Factsheet for TraesCS4A01G315900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

mitochondrion 1
cytosol 1
plastid 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G551400.1	Wheat	cytosol, peroxisome, plasma membrane	96.7	97.1
HORVU5Hr1G125010.1	Barley	cytosol, peroxisome, plasma membrane, plastid	94.64	95.16
EER90467	Sorghum	cytosol, plasma membrane, plastid	80.88	81.44
Os03t0859500-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	77.17	78.03
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	70.43	70.14
VIT_06s0061g00350.t01	Wine grape	plastid	66.85	67.31
KRG89865	Soybean	plastid	44.98	66.73
KRH22852	Soybean	cytosol, plastid	65.34	65.61
KRH26514	Soybean	plasma membrane, plastid	64.92	65.19
Solyc06g074970.1.1	Tomato	plastid	53.51	64.62
Solyc11g069710.1.1	Tomato	plastid	63.14	63.49
PGSC0003DMT400050589	Potato	plastid	62.86	63.21
AT2G28070.1	Thale cress	plastid	63.14	62.88
CDY30512	Canola	cytosol	35.49	62.47
CDX77150	Canola	plastid	62.59	62.33
Bra011981.1-P	Field mustard	plastid	62.59	62.16
PGSC0003DMT400031312	Potato	plastid	61.07	61.41
Bra034385.1-P	Field mustard	plastid	57.91	61.1
CDX71393	Canola	plastid	62.72	57.14
CDY04533	Canola	mitochondrion	62.86	56.0
Zm00001d034918_P003	Maize	cytosol, nucleus, plasma membrane, plastid	79.23	53.43
TraesCS5A01G249900.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	32.87	32.61
TraesCS2A01G374100.1	Wheat	plasma membrane	32.19	32.59
TraesCS2A01G110200.1	Wheat	plastid	29.44	31.89
TraesCS1A01G164500.1	Wheat	cytosol	29.44	31.2
TraesCS6A01G140300.2	Wheat	plastid	30.12	30.89
TraesCS4A01G308200.1	Wheat	plastid	29.44	30.62
TraesCS1A01G126900.1	Wheat	nucleus, peroxisome, plasma membrane	28.34	29.9
TraesCS7A01G566200.1	Wheat	plasma membrane, plastid	28.34	29.81
TraesCS1A01G141400.1	Wheat	mitochondrion, plasma membrane	18.02	14.04
TraesCS2A01G049700.2	Wheat	plasma membrane	18.71	12.59
TraesCS6A01G395000.2	Wheat	plasma membrane, plastid	18.43	10.76

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF01061	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF200	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4A01G315900	EnsemblPlants:TraesCS4A01G315900.1	TIGR:cd03213	SEG:seg

Description

No Description!

Coordinates

chr4A:+:605744972..605749290

Molecular Weight (calculated)

79650.7 Da

IEP (calculated)

8.845

GRAVY (calculated)

0.288

Length

727 amino acids

Sequence
(BLAST)

001: MEAPSSDQYR SSSSSAGSPS APAGGAGRRY YFPRPGRPVS FEDSPDWGDD ITVDAAAHAA DSSSSIHLAS ASASAASSAY PSPSTSLPGP SASASGSGFR
101: ERKVAGAALV WKELSVSVRD GRRPGRVVRG SSGYALPGTL TVVMGPARSG KSTLLRAIAG RLRGAERMYG DVFVNGVKSP LPYGSYGYVD RDDVLIESLT
201: VREMLYYSAL LQLPSVFSSN KSFVEDAIAA MSLGDHADKL IGGHCFTKRL PTGERRRVSI ARELVMRPHV LFIDEPLYHL DSVSALLLMV TLKKLASTGC
301: TVIFTMYQSS TEVFGLFDRI CLLSNGNTLF FGETLACLQH FSNAGFPCPI MQSPSDHFLR AINTDFDRII AMCKNLQDDQ GDFSSVSMDT AVAIRTLEAT
401: YKSSAEAAAV ELMIAKLIEK EGPYLKSKGR ASDAARIGIL TWRSLLIMSR DWKYFWSRLV LYMLLALSIG TIFIDIGHSL SSVVVRISAI FVFVSFLVLL
501: SVCGVPAHID EIKIYSHEDS NRHSGTLVFL LGHFLSSIPF LFLVSISSSL VFYFLIGLRN EFSFLMYFII TIFTCLLANE ALMMIVAYIW LETYKCTLTL
601: ICLYVVMMLV AGYFRIRDAI PVAVWNYPLS YISFHTYAVQ GLVENEYVDT SFAVGATRTI PGVQAVRGSY GISSSAGAKW MNLLVLLLMA IGYRVVLYVL
701: LRLDVRRHVR LGRRSCWPSI HTSAAPK

Best Arabidopsis Sequence Match ( AT2G28070.2 )
(BLAST)

001: MEEIQSQSDL YRSSSSSASS PTSRVPSSHF FYVRKPGSLR QPISFEDSPE WEDTPDVDLR MEDEAGGGDS INDATTTPVS PSLSKMNSGS MASPPVPEGG
101: AGTGVVRKIA GASIAWKDLT VTMKGKRKYS DKVVKSSNGY AFPGTMTVIM GPAKSGKSTL LRALAGRLPP SAKMYGEVFV NGSKSHMPYG SYGFVERETQ
201: LIGSLTVREF LYYSALLQLP GFLFQKRSVV EDAIQAMSLS DYANKLIGGH CYMKGLRSGE RRRVSIAREL VMRPHILFID EPLYHLDSVS ALLMMVTLKK
301: LASMGCTLVF TIYQSSTEVF GLFDRICLLS NGNTLFFGET LACLQHFSNA GFPCPIMQSP SDHFLRAINT DFDRIIAMCK NWQDDNGDFS AVNMDTAVAI
401: RTLEATYKSS ADADSVEAMI IKLTEREGTQ LKSKGKAGAA TRVAVLTWRS LLVMSREWKY YWLRLILYMI LTLSIGTLYS GLGHSLSSVA TRVAAVFVFV
501: SFASLLGIAG IPSLLKEIKI YRSEASNQHS GAFVFLLGQF LGSIPFLFLM SISSSLVFYF MVGLRDDFSL LMYFVLNFFM CLLVNEGLML FIACIWRDVY
601: WSTLTLISVH VIMMLAAGHF RIRTALPKPV WTYPFAYISF HTYSIEGLLE NEYLGEVFAV GEVRSISGYQ AIQGNYQISP DTNAKWRNML VLLAMAFGYR
701: LLVYVLLRFG LNKNVSGRLL LSHKKNNSSR

Arabidopsis Description

ABCG3ABC transporter G family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.