Factsheet for Solyc11g065350.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008950.2.1
Solyc06g065380.2.1
Solyc07g053970.2.1
Solyc10g077010.1.1
Solyc10g081170.1.1
Solyc11g018610.1.1
Solyc11g072240.1.1
Solyc12g099990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51500.1	Solyc01g008950.2.1	AT3G56800.1	15299147
AT1G51500.1	Solyc10g077010.1.1	AT3G56800.1	15299147
AT1G51500.1	Solyc10g081170.1.1	AT3G56800.1	15299147
AT1G51500.1	Solyc11g072240.1.1	AT3G56800.1	15299147
AT1G51500.1	Solyc12g099990.1.1	AT3G56800.1	15299147
AT1G51500.1	Solyc07g053970.2.1	AT4G03560.1	15299147
AT3G21090.1	Solyc06g065380.2.1	AT4G09570.1	19130088
AT3G21090.1	Solyc11g018610.1.1	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400077106	Potato	cytosol, peroxisome, plasma membrane	98.09	98.09
VIT_06s0061g00230.t01	Wine grape	plasma membrane	67.89	74.44
KRH24076	Soybean	cytosol, peroxisome, plasma membrane	70.67	69.35
AT1G51500.1	Thale cress	cytosol, peroxisome, plasma membrane	69.79	69.29
AT3G21090.1	Thale cress	cytosol, peroxisome, plasma membrane	70.09	69.18
KRH29048	Soybean	cytosol, peroxisome, plasma membrane	70.53	68.81
Bra030437.1-P	Field mustard	nucleus, peroxisome, plasma membrane	69.35	68.35
CDY43913	Canola	nucleus, peroxisome, plasma membrane	69.35	68.35
Bra031249.1-P	Field mustard	peroxisome	68.77	67.87
CDX87823	Canola	nucleus, peroxisome, plasma membrane	67.3	67.8
CDY61513	Canola	golgi, mitochondrion, peroxisome, plasma membrane	62.17	67.3
CDY06406	Canola	peroxisome	66.86	67.16
GSMUA_Achr4P00390_001	Banana	plasma membrane	57.62	63.49
Zm00001d010426_P001	Maize	plastid	63.78	63.04
EES19248	Sorghum	cytosol, peroxisome, plasma membrane	63.49	62.94
Solyc11g065360.1.1	Tomato	cytosol, peroxisome, plasma membrane	63.49	62.94
Os05t0222200-01	Rice	nucleus, peroxisome, plasma membrane	63.34	61.71
HORVU1Hr1G030200.1	Barley	nucleus, peroxisome, plasma membrane	62.02	61.39
TraesCS1D01G126600.1	Wheat	nucleus, peroxisome, plasma membrane	61.73	61.1
TraesCS1A01G126900.1	Wheat	nucleus, peroxisome, plasma membrane	61.73	61.1
TraesCS1B01G147700.1	Wheat	nucleus, peroxisome, plasma membrane	61.58	60.96
CDY18337	Canola	plasma membrane	21.55	59.51
Solyc06g072090.1.1	Tomato	cytosol, plasma membrane, plastid	53.08	54.85
Solyc03g019760.2.1	Tomato	nucleus	54.11	51.97
Solyc06g072100.1.1	Tomato	cytosol, peroxisome, plasma membrane	52.93	50.49
Solyc01g105400.2.1	Tomato	cytosol, plastid	8.5	49.57
Solyc01g105450.2.1	Tomato	plasma membrane	43.7	47.53
Solyc05g051530.2.1	Tomato	cytosol, peroxisome, plasma membrane	36.07	46.42
GSMUA_Achr4P00380_001	Banana	plastid	55.57	45.72
Solyc11g009100.1.1	Tomato	cytosol, peroxisome, plasma membrane	42.67	44.84
Solyc06g074970.1.1	Tomato	plastid	28.01	31.73
Solyc11g069710.1.1	Tomato	plastid	33.43	31.54
Solyc04g025170.2.1	Tomato	mitochondrion	23.17	15.49
Solyc11g069820.1.1	Tomato	plasma membrane	24.05	15.0
Solyc06g075020.2.1	Tomato	plasma membrane	23.75	14.81
Solyc09g008000.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	22.87	14.3

Protein Annotations

MapMan:21.9.4.2	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	UniProt:K4D9E8	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF338	SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc11g065350.1
EnsemblPlants:Solyc11g065350.1.1	TMHMM:TMhelix	UniParc:UPI000276996C	SEG:seg	:	:

Description

No Description!

