Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24100 | Canola | plasma membrane | 98.53 | 98.53 |
| CDY25855 | Canola | plasma membrane | 84.62 | 88.62 |
| CDY51880 | Canola | plasma membrane | 85.64 | 88.24 |
| CDY62072 | Canola | endoplasmic reticulum, golgi, plasma membrane | 84.9 | 86.57 |
| CDY24098 | Canola | plasma membrane | 83.79 | 85.45 |
| AT1G53390.1 | Thale cress | plasma membrane | 85.08 | 83.32 |
| KRG91932 | Soybean | plasma membrane | 65.65 | 63.95 |
| KRH34842 | Soybean | plasma membrane | 65.19 | 63.44 |
| VIT_13s0019g04600.t01 | Wine grape | plasma membrane | 65.38 | 63.39 |
| KRH71703 | Soybean | plasma membrane | 64.27 | 62.71 |
| OQU76478 | Sorghum | plasma membrane | 21.55 | 61.58 |
| CDX71030 | Canola | plasma membrane | 53.87 | 61.26 |
| Solyc04g025170.2.1 | Tomato | mitochondrion | 56.35 | 60.0 |
| GSMUA_Achr4P12050_001 | Banana | mitochondrion, plasma membrane | 57.55 | 59.35 |
| GSMUA_Achr4P05530_001 | Banana | plasma membrane | 54.79 | 59.2 |
| HORVU6Hr1G091510.2 | Barley | mitochondrion | 56.63 | 58.91 |
| CDY11955 | Canola | plasma membrane | 57.55 | 57.44 |
| GSMUA_Achr8P14250_001 | Banana | plasma membrane | 53.22 | 57.28 |
| CDX74994 | Canola | plasma membrane | 56.81 | 57.08 |
| CDX91328 | Canola | plasma membrane | 56.81 | 57.08 |
| Os06t0731200-01 | Rice | plasma membrane | 52.21 | 56.98 |
| TraesCSU01G106900.1 | Wheat | plasma membrane | 55.52 | 56.83 |
| GSMUA_Achr11P... | Banana | plasma membrane | 52.03 | 56.22 |
| CDY36779 | Canola | plasma membrane | 55.25 | 56.13 |
| TraesCS7B01G488900.1 | Wheat | plasma membrane | 54.79 | 56.08 |
| Os11t0416900-01 | Rice | plasma membrane | 56.35 | 55.59 |
| Zm00001d046068_P001 | Maize | plasma membrane | 53.13 | 55.48 |
| HORVU7Hr1G122580.37 | Barley | endoplasmic reticulum, vacuole | 44.29 | 54.85 |
| KXG31382 | Sorghum | plasma membrane | 55.52 | 54.62 |
| TraesCS6B01G434900.1 | Wheat | plasma membrane | 56.26 | 54.07 |
| Zm00001d018500_P002 | Maize | plasma membrane | 55.06 | 53.78 |
| Os04t0194500-01 | Rice | plasma membrane | 52.03 | 53.05 |
| CDY70653 | Canola | extracellular, golgi, vacuole | 17.04 | 52.26 |
| Zm00001d004335_P001 | Maize | plasma membrane | 51.75 | 51.37 |
| TraesCS6D01G380300.1 | Wheat | plasma membrane | 56.54 | 51.21 |
| KXG25878 | Sorghum | plasma membrane | 51.01 | 50.55 |
| TraesCS2B01G060900.1 | Wheat | plasma membrane | 50.28 | 50.42 |
| TraesCS2A01G049700.2 | Wheat | plasma membrane | 50.09 | 50.37 |
| TraesCS2D01G048800.1 | Wheat | plasma membrane | 50.18 | 50.37 |
| Zm00001d025031_P001 | Maize | plasma membrane | 50.55 | 49.86 |
| TraesCS6A01G395000.2 | Wheat | plasma membrane, plastid | 56.72 | 49.48 |
| CDY30512 | Canola | cytosol | 9.48 | 24.94 |
| CDY26211 | Canola | cytosol, peroxisome, plasma membrane | 14.92 | 23.96 |
| CDX83888 | Canola | cytosol, peroxisome, plasma membrane | 14.82 | 23.71 |
| CDY19179 | Canola | cytosol, peroxisome, plasma membrane | 14.73 | 23.67 |
| CDX87823 | Canola | nucleus, peroxisome, plasma membrane | 14.73 | 23.63 |
| CDX96749 | Canola | cytosol, peroxisome, plasma membrane | 14.55 | 23.34 |
| CDY06406 | Canola | peroxisome | 14.46 | 23.12 |
| CDY43913 | Canola | nucleus, peroxisome, plasma membrane | 14.64 | 22.98 |
| CDY49810 | Canola | plasma membrane | 13.17 | 22.7 |
| CDY22844 | Canola | plastid | 12.89 | 22.22 |
| CDY61513 | Canola | golgi, mitochondrion, peroxisome, plasma membrane | 12.52 | 21.59 |
| CDX77150 | Canola | plastid | 13.63 | 20.27 |
| CDX71393 | Canola | plastid | 14.09 | 19.17 |
| CDY04533 | Canola | mitochondrion | 13.9 | 18.5 |
