Factsheet for Bra011981.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G28070.1	Thale cress	plastid	93.72	93.97
Bra034385.1-P	Field mustard	plastid	85.66	91.0
CDX71393	Canola	plastid	98.22	90.1
CDY04533	Canola	mitochondrion	99.59	89.34
KRG89865	Soybean	plastid	54.64	81.63
Solyc06g074970.1.1	Tomato	plastid	65.44	79.57
VIT_06s0061g00350.t01	Wine grape	plastid	78.28	79.36
KRH22852	Soybean	cytosol, plastid	78.14	79.01
KRH26514	Soybean	plasma membrane, plastid	78.01	78.87
PGSC0003DMT400050589	Potato	plastid	76.64	77.59
Solyc11g069710.1.1	Tomato	plastid	76.64	77.59
PGSC0003DMT400031312	Potato	plastid	74.45	75.38
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	68.72	68.9
EER90467	Sorghum	cytosol, plasma membrane, plastid	63.52	64.4
TraesCS5D01G551400.1	Wheat	cytosol, peroxisome, plasma membrane	62.84	63.54
HORVU5Hr1G125010.1	Barley	cytosol, peroxisome, plasma membrane, plastid	62.7	63.49
TraesCS4A01G315900.1	Wheat	cytosol, peroxisome, plasma membrane	62.16	62.59
Os03t0859500-01	Rice	cytosol, mitochondrion, plasma membrane, plastid	60.52	61.61
Zm00001d034918_P003	Maize	cytosol, nucleus, plasma membrane, plastid	62.98	42.76
Bra016584.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.38	33.81
Bra025944.1-P	Field mustard	cytosol, peroxisome, plasma membrane	31.01	33.58
Bra030437.1-P	Field mustard	nucleus, peroxisome, plasma membrane	30.6	32.37
Bra031249.1-P	Field mustard	peroxisome	30.19	31.98
Bra018911.1-P	Field mustard	plastid	27.32	31.75
Bra038121.1-P	Field mustard	plasma membrane	19.95	13.85
Bra005224.1-P	Field mustard	plasma membrane	19.26	13.66
Bra039668.1-P	Field mustard	plasma membrane	19.81	13.35
Bra028945.1-P	Field mustard	plasma membrane	19.95	12.73
Bra039669.1-P	Field mustard	cytosol, peroxisome, plasma membrane	19.26	12.47

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	EnsemblPlantsGene:Bra011981
EnsemblPlants:Bra011981.1	EnsemblPlants:Bra011981.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
InterPro:IPR003439	UniProt:M4D673	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF200	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002541947
SEG:seg	:	:	:	:	:

Description

AT2G28070 (E=0.0) | ABC transporter family protein

Coordinates

chrA07:+:10785858..10789075

Molecular Weight (calculated)

81155.6 Da

IEP (calculated)

8.831

GRAVY (calculated)

0.140

Length

732 amino acids

Sequence
(BLAST)

001: MEEIQSQSDL YRSSSSCASS PTSRVPSSHF FYVRKPGSLR QPISFEDSPE WDDPDARMEY EAGGVGGGGG DSINDATATP ISPSLSKINS GSMASPHVPE
101: GGGGNAVRKI AGASIAWRDL TVTMTGKRKY SDKVVKSSNG YAFPGTMTVI MGPAKSGKST LLRALAGRLP PSAKMYGEVF VNGSKSHMPY GSYGYVERET
201: ELIGSLTVRE FLYYSALLQL PGFLFQKRGV VEDAIQAMSL SDYANKLIGG HCYMKGLRSG ERRRVSIARE LVMRPHILFI DEPLYHLDSV SALLMMVTLK
301: KLASMGCTLV FTIYQSSTEV FGLFDRICLL SNGNTLFFGE TLACLQHFSN AGFPCPIMQS PSDHFLRAIN TDFDRIIAMC KNWQDDNGDF SAVNMDTAVA
401: IRTLEATYRS SEDAASVETM IFKLTEREGT QLKSKGKAGA ATRVAVLTWR SLLVMSREWK YYWLRLILYM ILTLCIGTLY SGLGHSLSSV ATRVSAVFVF
501: VSFASLLGIA GIPSLLKEIK IYGSEASNQH SGAFVFLLGQ FLGSIPFLFL MSISSSLVFY FMVGLRDDFS LLMYFVLNFF MCLLVNEGLM LFIACLWRDV
601: YWSTLTLIST HVIMMLAAGH FRIRNALPKP VWTYPLAYIS FHTYSIEGLL ENEYLGEVFA VGEVRSISGY EAIRGDYQIS PDTSSKWRNM LVLLAMAFGY
701: RLIVYVLLRF GLNKNVSARL LLCHRKNNSS SR

Best Arabidopsis Sequence Match ( AT2G28070.2 )
(BLAST)

001: MEEIQSQSDL YRSSSSSASS PTSRVPSSHF FYVRKPGSLR QPISFEDSPE WEDTPDVDLR MEDEAGGGDS INDATTTPVS PSLSKMNSGS MASPPVPEGG
101: AGTGVVRKIA GASIAWKDLT VTMKGKRKYS DKVVKSSNGY AFPGTMTVIM GPAKSGKSTL LRALAGRLPP SAKMYGEVFV NGSKSHMPYG SYGFVERETQ
201: LIGSLTVREF LYYSALLQLP GFLFQKRSVV EDAIQAMSLS DYANKLIGGH CYMKGLRSGE RRRVSIAREL VMRPHILFID EPLYHLDSVS ALLMMVTLKK
301: LASMGCTLVF TIYQSSTEVF GLFDRICLLS NGNTLFFGET LACLQHFSNA GFPCPIMQSP SDHFLRAINT DFDRIIAMCK NWQDDNGDFS AVNMDTAVAI
401: RTLEATYKSS ADADSVEAMI IKLTEREGTQ LKSKGKAGAA TRVAVLTWRS LLVMSREWKY YWLRLILYMI LTLSIGTLYS GLGHSLSSVA TRVAAVFVFV
501: SFASLLGIAG IPSLLKEIKI YRSEASNQHS GAFVFLLGQF LGSIPFLFLM SISSSLVFYF MVGLRDDFSL LMYFVLNFFM CLLVNEGLML FIACIWRDVY
601: WSTLTLISVH VIMMLAAGHF RIRTALPKPV WTYPFAYISF HTYSIEGLLE NEYLGEVFAV GEVRSISGYQ AIQGNYQISP DTNAKWRNML VLLAMAFGYR
701: LLVYVLLRFG LNKNVSGRLL LSHKKNNSSR

Arabidopsis Description

ABCG3ABC transporter G family member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.