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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra038121.1-P Field mustard plasma membrane 99.71 98.1
CDY51880 Canola plasma membrane 98.07 96.49
CDY24100 Canola plasma membrane 88.81 84.81
CDY62076 Canola plasma membrane 88.62 84.62
AT1G53390.1 Thale cress plasma membrane 84.76 79.26
CDY62072 Canola endoplasmic reticulum, golgi, plasma membrane 81.39 79.25
CDY24098 Canola plasma membrane 80.71 78.59
OQU76478 Sorghum plasma membrane 22.76 62.11
KRG91932 Soybean plasma membrane 66.25 61.61
VIT_13s0019g04600.t01 Wine grape plasma membrane 66.54 61.61
KRH34842 Soybean plasma membrane 65.67 61.02
CDX71030 Canola plasma membrane 55.83 60.63
KRH71703 Soybean plasma membrane 64.9 60.47
GSMUA_Achr4P12050_001 Banana mitochondrion, plasma membrane 59.88 58.97
Solyc04g025170.2.1 Tomato mitochondrion 57.47 58.43
GSMUA_Achr4P05530_001 Banana plasma membrane 56.51 58.31
HORVU6Hr1G091510.2 Barley mitochondrion 57.57 57.18
GSMUA_Achr8P14250_001 Banana plasma membrane 55.45 56.99
CDY11955 Canola plasma membrane 58.53 55.79
Os06t0731200-01 Rice plasma membrane 53.23 55.48
TraesCSU01G106900.1 Wheat plasma membrane 56.51 55.23
GSMUA_Achr11P... Banana plasma membrane 53.42 55.12
Os11t0416900-01 Rice plasma membrane 58.24 54.86
CDX91328 Canola plasma membrane 57.18 54.86
CDX74994 Canola plasma membrane 57.18 54.86
TraesCS7B01G488900.1 Wheat plasma membrane 56.12 54.85
CDY36779 Canola plasma membrane 56.51 54.82
Zm00001d046068_P001 Maize plasma membrane 54.39 54.23
KXG31382 Sorghum plasma membrane 57.18 53.71
Zm00001d018500_P002 Maize plasma membrane 56.99 53.15
HORVU7Hr1G122580.37 Barley endoplasmic reticulum, vacuole 44.94 53.14
TraesCS6B01G434900.1 Wheat plasma membrane 57.57 52.83
Os04t0194500-01 Rice plasma membrane 53.04 51.64
CDY70653 Canola extracellular, golgi, vacuole 17.36 50.85
Zm00001d004335_P001 Maize plasma membrane 52.84 50.09
TraesCS6D01G380300.1 Wheat plasma membrane 57.76 49.96
KXG25878 Sorghum plasma membrane 52.56 49.73
TraesCS2A01G049700.2 Wheat plasma membrane 51.78 49.72
TraesCS2B01G060900.1 Wheat plasma membrane 51.78 49.58
TraesCS2D01G048800.1 Wheat plasma membrane 51.69 49.54
Zm00001d025031_P001 Maize plasma membrane 51.98 48.96
TraesCS6A01G395000.2 Wheat plasma membrane, plastid 57.96 48.27
CDY30512 Canola cytosol 9.64 24.21
CDX87823 Canola nucleus, peroxisome, plasma membrane 15.62 23.93
CDY26211 Canola cytosol, peroxisome, plasma membrane 15.53 23.82
CDY19179 Canola cytosol, peroxisome, plasma membrane 15.33 23.52
CDY06406 Canola peroxisome 15.33 23.42
CDY49810 Canola plasma membrane 14.18 23.33
CDX83888 Canola cytosol, peroxisome, plasma membrane 15.24 23.27
CDY43913 Canola nucleus, peroxisome, plasma membrane 15.53 23.27
CDX96749 Canola cytosol, peroxisome, plasma membrane 15.04 23.04
CDY22844 Canola plastid 13.89 22.86
CDY61513 Canola golgi, mitochondrion, peroxisome, plasma membrane 13.5 22.22
CDX77150 Canola plastid 13.89 19.73
CDX71393 Canola plastid 14.85 19.3
CDY04533 Canola mitochondrion 14.46 18.38
CDY18337 Canola plasma membrane 2.7 11.34
