Factsheet for Solyc06g074970.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400031312	Potato	plastid	98.34	81.88
KRG89865	Soybean	plastid	65.28	80.2
CDY30512	Canola	cytosol	53.32	77.72
Solyc11g069710.1.1	Tomato	plastid	87.54	72.89
VIT_06s0061g00350.t01	Wine grape	plastid	83.55	69.67
KRH22852	Soybean	cytosol, plastid	81.23	67.54
KRH26514	Soybean	plasma membrane, plastid	80.4	66.85
AT2G28070.1	Thale cress	plastid	80.07	66.03
CDX77150	Canola	plastid	79.4	65.48
Bra011981.1-P	Field mustard	plastid	79.57	65.44
Bra034385.1-P	Field mustard	plastid	73.92	64.59
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	73.59	60.68
CDX71393	Canola	plastid	79.07	59.65
CDY04533	Canola	mitochondrion	79.73	58.82
EER90467	Sorghum	cytosol, plasma membrane, plastid	65.45	54.57
TraesCS5D01G551400.1	Wheat	cytosol, peroxisome, plasma membrane	64.95	54.01
HORVU5Hr1G125010.1	Barley	cytosol, peroxisome, plasma membrane, plastid	64.78	53.94
TraesCS4A01G315900.1	Wheat	cytosol, peroxisome, plasma membrane	64.62	53.51
Os03t0859500-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	63.12	52.85
Solyc01g105400.2.1	Tomato	cytosol, plastid	8.47	43.59
Zm00001d034918_P003	Maize	cytosol, nucleus, plasma membrane, plastid	65.45	36.55
Solyc11g009100.1.1	Tomato	cytosol, peroxisome, plasma membrane	33.22	30.82
Solyc06g072090.1.1	Tomato	cytosol, plasma membrane, plastid	32.56	29.7
Solyc01g105450.2.1	Tomato	plasma membrane	30.73	29.51
Solyc03g019760.2.1	Tomato	nucleus	33.89	28.73
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	25.25	28.68
Solyc11g065350.1.1	Tomato	cytosol, peroxisome, plasma membrane	31.73	28.01
Solyc11g065360.1.1	Tomato	cytosol, peroxisome, plasma membrane	30.23	26.45
Solyc06g072100.1.1	Tomato	cytosol, peroxisome, plasma membrane	31.4	26.43
Solyc06g075020.2.1	Tomato	plasma membrane	23.75	13.07
Solyc04g025170.2.1	Tomato	mitochondrion	22.09	13.04
Solyc11g069820.1.1	Tomato	plasma membrane	23.09	12.72
Solyc09g008000.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	22.09	12.19

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	UniProt:K4C9L3
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF200
SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc06g074970.1	EnsemblPlants:Solyc06g074970.1.1	TMHMM:TMhelix	UniParc:UPI00027667A5
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6:-:46466379..46473946

Molecular Weight (calculated)

66840.2 Da

IEP (calculated)

8.888

GRAVY (calculated)

0.169

Length

602 amino acids

Sequence
(BLAST)

001: MEEIQSQSDH YRSPSSSVSS PANRVPSSNY FYSRKPGALR QPISFEDSPV WDETDIEVKV DEGGDSINAA TTPPSPSLSK INSGSLPSPS SIEREVVTRK
101: IAGASIAWKD LTVTIKGKRK YSDKVVKSSH GYALPGTMTV IMGPAKSGKS TLLRALAGRL PDSTRMYGEV FVNGTRRHMP YGSYGYVDRE TTLIGSLSVR
201: EFLYYSALLQ LPGFFCQRRS VVEDAIDAMS LGDYANKLIG GNCYTKGLRS GERRRVSIAR ELVMRPHILF IDEPLYHLDS VSALLMMVTL KKLATSGCTL
301: IFTICQSSTE VFGLFDRICL LSNGKTLFFG ETLACLQHFS NAGFPCPIMQ SPSDHFLRAI NTEFDRIIAM CKSWQDNHGD LSSVSMDTAI AIRTIETTYR
401: SSADAAAVES MIVKLTEKEG PSLKRKGMAG NATRVAVLTW RSLLIMSREW KYYWLRLILY VFLALCIGTV FSGLGQSLFS VMRRVAAIFV FVSFTSLLGV
501: AGVPSQLKEI KIYTYEESNQ HSGAFVFLLG QLFASIPFLF LISISSSLVF YFLIGLRHEF SLLMYFVLNF FACLLVNEGL LLLVASICQN IFWSILSFVS
601: IH

Best Arabidopsis Sequence Match ( AT2G28070.2 )
(BLAST)

001: MEEIQSQSDL YRSSSSSASS PTSRVPSSHF FYVRKPGSLR QPISFEDSPE WEDTPDVDLR MEDEAGGGDS INDATTTPVS PSLSKMNSGS MASPPVPEGG
101: AGTGVVRKIA GASIAWKDLT VTMKGKRKYS DKVVKSSNGY AFPGTMTVIM GPAKSGKSTL LRALAGRLPP SAKMYGEVFV NGSKSHMPYG SYGFVERETQ
201: LIGSLTVREF LYYSALLQLP GFLFQKRSVV EDAIQAMSLS DYANKLIGGH CYMKGLRSGE RRRVSIAREL VMRPHILFID EPLYHLDSVS ALLMMVTLKK
301: LASMGCTLVF TIYQSSTEVF GLFDRICLLS NGNTLFFGET LACLQHFSNA GFPCPIMQSP SDHFLRAINT DFDRIIAMCK NWQDDNGDFS AVNMDTAVAI
401: RTLEATYKSS ADADSVEAMI IKLTEREGTQ LKSKGKAGAA TRVAVLTWRS LLVMSREWKY YWLRLILYMI LTLSIGTLYS GLGHSLSSVA TRVAAVFVFV
501: SFASLLGIAG IPSLLKEIKI YRSEASNQHS GAFVFLLGQF LGSIPFLFLM SISSSLVFYF MVGLRDDFSL LMYFVLNFFM CLLVNEGLML FIACIWRDVY
601: WSTLTLISVH VIMMLAAGHF RIRTALPKPV WTYPFAYISF HTYSIEGLLE NEYLGEVFAV GEVRSISGYQ AIQGNYQISP DTNAKWRNML VLLAMAFGYR
701: LLVYVLLRFG LNKNVSGRLL LSHKKNNSSR

Arabidopsis Description

ABCG3ABC transporter G family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.