Factsheet for Zm00001d034918_P003

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, nucleus, cytosol

Predictor Summary:

mitochondrion 1
cytosol 1
plastid 2
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90467	Sorghum	cytosol, plasma membrane, plastid	62.89	93.91
HORVU5Hr1G125010.1	Barley	cytosol, peroxisome, plasma membrane, plastid	53.62	79.94
TraesCS5D01G551400.1	Wheat	cytosol, peroxisome, plasma membrane	53.25	79.28
TraesCS4A01G315900.1	Wheat	cytosol, peroxisome, plasma membrane	53.43	79.23
Os03t0859500-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	51.21	76.77
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	47.96	70.82
VIT_06s0061g00350.t01	Wine grape	plastid	45.64	68.14
KRG89865	Soybean	plastid	30.33	66.73
KRH22852	Soybean	cytosol, plastid	44.06	65.61
Solyc06g074970.1.1	Tomato	plastid	36.55	65.45
Solyc11g069710.1.1	Tomato	plastid	43.88	65.42
KRH26514	Soybean	plasma membrane, plastid	43.88	65.33
PGSC0003DMT400050589	Potato	plastid	43.6	65.01
CDY30512	Canola	cytosol	24.86	64.89
AT2G28070.1	Thale cress	plastid	43.23	63.84
PGSC0003DMT400031312	Potato	plastid	42.3	63.07
Bra011981.1-P	Field mustard	plastid	42.76	62.98
CDX77150	Canola	plastid	42.12	62.19
Bra034385.1-P	Field mustard	plastid	39.33	61.54
CDX71393	Canola	plastid	42.76	57.77
CDY04533	Canola	mitochondrion	42.95	56.74
Zm00001d002871_P001	Maize	cytosol, peroxisome, plasma membrane	22.54	33.7
Zm00001d013960_P001	Maize	cytosol, peroxisome, plasma membrane	21.61	32.82
Zm00001d020811_P001	Maize	nucleus, peroxisome, plasma membrane, plastid	21.8	31.93
Zm00001d032601_P002	Maize	cytosol, peroxisome, plasma membrane	21.34	31.25
Zm00001d010426_P001	Maize	plastid	19.57	30.58
Zm00001d048621_P001	Maize	plastid	20.32	30.42
Zm00001d019398_P001	Maize	plastid	19.11	29.73
Zm00001d032855_P002	Maize	plasma membrane	12.34	15.06
Zm00001d046068_P001	Maize	plasma membrane	12.43	12.88
Zm00001d018500_P002	Maize	plasma membrane	13.17	12.77
Zm00001d025031_P001	Maize	plasma membrane	12.24	11.99
Zm00001d004335_P001	Maize	plasma membrane	11.97	11.79

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:100384071	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A1D6LCF3	InterPro:AAA+_ATPase
InterPro:ABC_2_trans	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:IPR006630	InterPro:IPR036388	InterPro:La_HTH
ProteinID:ONM11754.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PFAM:PF05383	PFscan:PS50893
PFscan:PS50961	PANTHER:PTHR19241	PANTHER:PTHR19241:SF200	SMART:SM00382	SMART:SM00715	SUPFAM:SSF46785
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0008450D37	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	EnsemblPlantsGene:Zm00001d034918
EnsemblPlants:Zm00001d034918_P003	EnsemblPlants:Zm00001d034918_T003	SEG:seg	:	:	:

Description

ABC transporter G family member 3

Coordinates

chr1:-:305584151..305593344

Molecular Weight (calculated)

117408.0 Da

IEP (calculated)

8.275

GRAVY (calculated)

-0.077

Length

1078 amino acids

Sequence
(BLAST)

