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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
MultiLoc:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018911.1-P Field mustard plastid 99.05 99.05
CDY49810 Canola plasma membrane 97.3 97.3
AT1G51460.1 Thale cress plasma membrane 88.1 81.86
VIT_06s0061g00260.t01 Wine grape cytosol 65.56 60.56
KRH24072 Soybean cytosol, peroxisome, plasma membrane 63.49 58.14
GSMUA_Achr4P00390_001 Banana plasma membrane 56.98 58.0
KRH29043 Soybean cytosol, peroxisome, plasma membrane 63.49 57.8
CDY61513 Canola golgi, mitochondrion, peroxisome, plasma membrane 57.46 57.46
Solyc11g065360.1.1 Tomato cytosol, peroxisome, plasma membrane 59.68 54.65
CDX87823 Canola nucleus, peroxisome, plasma membrane 57.78 53.77
CDY06406 Canola peroxisome 57.94 53.76
CDY43913 Canola nucleus, peroxisome, plasma membrane 58.89 53.61
EES19248 Sorghum cytosol, peroxisome, plasma membrane 58.1 53.2
Zm00001d010426_P001 Maize plastid 58.25 53.19
HORVU1Hr1G030200.1 Barley nucleus, peroxisome, plasma membrane 56.98 52.1
TraesCS1B01G147700.1 Wheat nucleus, peroxisome, plasma membrane 56.83 51.96
TraesCS1A01G126900.1 Wheat nucleus, peroxisome, plasma membrane 56.83 51.96
TraesCS1D01G126600.1 Wheat nucleus, peroxisome, plasma membrane 56.83 51.96
Os05t0222200-01 Rice nucleus, peroxisome, plasma membrane 57.62 51.86
CDY18337 Canola plasma membrane 18.57 47.37
CDY26211 Canola cytosol, peroxisome, plasma membrane 46.98 43.79
CDY19179 Canola cytosol, peroxisome, plasma membrane 46.98 43.79
CDX96749 Canola cytosol, peroxisome, plasma membrane 46.67 43.43
CDX83888 Canola cytosol, peroxisome, plasma membrane 46.67 43.3
GSMUA_Achr4P00380_001 Banana plastid 56.19 42.7
CDY30512 Canola cytosol 18.1 27.6
CDX77150 Canola plastid 31.11 26.85
CDX71393 Canola plastid 32.22 25.44
CDY04533 Canola mitochondrion 32.06 24.75
CDX71030 Canola plasma membrane 22.22 14.66
CDY25855 Canola plasma membrane 22.86 13.89
CDY24098 Canola plasma membrane 22.7 13.43
CDY51880 Canola plasma membrane 22.38 13.38
CDY62072 Canola endoplasmic reticulum, golgi, plasma membrane 22.38 13.24
CDY11955 Canola plasma membrane 22.7 13.14
CDY36779 Canola plasma membrane 21.9 12.91
CDY62076 Canola plasma membrane 22.22 12.89
CDY24100 Canola plasma membrane 22.06 12.8
CDX91328 Canola plasma membrane 20.79 12.12
CDX74994 Canola plasma membrane 20.79 12.12
CDY70653 Canola extracellular, golgi, vacuole 0.0 0.0
Protein Annotations
MapMan:21.9.4.2MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078GBX0UniProt:A0A078GBX0InterPro:AAA+_ATPase
InterPro:ABC_2_transInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY22844ProteinID:CDY22844ProteinID:CDY22844.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00021192001InterPro:IPR003439
InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241
PANTHER:PTHR19241:SF186SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EDBFF2:
Description
BnaA06g02330DBnaA06g02330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBX0]
Coordinates
chrLK032136:-:441409..445950
Molecular Weight (calculated)
70220.9 Da
IEP (calculated)
9.576
GRAVY (calculated)
0.172
Length
630 amino acids
Sequence
(BLAST)
001: MGPSGSGKST LLDALAGRLA GNVVMSGKVL VNGKKRRLDF GTSAYVTQED VLLGTLTVRE SIAYSAHLRL PSKLSRKQIT DIVEATITDM GLQECSDRTI
101: GNWHMRGISG GEKKRLSIAL EVLTKPCLLF LDEPTSGLDS ASAFFVIQIL RNIASNGKTV ISSIHQPSGE VFALFDDLLL LSGGETVYFG EAKFATKFFG
201: EAGFPCPSRR NPSDHFLRCV NSDFDGITAT VVESRRIHDS SFSLYRETSN TLDPFDNMPT AEIRTTLVRK FKCSEYAVAS RARIQEITSI KGLVTERNNA
301: SQTSWWKQLR VLTQRSFINM SRDLGYYWIR IGVYILLSIC VGSVFFNVGR NHTNVMNTAA CGGFMAGFMT IMSIGGFQSF IEEMKVFSRE RLNGHYGVAV
401: YTVSNFLSSL PFIILMCLGT TSITNYMVKF QPSASHFFYS CLDLISAIAT VESCMMMIAS MVPNFLMGVI IGAGYIGVMI LSAGFFRLFP DLPMVFWRYP
501: VSYINYGAWA LQGAFKNEMI GVEYNSPLPL VPKMKGELIL ETVLGINPAQ SKWLDLGVVL MILVAYRLLF FAILKFREKV FPLIHMLYTK RTLSHIQKRP
601: SFRRMSPFPS LRHNVHHALS SQEGLNSPLH
Best Arabidopsis Sequence Match ( AT1G51460.1 )
(BLAST)
001: MTTPEGAMYV AWEDLTVVIP NFGEGATKRL LNGVNGCGEP NRILAIMGPS GSGKSTLLDA LAGRLAGNVV MSGKVLVNGK KRRLDFGAAA YVTQEDVLLG
101: TLTVRESISY SAHLRLPSKL TREEISDIVE ATITDMGLEE CSDRTIGNWH LRGISGGEKK RLSIALEVLT KPSLLFLDEP TSGLDSASAF FVVQILRNIA
201: SSGKTVVSSI HQPSGEVFAL FDDLLLLSGG ETVYFGEAES ATKFFGEAGF PCPSRRNPSD HFLRCVNSDF DNVTAALVES RRINDSSFSL HQLHETTNTL
301: DPLDDIPTAE IRTTLVRKFK CSLYAAASRA RIQEIASIVG IVTERKKGSQ TNWWKQLRIL TQRSFINMSR DLGYYWMRIA VYIVLSICVG SIFFNVGRNH
401: TNVMSTAACG GFMAGFMTFM SIGGFQSFIE EMKVFSRERL NGHYGVAVYT VSNLLSSLPF IILMCLSTSS ITIYMVRFQS GGSHFFYNCL DLICAITTVE
501: SCMMMIASVV PNFLMGVMLG AGYIGIMVLS AGFFRFFPDL PMVFWRYPVS YINYGAWALQ GAYKNEMIGV EYDSPLPLVP KMKGELILQT VLGINPESSK
601: WLDLAVVMMI LIGYRIAFFA ILKFREKVFP VIHMLYTKRT LSHIQKRPSF RRMTPFPSRR YPVHHALSSQ EGLNSPLH
Arabidopsis Description
ABCG13ABC transporter G family member 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8J8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.