Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 4
- golgi 4
- plasma membrane 6
- endoplasmic reticulum 4
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74994 | Canola | plasma membrane | 99.81 | 95.28 |
| CDX91328 | Canola | plasma membrane | 99.71 | 95.19 |
| AT2G37010.1 | Thale cress | plasma membrane | 90.99 | 86.78 |
| VIT_08s0040g01620.t01 | Wine grape | cytosol | 69.48 | 64.42 |
| KRH19928 | Soybean | plasma membrane | 64.73 | 60.78 |
| KRH32536 | Soybean | plasma membrane | 64.53 | 60.6 |
| Solyc09g008000.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 61.82 | 58.48 |
| Bra028945.1-P | Field mustard | plasma membrane | 61.14 | 55.01 |
| Bra038121.1-P | Field mustard | plasma membrane | 54.65 | 53.51 |
| Bra039668.1-P | Field mustard | plasma membrane | 56.01 | 53.22 |
| Bra039669.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 55.14 | 50.31 |
| Bra016584.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 16.18 | 23.82 |
| Bra025944.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 15.6 | 23.82 |
| Bra030437.1-P | Field mustard | nucleus, peroxisome, plasma membrane | 14.83 | 22.11 |
| Bra031249.1-P | Field mustard | peroxisome | 14.34 | 21.42 |
| Bra018911.1-P | Field mustard | plastid | 12.79 | 20.95 |
| Bra011981.1-P | Field mustard | plastid | 13.66 | 19.26 |
| Bra034385.1-P | Field mustard | plastid | 12.5 | 18.72 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | EnsemblPlantsGene:Bra005224 |
| EnsemblPlants:Bra005224.1 | EnsemblPlants:Bra005224.1-P | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0009506 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 | UniProt:M4CLY7 | InterPro:P-loop_NTPase | PFAM:PF00005 |
| ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS51257 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF445 | SMART:SM00382 |
| SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI0002547A96 | SEG:seg | : | : |
Description
AT2G37010 (E=0.0) ATNAP12 | ATNAP12; transporter
Coordinates
chrA05:-:4108683..4113352
Molecular Weight (calculated)
114991.0 Da
IEP (calculated)
9.061
GRAVY (calculated)
-0.162
Length
1032 amino acids
Sequence
(BLAST)
(BLAST)
0001: MRRFRIDVGW FQHILFFFVC GLGFISLASC LDGDDYSKTG NPKVLVPVTN LIYNRLQSLK NVLKADIDRD LGYCIKNLKD DWDEAFDFDK NLDFLSNCIK
0101: KTDGDITLRL CSAAEIKFYF SSFVRRDEVT TVHVKPNVNC NLAKWVSGCE PGWSCNADDD KKFDIKNGKV LPSRTRKCQP CCEGFFCPQG LACMIPCPLG
