CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96749	Canola	cytosol, peroxisome, plasma membrane	98.53	98.82
CDY26211	Canola	cytosol, peroxisome, plasma membrane	95.29	95.71
CDY19179	Canola	cytosol, peroxisome, plasma membrane	95.29	95.71
AT1G17840.1	Thale cress	cytosol, peroxisome, plasma membrane	95.73	92.46
VIT_16s0039g00010.t01	Wine grape	cytosol, peroxisome, plasma membrane	82.77	79.72
KRH38814	Soybean	cytosol, peroxisome, plasma membrane	81.3	78.08
KRH09311	Soybean	cytosol, peroxisome, plasma membrane	81.15	78.05
GSMUA_Achr5P19820_001	Banana	cytosol, peroxisome, plasma membrane	74.08	75.41
PGSC0003DMT400039496	Potato	cytosol, peroxisome, plasma membrane	78.35	75.25
Solyc03g019760.2.1	Tomato	nucleus	78.5	75.07
GSMUA_Achr5P10800_001	Banana	cytosol, peroxisome, plasma membrane	76.29	74.75
TraesCS1B01G181300.2	Wheat	cytosol, peroxisome, plasma membrane	74.96	71.09
TraesCS1D01G161500.2	Wheat	cytosol, peroxisome, plasma membrane	74.67	70.81
Os10t0494300-01	Rice	extracellular, plasma membrane	75.26	70.68
Os04t0528300-01	Rice	plasma membrane	73.49	70.18
Zm00001d002871_P001	Maize	cytosol, peroxisome, plasma membrane	74.52	70.18
KXG38261	Sorghum	cytosol, peroxisome, plasma membrane	73.78	70.17
TraesCSU01G020100.1	Wheat	plasma membrane	73.49	69.69
Zm00001d013960_P001	Maize	cytosol, peroxisome, plasma membrane	72.75	69.58
TraesCS2A01G374100.1	Wheat	plasma membrane	73.34	69.36
Zm00001d032601_P002	Maize	cytosol, peroxisome, plasma membrane	72.02	66.44
HORVU2Hr1G090960.2	Barley	cytosol	72.9	65.48
TraesCS1A01G164500.1	Wheat	cytosol	65.24	64.58
OQU82009	Sorghum	mitochondrion	74.08	64.49
TraesCS2D01G370400.2	Wheat	plastid	73.34	64.18
TraesCS1D01G150800.1	Wheat	cytosol, peroxisome, plasma membrane	64.21	60.56
CDY43913	Canola	nucleus, peroxisome, plasma membrane	50.66	49.71
CDX87823	Canola	nucleus, peroxisome, plasma membrane	49.34	49.48
CDY61513	Canola	golgi, mitochondrion, peroxisome, plasma membrane	45.51	49.05
CDY06406	Canola	peroxisome	49.04	49.04
CDY49810	Canola	plasma membrane	43.3	46.67
CDY22844	Canola	plastid	43.3	46.67
CDY18337	Canola	plasma membrane	14.14	38.87
CDX77150	Canola	plastid	32.7	30.41
CDY30512	Canola	cytosol	17.67	29.06
CDX71393	Canola	plastid	33.14	28.2
CDY04533	Canola	mitochondrion	33.43	27.82
CDX71030	Canola	plasma membrane	22.53	16.02
CDY24098	Canola	plasma membrane	24.3	15.49
CDY62072	Canola	endoplasmic reticulum, golgi, plasma membrane	24.15	15.4
CDY25855	Canola	plasma membrane	23.27	15.24
CDY51880	Canola	plasma membrane	23.12	14.9
CDY62076	Canola	plasma membrane	23.71	14.82
CDY24100	Canola	plasma membrane	23.56	14.73
CDX91328	Canola	plasma membrane	23.27	14.62
CDX74994	Canola	plasma membrane	23.27	14.62
CDY11955	Canola	plasma membrane	23.12	14.43
CDY36779	Canola	plasma membrane	22.53	14.31
CDY70653	Canola	extracellular, golgi, vacuole	1.33	2.54

