CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046068_P001	Maize	plasma membrane	96.58	35.29
HORVU7Hr1G122580.37	Barley	endoplasmic reticulum, vacuole	76.84	33.3
TraesCSU01G106900.1	Wheat	plasma membrane	84.47	30.25
TraesCS7B01G488900.1	Wheat	plasma membrane	84.21	30.16
GSMUA_Achr4P05530_001	Banana	plasma membrane	78.68	29.75
KXG31382	Sorghum	plasma membrane	84.21	28.99
GSMUA_Achr4P12050_001	Banana	mitochondrion, plasma membrane	76.84	27.73
Os06t0731200-01	Rice	plasma membrane	71.58	27.34
CDY25855	Canola	plasma membrane	62.11	22.76
CDY51880	Canola	plasma membrane	62.63	22.58
OQU91719	Sorghum	plasma membrane	55.0	22.47
VIT_13s0019g04600.t01	Wine grape	plasma membrane	66.05	22.41
Bra038121.1-P	Field mustard	plasma membrane	62.11	22.39
Solyc04g025170.2.1	Tomato	mitochondrion	60.0	22.35
KRG91932	Soybean	plasma membrane	65.26	22.24
KRH34842	Soybean	plasma membrane	65.26	22.22
KRH71703	Soybean	plasma membrane	63.68	21.74
Bra039668.1-P	Field mustard	plasma membrane	61.58	21.55
CDY62076	Canola	plasma membrane	61.58	21.55
CDY24100	Canola	plasma membrane	61.58	21.55
CDY62072	Canola	endoplasmic reticulum, golgi, plasma membrane	60.26	21.5
CDY24098	Canola	plasma membrane	60.0	21.41
KXG25878	Sorghum	plasma membrane	61.05	21.17
AT1G53390.1	Thale cress	plasma membrane	61.58	21.1
Bra039669.1-P	Field mustard	cytosol, peroxisome, plasma membrane	60.26	20.25
KXG35822	Sorghum	mitochondrion, nucleus, peroxisome, plasma membrane	19.47	10.08
KXG38261	Sorghum	cytosol, peroxisome, plasma membrane	18.42	9.8
KXG19944	Sorghum	plastid	18.16	9.48
OQU82009	Sorghum	mitochondrion	18.95	9.23
EES19248	Sorghum	cytosol, peroxisome, plasma membrane	16.58	9.16
OQU84078	Sorghum	cytosol, plasma membrane	13.42	8.87
KXG34927	Sorghum	plastid	15.53	8.44
EER90467	Sorghum	cytosol, plasma membrane, plastid	13.42	7.06

Protein Annotations

EnsemblPlants:OQU76478	EnsemblPlantsGene:SORBI_3010G151575	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR19241
PANTHER:PTHR19241:SF448	ProteinID:OQU76478	ProteinID:OQU76478.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0009DC9045
UniProt:A0A1W0VT68	MapMan:24.1.3.2.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:44006475..44012234

Molecular Weight (calculated)

42795.8 Da

IEP (calculated)

8.425

GRAVY (calculated)

0.083

Length

380 amino acids

Sequence
(BLAST)

001: MTVYHGPVKK VEEYFSGLGI VVPDRVNPPD YYIDILEGIV KPDTKESVNV KDLPIRWMLH NGYEVPRDML QSSSDSESSF RGGGDHAKGG DAGQSIAGEV
101: WGNVRDIVGQ KKDEYDYNKT SENLSNRRTP GILRQYKYYL GRCGKQRLRE ARIQGVDYLI LGLAGICLGT LAKVSDETFG ALGYTYTVIA VSLLCKIGAL
201: RSFSLEKIHY WRERASGMSS LAYFLSKDTI DHFNTIIKPI VYLSMFYFFN NPRSSIWENY VVLLALVYCV TGIGYTFAIF FQPSSAQLWS ALLPVVLTLI
301: ATQQKDTFFA NLCYTKWALE AFVIANAQKY SGVWLITRCG SLLNSGYDIN DRILCLVVLV ANGVIFRCVA FFCMVIFQKH

Best Arabidopsis Sequence Match ( AT1G53390.1 )
(BLAST)

0001: MNFNTSLVIM LLNLKMSVDR RNWLKHGCNL RLVILVLWLV CYVSNGQTIG DTSDFNNPAV LPLVTQMVYR SLSNSTAALN RELGIRAKFC VKDPDADWNR
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK

Arabidopsis Description

ABCG24ABC transporter G family member 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAG3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.