0201: AYCPLAKLNK ATGVCEPHYC RQGSTSQKPC FKLATCNPNT ANQNIHAYGA ILIASLSLLM IMIYNCSDQV LATREKRQAK SREAAARHAK ETTQARERWK
0301: SARDAAKNPK MGLTAQLSQT FSRMTSKKDT PDKASGKSKD KKKGPSNLTK MMKSMEDNSS NHEGFNVGTG GSKPGKKPQA PKGKQLHTQS QIFKYAYGQI
0401: EKEKAMEQNN QNLTFSGVIS MAQDTEIRSR PVIEVAFKDL TLTLKGKHKQ ILRSVTGKIM PGRVSAVMGP SGAGKTTFLS ALAGKSTGCT RAGLILINGK
0501: NESINSYKKI TGFVPQDDVV HGNLTVEENL RFSARCRLSA YMPKAEKVLI IERVIESLGL QHVRDSLVGT VEKRGISGGQ RKRVNVGVEM VMEPSLLILD
0601: EPTTGLDSAS SQLLLRALRR EAVEGVNICM VVHQPSYTMY KMFDDMILLA KGGLTAYHGS VKKIEEYFAG IGITVPDRVN PPDHYIDILE GIVKPNSDIT
0701: IEQLPVRWML HNGYPVPHDM LKLCDGLPSS SGSAQNDSTD NSFSNDLWQD VKTNVEIQKD QLQDNYSNSQ DNSNRVTPTV GRQYRYFMGR IGKQRLREAR
0801: LQALDLLILL VAGACLGTLA KVNDETINSL GYTYTIIAVS LLCKISALRS FSVDKIQYWR ESAAGISSLA HFMAKDTMDH LNTIIKPLVY LSMFYFFNNP
0901: RSSFEDNYIV LVCLVYCVTG MAYVFAILYS ASAAQLMSVL VPVVLTLIAN QDRDSIVLKY LGSFCYPKWT LEAFVLSNAQ RYSGVWVVTR CSSLSQYGYD
1001: LSDWLLCLIV LVLMGVICRF IAYFCMVTFK KL
0101: KTDGDITLRL CSAAEIKFYF SSFVRRDEVT TVHVKPNVNC NLAKWVSGCE PGWSCNADDD KKFDIKNGKV LPSRTRKCQP CCEGFFCPQG LACMIPCPLG
0201: AYCPLAKLNK ATGVCEPHYC RQGSTSQKPC FKLATCNPNT ANQNIHAYGA ILIASLSLLM IMIYNCSDQV LATREKRQAK SREAAARHAK ETTQARERWK
0301: SARDAAKNPK MGLTAQLSQT FSRMTSKKDT PDKASGKSKD KKKGPSNLTK MMKSMEDNSS NHEGFNVGTG GSKPGKKPQA PKGKQLHTQS QIFKYAYGQI
0401: EKEKAMEQNN QNLTFSGVIS MAQDTEIRSR PVIEVAFKDL TLTLKGKHKQ ILRSVTGKIM PGRVSAVMGP SGAGKTTFLS ALAGKSTGCT RAGLILINGK
0501: NESINSYKKI TGFVPQDDVV HGNLTVEENL RFSARCRLSA YMPKAEKVLI IERVIESLGL QHVRDSLVGT VEKRGISGGQ RKRVNVGVEM VMEPSLLILD
0601: EPTTGLDSAS SQLLLRALRR EAVEGVNICM VVHQPSYTMY KMFDDMILLA KGGLTAYHGS VKKIEEYFAG IGITVPDRVN PPDHYIDILE GIVKPNSDIT
0701: IEQLPVRWML HNGYPVPHDM LKLCDGLPSS SGSAQNDSTD NSFSNDLWQD VKTNVEIQKD QLQDNYSNSQ DNSNRVTPTV GRQYRYFMGR IGKQRLREAR
0801: LQALDLLILL VAGACLGTLA KVNDETINSL GYTYTIIAVS LLCKISALRS FSVDKIQYWR ESAAGISSLA HFMAKDTMDH LNTIIKPLVY LSMFYFFNNP
0901: RSSFEDNYIV LVCLVYCVTG MAYVFAILYS ASAAQLMSVL VPVVLTLIAN QDRDSIVLKY LGSFCYPKWT LEAFVLSNAQ RYSGVWVVTR CSSLSQYGYD
1001: LSDWLLCLIV LVLMGVICRF IAYFCMVTFK KL
0001: MRVRVDVCWT QHIFLFFVFG LSFMSFALSL DGDDYSKTGN PKALVSVTNL IYTRLQNLKT VLKADVDRDL GYCIKNLKGD WNEAFNFDKN LDFLSNCVKK
0101: NDGDLTLRLC SAAEIKFYFS SFVRRDEATT VHVKPNINCN LAKWVSGCEP GWSCNADDEK RFDLNNGKIL PSRTRKCQPC CEGFFCPQGL ACMIPCPLGA