0001: MEVVASSDQY RSSSSSASSP ARRYYLPKPG ALRRPISFED SPDWDDIHPD DTIHLATAAS ASISIASSAY PSPSPSLPQG SSSASAACRD RKVAGVTLVW
0101: KDLTVSSLAA ATNRFSDRLV KSSNGYALPA TLTVIMGPAR SGKSTLLRAI AGRLSSTERI YGEVFVNGAK SPLPYGSYGY VDRDDVLIES LTVREMLYFS
0201: ALLQLPGFLS SKKAIVEDAI AAMSLGDHAD KLIGGNCFMT RLPTGERRRV SIARELVMRP HVLFIDEPLY NLDSVSALLL MVTLKKLAST GCTIIFTMYQ
0301: SSTEVFGLFD RICLLSNGNT LFFGETLACL QHFSNAGFPC PIMQSPSDHF LRAINTDFDR IIAMCKNFQD DQGDFSSVSM DTAVAIRTLE ATYKQSADSV
0401: AVESMIAKLT EKEGPCLKGK GRASDAARIV VLTWRSLLIM SRDWKYFWIR LVLYMLIAVS IGTIFTDIGH SLSSVMVRIS AIFAFVSFVI LLSASGVPAQ
0501: IDEVKIYSHE EANRHSGTMV FLLGNLLSSI PFLFLVSILS SLVFYFLIGL RNEFSSLMYF VTTIFVCLLA NEALMMVISY IWLETYKCTL TLVFLHVIMM
0601: LVAGYLRIRE NLPYPVWTYP LSFISFHTYA VQGLVENEYV GTSFAVGQIR TIPGVQAVRG SYDISSSPNA KWVNLLVLLL MALGYRILLY LLLRLDTAGA
0701: CGRSVHMRNA VANSSSSQKH GAHHGRHKSA RRIGGGGDHS PRDHPDRNVA AGWDHAAGGG GGRGAQRNHN NGGGRRGNGA PASATGPSHH GSGAGGGSGG
0801: GFGARRRGAY EPPFYRGPPP PMGMGHYMRG APPPPPMTVA PPFMGPPPPP VSSMRPYAGP MMFHDMPSPM SPVSPIYFYG PPPPEALRGL PLAPPMVGPP
0901: AYPYFQAQPE PEPQPDPEPD AEEERVKLLK QIEFYFSKEN LCSDVYLRQQ MDGQGWVDLS LIAGFKKVQG LKKDLQYIKE TVQSSSVLEM KDNKIRKHGD
1001: WEKWVIPRES NPDAPSRLAS VSRPNVNNLT SHLGGMGLHE SASSTGAEEL NHHDVVQNGS PSGKEPAAED SSGQQELQ

Best Arabidopsis Sequence Match ( AT2G28070.2 )
(BLAST)

001: MEEIQSQSDL YRSSSSSASS PTSRVPSSHF FYVRKPGSLR QPISFEDSPE WEDTPDVDLR MEDEAGGGDS INDATTTPVS PSLSKMNSGS MASPPVPEGG
101: AGTGVVRKIA GASIAWKDLT VTMKGKRKYS DKVVKSSNGY AFPGTMTVIM GPAKSGKSTL LRALAGRLPP SAKMYGEVFV NGSKSHMPYG SYGFVERETQ
201: LIGSLTVREF LYYSALLQLP GFLFQKRSVV EDAIQAMSLS DYANKLIGGH CYMKGLRSGE RRRVSIAREL VMRPHILFID EPLYHLDSVS ALLMMVTLKK
301: LASMGCTLVF TIYQSSTEVF GLFDRICLLS NGNTLFFGET LACLQHFSNA GFPCPIMQSP SDHFLRAINT DFDRIIAMCK NWQDDNGDFS AVNMDTAVAI
401: RTLEATYKSS ADADSVEAMI IKLTEREGTQ LKSKGKAGAA TRVAVLTWRS LLVMSREWKY YWLRLILYMI LTLSIGTLYS GLGHSLSSVA TRVAAVFVFV
501: SFASLLGIAG IPSLLKEIKI YRSEASNQHS GAFVFLLGQF LGSIPFLFLM SISSSLVFYF MVGLRDDFSL LMYFVLNFFM CLLVNEGLML FIACIWRDVY
601: WSTLTLISVH VIMMLAAGHF RIRTALPKPV WTYPFAYISF HTYSIEGLLE NEYLGEVFAV GEVRSISGYQ AIQGNYQISP DTNAKWRNML VLLAMAFGYR
701: LLVYVLLRFG LNKNVSGRLL LSHKKNNSSR

Arabidopsis Description

ABCG3ABC transporter G family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.