.