0201: YCPLAKLNKT TGFCEPYNYQ IPPGKLNHTC GSADSWVDAE SSGDMFCSPG SYCPTTIRKV TCSSGHYCRQ GSTSQKPCFK LATCNPNTAN QNIHAYGAIL
0301: IASLSLLMIM VYNCSDQVLA TREKRQAKSR EAAARHAKET TQARERWKTA KGVAKNQKMG LSAQLSQTFS RMKSARKDAT PVKASGKSKD KKKEPSNLTK
0401: MMKSMEENPS NNEGFNVGTG SKPGKKPQAP KGKQLHTQSQ IFKYAYGQIE KEKAMEQNNK NLTFSGVISM ATDTEMRTRP VIEVAFKDLT LTLKGKHKHI
0501: LRSVTGKIMP GRVSAVMGPS GAGKTTFLSA LAGKATGCTR TGLILINGRN DSINSYKKIT GFVPQDDVVH GNLTVEENLR FSARCRLSAY MSKADKVLII
0601: ERVIESLGLQ HVRDSLVGTI EKRGISGGQR KRVNVGVEMV MEPSLLILDE PTTGLDSASS QLLLRALRRE ALEGVNICMV VHQPSYTMYK MFDDMIILAK
0701: GGLTVYHGSV KKIEEYFADI GITVPDRVNP PDHYIDILEG IVKPDGDITI EQLPVRWMLH NGYPVPHDML KFCDGLPSSS TGSAQEDSTH NSFSNDLWQD
0801: VKTNVEITKD QLQHNYSNSH DNSNRVTPTV GRQYRYFVGR VGKQRLREAR LQALDFLILL VAGACLGTLA KVNDETIDTL GYTYTIIAVS LLCKISALRS
0901: FSVDKLQYWR ESAAGISSLA HFMAKDTMDH LNTIMKPLVY LSMFYFFNNP RSSFEDNYIV LVCLVYCVTG MAYIFAILYS PSAAQLLSVL VPVVMTLIAN
1001: QDKESMVLKY LGSFCYPKWT LEAFVLSNAQ RYSGVWVVTR CSSLSQNGYD LSDWILCLIV LVLMGLICRF IAYFCMVTFQ KK
0101: NDGDLTLRLC SAAEIKFYFS SFVRRDEATT VHVKPNINCN LAKWVSGCEP GWSCNADDEK RFDLNNGKIL PSRTRKCQPC CEGFFCPQGL ACMIPCPLGA
0201: YCPLAKLNKT TGFCEPYNYQ IPPGKLNHTC GSADSWVDAE SSGDMFCSPG SYCPTTIRKV TCSSGHYCRQ GSTSQKPCFK LATCNPNTAN QNIHAYGAIL
0301: IASLSLLMIM VYNCSDQVLA TREKRQAKSR EAAARHAKET TQARERWKTA KGVAKNQKMG LSAQLSQTFS RMKSARKDAT PVKASGKSKD KKKEPSNLTK
0401: MMKSMEENPS NNEGFNVGTG SKPGKKPQAP KGKQLHTQSQ IFKYAYGQIE KEKAMEQNNK NLTFSGVISM ATDTEMRTRP VIEVAFKDLT LTLKGKHKHI
0501: LRSVTGKIMP GRVSAVMGPS GAGKTTFLSA LAGKATGCTR TGLILINGRN DSINSYKKIT GFVPQDDVVH GNLTVEENLR FSARCRLSAY MSKADKVLII
0601: ERVIESLGLQ HVRDSLVGTI EKRGISGGQR KRVNVGVEMV MEPSLLILDE PTTGLDSASS QLLLRALRRE ALEGVNICMV VHQPSYTMYK MFDDMIILAK
0701: GGLTVYHGSV KKIEEYFADI GITVPDRVNP PDHYIDILEG IVKPDGDITI EQLPVRWMLH NGYPVPHDML KFCDGLPSSS TGSAQEDSTH NSFSNDLWQD
0801: VKTNVEITKD QLQHNYSNSH DNSNRVTPTV GRQYRYFVGR VGKQRLREAR LQALDFLILL VAGACLGTLA KVNDETIDTL GYTYTIIAVS LLCKISALRS
0901: FSVDKLQYWR ESAAGISSLA HFMAKDTMDH LNTIMKPLVY LSMFYFFNNP RSSFEDNYIV LVCLVYCVTG MAYIFAILYS PSAAQLLSVL VPVVMTLIAN
1001: QDKESMVLKY LGSFCYPKWT LEAFVLSNAQ RYSGVWVVTR CSSLSQNGYD LSDWILCLIV LVLMGLICRF IAYFCMVTFQ KK
Arabidopsis Description
WBC30Putative white-brown complex homolog protein 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJK6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.