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078D961	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EnsemblPlants:CDX83888	ProteinID:CDX83888	ProteinID:CDX83888.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016787
GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00139661001	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF271	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0004EED71D	SEG:seg	:	:	:

Description

BnaC08g17570D

Coordinates

chrLK031834:-:990532..993937

Molecular Weight (calculated)

75755.9 Da

IEP (calculated)

9.286

GRAVY (calculated)

0.126

Length

679 amino acids

Sequence
(BLAST)

001: MEIEASRQQS TVPVPATGGN FPVPVGGLSP LSEAIWREKA PTEFVGDVSA RLTWQDLTVM VTMGDGETQN VLEGLTGYAE PGSLTALMGP SGSGKSTMLD
101: ALASRLAANA FLSGTVLLNG HKTKLSFGAA AYVTQDDNLI GTLTVRETIW YSARVRLPDK MLRSEKRALV ERTIIEMGLQ DCADTVIGNW HLRGISGGEK
201: RRVSIALEIL MRPRLLFLDE PTSGLDSASA FFVTQTLRAL SRDGRTVIAS IHQPSSEFFA QAGFPCPALR NPSDHFLRCV NSDFDKVRAT LKGSMKLRFE
301: ASDDPLEKIT TTEAIRVLVD YYHTSDYYYT TKAKVEEISQ YKGNILDSGG SQASFLLQTY TLTKRSFINM SRDFGYYWLR LLIYILVTFC IGTIYWKVGT
401: SYSAILARGS CASFVFGFVT FMSIGGFPSF VEDMKVFQRE RLNGHYGVAS FVIANTLAAT PFLIIITFIS GTICYFMVGL HPGFTHYLFF VLCLYASVTV
501: VESLMMAIAS IVPNFLMGII IGAGIQGIFM LVSGFFRLPN DIPKLFWRYP MSYISFHFWA LQGQYQNDLR GLMFDSQGSA FKIPGEYVLE NVFQINLHRS
601: KWINLSVILS MIIIYRIIFF IMIKTNEDVT PWVRGYVARR RMKQKNGTQN TTVAPDGLTQ SPSLRNYVAT RTNGGARRW

Best Arabidopsis Sequence Match ( AT1G17840.1 )
(BLAST)

001: MEIEASRQQT TVPVSVGGGN FPVGGLSPLS EAIWREKAPT EFVGDVSARL TWQDLTVMVT MGDGETQNVL EGLTGYAEPG SLTALMGPSG SGKSTMLDAL
101: ASRLAANAFL SGTVLLNGRK TKLSFGTAAY VTQDDNLIGT LTVRETIWYS ARVRLPDKML RSEKRALVER TIIEMGLQDC ADTVIGNWHL RGISGGEKRR
201: VSIALEILMR PRLLFLDEPT SGLDSASAFF VTQTLRALSR DGRTVIASIH QPSSEVFELF DRLYLLSGGK TVYFGQASDA YEFFAQAGFP CPALRNPSDH
301: FLRCINSDFD KVRATLKGSM KLRFEASDDP LEKITTAEAI RLLVDYYHTS DYYYTAKAKV EEISQFKGTI LDSGGSQASF LLQTYTLTKR SFINMSRDFG
401: YYWLRLLIYI LVTVCIGTIY LNVGTSYSAI LARGSCASFV FGFVTFMSIG GFPSFVEDMK VFQRERLNGH YGVAAFVIAN TLSATPFLIM ITFISGTICY
501: FMVGLHPGFT HYLFFVLCLY ASVTVVESLM MAIASIVPNF LMGIIIGAGI QGIFMLVSGF FRLPNDIPKP FWRYPMSYIS FHFWALQGQY QNDLRGLTFD
601: SQGSAFKIPG EYVLENVFQI DLHRSKWINL SVILSMIIIY RIIFFIMIKT NEDVTPWVRG YIARRRMKQK NGTQNTTVAP DGLTQSPSLR NYIATRTDGA
701: RRW

Arabidopsis Description

ABCG11ABC transporter G family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.