Coordinates

chr11:+:50785240..50791629

Molecular Weight (calculated)

76166.4 Da

IEP (calculated)

9.778

GRAVY (calculated)

0.123

Length

682 amino acids

Sequence
(BLAST)

001: MEIEVTSSSN DIEKGVMHSQ GVAYLVWEDL TVMLPNFGQG PTKKLLHGLS GYAEPGRIMA IMGPSGSGKS TLLDTLAGRL STNVVMTGNI LLNGKKRRLD
101: YGVVAYVTQE DTLLGTLTPR ETITYSAHLR LPTRMTKEEV DDIVEGTIME MGLGDCADRL VGNWQLRGIS GGEKKRLSIA LEILVRPRIL FLDEPTTGLD
201: SASAFFVVQA LKNISRDGRT VISSIHQPSS EVFALFDDLF LLSGGEAVYF GEAKLAVQFF AESGFPCPSR RNPSDHFLRC VNSDFDVVTA TLKGSQRLRE
301: THKSDYLMNM ATAEIKEMLA SKYKHSPYAT RARSRMRELL ATQGVEIEIV KGSQAGWGKQ LLTLTRRSFV NMSRDKGYYW SRIVIYIIVA FAVGTLFYDV
401: GTSYTAILAR GACGGFVTGY MTFMSIGGFP SFIEEMKVFT KERLNGHYGV AAFVLANFLS SFPFLVAVSL LTGTITYYMV FRARFFRYVF FCLNLFGCIA
501: VVESCMMIVA SLVPNFLMGI ITGAGVLGIM MMTAGFFRLL PDLPKPIWRY PISFIGYGAW GLQGSYKNDM IGLVFDPLIP GGEKLKGEDV ITNMFKLSLD
601: HSKWWDLLAL YSLIVMYRVL FFIILKLKER ATPFFRSMYA KRTMHQLKRR PSFKRKPSLS YSKRQHALRS LSSQEGLSSP IP

Best Arabidopsis Sequence Match ( AT3G21090.1 )
(BLAST)

001: MELEGSSSGR RQLPSKLEMS RGAYLAWEDL TVVIPNFSDG PTRRLLQRLN GYAEPGRIMA IMGPSGSGKS TLLDSLAGRL ARNVVMTGNL LLNGKKARLD
101: YGLVAYVTQE DVLLGTLTVR ETITYSAHLR LPSDMSKEEV SDIVEGTIME LGLQDCSDRV IGNWHARGVS GGERKRVSIA LEILTRPQIL FLDEPTSGLD
201: SASAFFVIQA LRNIARDGRT VISSVHQPSS EVFALFDDLF LLSSGESVYF GEAKSAVEFF AESGFPCPKK RNPSDHFLRC INSDFDTVTA TLKGSQRIQE
301: TPATSDPLMN LATSVIKARL VENYKRSKYA KSAKSRIREL SNIEGLEMEI RKGSEATWWK QLRTLTARSF INMCRDVGYY WTRIISYIVV SISVGTIFYD
401: VGYSYTSILA RVSCGGFITG FMTFMSIGGF PSFLEEMKVF YKERLSGYYG VSVYILSNYI SSFPFLVAIS VITGTITYNL VKFRPGFSHY AFFCLNIFFS
501: VSVIESLMMV VASVVPNFLM GLITGAGLIG IIMMTSGFFR LLPDLPKIFW RYPVSYISYG SWAIQGGYKN DFLGLEFEPL FPGEPKMTGE EVIEKVFGVK
601: VTYSKWWDLA AVVAILVCYR LLFFVVLKLR ERAGPALKAI QAKRTMRNLD RRPSFKRMPS LSLSLSSMSS RRHQPLRSLS SQEGLNSPIH Y

Arabidopsis Description

ABCG15ABC transporter G family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWI9]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.