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078GHA9UniProt:A0A078GHA9InterPro:AAA+_ATPaseInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSEnsemblPlants:CDY25855ProteinID:CDY25855ProteinID:CDY25855.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00033294001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF304SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0004EE65FBSEG:seg:::
Description
BnaA05g14460DBnaA05g14460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHA9]
Coordinates
chrLK032181:-:247286..252083
Molecular Weight (calculated)
115418.0 Da
IEP (calculated)
8.778
GRAVY (calculated)
-0.027
Length
1037 amino acids
Sequence
(BLAST)
0001: MSVNRPYLLK NAANLRLVIL VLWLVCYVGY GQFEDTHDFN NPAALPLFTQ MVYRKLCNST ASLSHELATR AKFCVKDPDA DWNRAFNFST NLDFLSSCIK
0101: KTQGDIGRRI CTAAEMKFYL NAFFFKSSNP GYLQQNGNCN LTSWVSGCEP GWACSIDPTE QVVLQNSTDF PERTRNCMSC CEGFFCPRGL TCMIPCPLGA
0201: HCPLATLNKR TSLCEPYTYQ LPPGRPNHTC GGANVWADIR SSGEVFCSAG SYCPSTTRKL ACDSGNYCRM GSTSEKPCFK LTSCNPNTAN QNMHAFGVMV
0301: IFGVITILLI IYNCSDQILT TREKRQAKSR EAAVKKAKAH QRWKVARTEI RAQITRTFSG ISKYSSPESS SAVQSSNEVK DDKIKKSSSQ ILKDAYSQIE
0401: KEKAMELENK DLTFSGLVNM ATYSEVRKRR TLMELSFKNL TLTLKSNGKH LLRCVTGTMK PSRITAVMGP SGAGKTSLLS ALAGKAVGCS LSGLILINGK
0501: QESIHSYTKI IGFVPQDDIV HGNLTVEENI WFHAKCRLPA GQSKGDKVLV VERVIDSLGL QAVRSCLVGT VEKRGISGGQ RKRVNVGLEM VMEPSILFLD
0601: EPTSGLDSAS SQLLLKALRH EALEGVNVCM VVHQPSYTLF RMFQDLVLLA KGGLTVYHGP VKEVEEYFSG LGIIVPERIN PPDYYIDVLE GIVTDLNSDV
0701: GYKELPQRWM IHKGYSVPLD MQNNNSAKDL VMNPDVVSNT SCNAEQTFVR ELWGDVNSNF RMHSDKIRHN FLQSRDLSCR RNPSIWPQYK YFLGRIAKQR
0801: MREAKLQATD YLILLLAGAC LGSLIKASDE SFGAPGYTYT IIAVSLLCKI AALRSFSLDK LHYWRESASG MSSLACFLAK DTIDCFNTLV KPLVYLSIFY
0901: FFTNPRSTFF DNYIVLVCLV YCVTGIAYAL AIFLQPGSAQ LVSVLLPVVL TLVATQPKNS EAMKIIADLC YPKWALEAFV IGNAEKYYGV WMITRCGSLM
1001: KSGYDINKWN LCIMILLLIG VVTRNIAFVG MLILQKR
Best Arabidopsis Sequence Match ( AT1G53390.1 )
(BLAST)
0001: MNFNTSLVIM LLNLKMSVDR RNWLKHGCNL RLVILVLWLV CYVSNGQTIG DTSDFNNPAV LPLVTQMVYR SLSNSTAALN RELGIRAKFC VKDPDADWNR
0101: AFNFSSNLNF LSSCIKKTQG SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL QNSKDFPERR RNCMPCCEGF
0201: FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC
0301: NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD
0401: SSEIDEAIDM STCSSPASSS AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ ENKNLTFSGI VKMATNSETR
0501: KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE
0601: NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI
0701: CMVVHQPSYT LFKTFNDLVL LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ RWMLHKGYSV PLDMRNNSAA
0801: GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS
0901: DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY
1001: ALAIFLQPST AQLFSVLLPV VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK WSLCIMILLL VGLTTRGVAF
1101: VGMLILQKK
Arabidopsis Description
ABCG24ABC transporter G family member 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAG3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.