Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74994 | Canola | plasma membrane | 98.31 | 32.19 |
| CDX91328 | Canola | plasma membrane | 98.31 | 32.19 |
| CDY25855 | Canola | plasma membrane | 50.85 | 17.36 |
| CDY51880 | Canola | plasma membrane | 51.13 | 17.17 |
| CDY62076 | Canola | plasma membrane | 52.26 | 17.04 |
| CDY24100 | Canola | plasma membrane | 52.26 | 17.04 |
| CDX71030 | Canola | plasma membrane | 45.48 | 16.86 |
| CDY36779 | Canola | plasma membrane | 49.44 | 16.37 |
| CDY24098 | Canola | plasma membrane | 48.59 | 16.15 |
| CDY11955 | Canola | plasma membrane | 49.44 | 16.08 |
| CDY62072 | Canola | endoplasmic reticulum, golgi, plasma membrane | 48.31 | 16.06 |
| CDY30512 | Canola | cytosol | 5.93 | 5.08 |
| CDX71393 | Canola | plastid | 7.06 | 3.13 |
| CDY04533 | Canola | mitochondrion | 7.06 | 3.06 |
| CDX77150 | Canola | plastid | 6.21 | 3.01 |
| CDX83888 | Canola | cytosol, peroxisome, plasma membrane | 2.54 | 1.33 |
| CDY26211 | Canola | cytosol, peroxisome, plasma membrane | 2.26 | 1.18 |
| CDX96749 | Canola | cytosol, peroxisome, plasma membrane | 2.26 | 1.18 |
| CDY19179 | Canola | cytosol, peroxisome, plasma membrane | 1.98 | 1.04 |
| CDX87823 | Canola | nucleus, peroxisome, plasma membrane | 1.13 | 0.59 |
| CDY43913 | Canola | nucleus, peroxisome, plasma membrane | 1.13 | 0.58 |
| CDY06406 | Canola | peroxisome | 0.85 | 0.44 |
| CDY22844 | Canola | plastid | 0.0 | 0.0 |
| CDY18337 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY49810 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY61513 | Canola | golgi, mitochondrion, peroxisome, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY70653 | EnsemblPlantsGene:GSBRNA2T00005103001 | GO:A0A078JSR8 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR19241 | PANTHER:PTHR19241:SF304 | PFscan:PS51257 | ProteinID:CDY70653 | ProteinID:CDY70653.1 | TMHMM:TMhelix |
| UniParc:UPI0004EE8CDF | UniProt:A0A078JSR8 | MapMan:24.1.3.2.2 | : | : | : |
Description
BnaCnng69230DBnaCnng69230D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JSR8]
Coordinates
chrLK042824:-:1..1795
Molecular Weight (calculated)
39436.2 Da
IEP (calculated)
8.315
GRAVY (calculated)
-0.298
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRLRIDVGW LQHILFFFVC GLGFISLASC LDGDDYSKTG NPKVLVPVTN LIYNRLQSLK NVLKADIDRD LGYCIKNLKD DWDEAFDFDK NLDFLSNCIK
101: KTDGDITLRL CSAAEIKFYF SSFIRRDEVT TVHVKPNVNC NLAKWVSGCE PGWSCNADDD KKFDIKNGKV LPSRTRKCQP CCEGFFCPQG LACMIPCPLG
201: AYCPLAKLNK ATGVCEPYNY QIPPGKLNHT CGSADSWADA ESSGDMFCSP GSYCPTTIRK VTCGSGHYCR QGSTSQKPCF KLATCNPNTA NQNIHAYGAI
301: LIASVSLVMI MVYNCSDQVL ATREKRQAKS REAAARHAKE TTQARERWKT ARDV
101: KTDGDITLRL CSAAEIKFYF SSFIRRDEVT TVHVKPNVNC NLAKWVSGCE PGWSCNADDD KKFDIKNGKV LPSRTRKCQP CCEGFFCPQG LACMIPCPLG
201: AYCPLAKLNK ATGVCEPYNY QIPPGKLNHT CGSADSWADA ESSGDMFCSP GSYCPTTIRK VTCGSGHYCR QGSTSQKPCF KLATCNPNTA NQNIHAYGAI
301: LIASVSLVMI MVYNCSDQVL ATREKRQAKS REAAARHAKE TTQARERWKT ARDV
0001: MNFNTSLVIM LLNLKMSVDR RNWLKHGCNL RLVILVLWLV CYVSNGQTIG DTSDFNNPAV LPLVTQMVYR SLSNSTAALN RELGIRAKFC VKDPDADWNR
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK
Arabidopsis Description
ABCG24ABC transporter G family member 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAG3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.