| CDY18337 | Canola | plasma membrane | 2.3 | 10.12 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | GO:A0A078JCS0 | UniProt:A0A078JCS0 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like |
| InterPro:ABC_transporter_CS | EnsemblPlants:CDY62076 | ProteinID:CDY62076 | ProteinID:CDY62076.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | EnsemblPlantsGene:GSBRNA2T00035921001 | InterPro:IPR003439 | InterPro:P-loop_NTPase | PFAM:PF00005 |
| ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF304 | SMART:SM00382 | SUPFAM:SSF52540 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EE1D5B | SEG:seg | : | : |
Description
BnaC06g41490DBnaC06g41490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCS0]
Coordinates
chrLK034092:-:21157..26900
Molecular Weight (calculated)
120658.0 Da
IEP (calculated)
9.091
GRAVY (calculated)
-0.117
Length
1086 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSVNRLKHGS NLRLVLLVLW LVCYVCYGQF EDTNDFSNPA VLPLVTQMVY RSLSNSTAAL NQELATRAKF CVKDPDADWN KAFNFSTNLD FLSSCIQKTK
0101: GDIGRRMCTA AEMKFYLNAF FSKTNNPGYL QPNGNCNLTS WVSGCEPGWA CSVDPNEQVD LQNSKDFPER TRNCMSCCEG FFCPRGLTCM IPCPLGAHCP
0201: LATLNKTTSL CQPYTYQLPP GQPNHTCGGA NVWADIRSSG EVFCSAGSYC PTTTRKVPCD SGHYCRMGST SEKPCFKLTS CNPNTANQNM HALGVMVICG
0301: VVTILLIIYN CSDQILTTRE RRQAKSREAA VKKAKANQRW KVARTAAKKH VTEIRAQITR TFSGKKPNND GETHKMLARG YSSEVEDLPK YSSSPASSSA
0401: VQPTFEIEDD ATAGSIERPS VTTTGGKRGK GHRMKKSQSQ ILRYAYNQIE KEKAREVENR NLTFSGIVNM ATYSEMKKRT LMELSFKDLT LTLKSNSKHL
0501: LRCVTGSMKP GRITAVMGPS GAGKTSLLSA LAGKAVGCKL SGLILINGKE LSIHSYKKII GFVPQDDIVH GNLTVEENIW FHAKCRLPAG QSKADKVLVV
0601: ERVIDSLGLQ AVRSSLVGTV EKRGISGGQR KRVNVGLEMA MEPSILFLDE PTSGLDSASS QLLLKALKHE ALEGVNICMV VHQPSYSLFQ TFNDLVLLAK
0701: GGLTVYHGPV KDVETYFSGL GIIVPERINP PDYYIDVLEG IVTNLNSDVS YKELPQRWML HKGYSVPLDM RNNNNSDAGL EMNPDVRDST SNAEQTFVRE
0801: LWGDVKSNFR LRRDKIRHNF LKTRDLSYRT TPSMWLQYKY FLGRIAKQRM REAKLQATDY LILLLAGACL GSLIKASDES FGAPGYTYTI IAVSLLCKIA
0901: ALRSFSLDKL HYWRESAAGM SSLASFLAKD TMDCFNTLVK PLVYLSMFYF FTNPRSTFFD NYIVLVCLVY CVTGIAYALA IFLQPGSAQL FSVLLPVVLT
1001: LVATQPKDSE AMKIIADLCY PKWALQAFVI GNAQKYYGVW MITRCGSLMK SGYDINEWNL CIMILLLIGV VTRMIAFVGM IILQKR
0101: GDIGRRMCTA AEMKFYLNAF FSKTNNPGYL QPNGNCNLTS WVSGCEPGWA CSVDPNEQVD LQNSKDFPER TRNCMSCCEG FFCPRGLTCM IPCPLGAHCP
0201: LATLNKTTSL CQPYTYQLPP GQPNHTCGGA NVWADIRSSG EVFCSAGSYC PTTTRKVPCD SGHYCRMGST SEKPCFKLTS CNPNTANQNM HALGVMVICG
0301: VVTILLIIYN CSDQILTTRE RRQAKSREAA VKKAKANQRW KVARTAAKKH VTEIRAQITR TFSGKKPNND GETHKMLARG YSSEVEDLPK YSSSPASSSA
0401: VQPTFEIEDD ATAGSIERPS VTTTGGKRGK GHRMKKSQSQ ILRYAYNQIE KEKAREVENR NLTFSGIVNM ATYSEMKKRT LMELSFKDLT LTLKSNSKHL
0501: LRCVTGSMKP GRITAVMGPS GAGKTSLLSA LAGKAVGCKL SGLILINGKE LSIHSYKKII GFVPQDDIVH GNLTVEENIW FHAKCRLPAG QSKADKVLVV
0601: ERVIDSLGLQ AVRSSLVGTV EKRGISGGQR KRVNVGLEMA MEPSILFLDE PTSGLDSASS QLLLKALKHE ALEGVNICMV VHQPSYSLFQ TFNDLVLLAK
0701: GGLTVYHGPV KDVETYFSGL GIIVPERINP PDYYIDVLEG IVTNLNSDVS YKELPQRWML HKGYSVPLDM RNNNNSDAGL EMNPDVRDST SNAEQTFVRE
0801: LWGDVKSNFR LRRDKIRHNF LKTRDLSYRT TPSMWLQYKY FLGRIAKQRM REAKLQATDY LILLLAGACL GSLIKASDES FGAPGYTYTI IAVSLLCKIA
0901: ALRSFSLDKL HYWRESAAGM SSLASFLAKD TMDCFNTLVK PLVYLSMFYF FTNPRSTFFD NYIVLVCLVY CVTGIAYALA IFLQPGSAQL FSVLLPVVLT
1001: LVATQPKDSE AMKIIADLCY PKWALQAFVI GNAQKYYGVW MITRCGSLMK SGYDINEWNL CIMILLLIGV VTRMIAFVGM IILQKR
0001: MNFNTSLVIM LLNLKMSVDR RNWLKHGCNL RLVILVLWLV CYVSNGQTIG DTSDFNNPAV LPLVTQMVYR SLSNSTAALN RELGIRAKFC VKDPDADWNR
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK
Arabidopsis Description
ABCG24ABC transporter G family member 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAG3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.