Factsheet for Bra038217.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plasma membrane, vacuole

Predictor Summary:

nucleus 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42190	Canola	golgi, plasma membrane, vacuole	99.16	99.16
CDY69762	Canola	golgi, plasma membrane, vacuole	98.33	98.33
Bra022433.1-P	Field mustard	plasma membrane	93.51	93.32
AT3G19553.1	Thale cress	plasma membrane	92.68	92.48
VIT_03s0091g00600.t01	Wine grape	plasma membrane	77.82	73.81
KRH77938	Soybean	plasma membrane	72.38	71.64
PGSC0003DMT400013939	Potato	plasma membrane	72.38	69.76
Solyc10g049640.1.1	Tomato	plasma membrane	70.29	68.57
GSMUA_Achr2P13450_001	Banana	plasma membrane	51.26	66.22
GSMUA_Achr4P28240_001	Banana	plasma membrane	54.39	63.26
TraesCS5D01G085800.1	Wheat	golgi, plasma membrane, vacuole	58.79	58.06
EES16229	Sorghum	plasma membrane	59.62	58.04
TraesCS5B01G079100.1	Wheat	golgi, plasma membrane, vacuole	58.79	57.94
TraesCS5A01G073000.1	Wheat	golgi, plasma membrane, vacuole	58.79	57.94
Zm00001d030832_P001	Maize	plasma membrane	59.83	57.55
Os12t0580400-01	Rice	plasma membrane	58.16	56.05
Bra023209.1-P	Field mustard	plasma membrane	51.67	54.65
Bra023210.1-P	Field mustard	golgi, peroxisome, plasma membrane, plastid	56.49	54.22
Bra009122.1-P	Field mustard	plasma membrane	53.35	51.93
HORVU5Hr1G019110.1	Barley	plastid	59.0	50.9
Bra027411.1-P	Field mustard	plasma membrane	46.86	46.96
Bra001514.1-P	Field mustard	plasma membrane	46.03	46.12

Protein Annotations

Gene3D:1.20.1740.10	MapMan:24.2.3.5.1	InterPro:AA/rel_permease1	EnsemblPlantsGene:Bra038217	EnsemblPlants:Bra038217.1	EnsemblPlants:Bra038217.1-P
GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015171	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	UniProt:M4FAV2
PFAM:PF13520	PIRSF:PIRSF006060	PANTHER:PTHR11785	PANTHER:PTHR11785:SF338	TMHMM:TMhelix	UniParc:UPI0002544C9D
SEG:seg	:	:	:	:	:

Description

AT3G19553 (E=5e-223) | amino acid permease family protein

Coordinates

chrA01:+:21539692..21541347

Molecular Weight (calculated)

52874.2 Da

IEP (calculated)

5.474

GRAVY (calculated)

0.527

Length

478 amino acids

Sequence
(BLAST)

001: MGEEIIPNDE NSAKTKPSPK LTLLPLVFLI FYEVSGGPFG VEDSVKSGGG PLLALLGFLI FPLIWSIPEA LVTAELATSF PENGGYVVWI SSAFGPFWGF
101: QEGFWKWFSG VMDNALYPVL FLDYLKHSFP VLNHAAARVP ALLVLTFALT YLNYRGLHIV GFSAVLLAVF SLCPFVVMAL LAVPRISPKR WLFVDFKKVN
201: WRGYFNTMFW NLNYWDKAST LAGEVESPGK TFPKALFGAV LLVMGSYLIP LMAGTGALSE SASGEWSDGY FAEVGMLIGG VWLKGWIQAA AAMSNLGLFE
301: AEMSSDAFQL LGMSEMGMLP AFFAQRSKYG TPTISILCSA TGVIFLSWMS FQEIIEFLNF LYALGMLLEF AAFVKLRIKK PDLNRPYRVP LNTFGTLMLC
401: LPPSLLLILV MVLATVKTFF VSGVIIVVGF CLHPFLKLVK EKRWARFIPE ETRPVLEVPS ESQLDEEHGD ESSASLLP

Best Arabidopsis Sequence Match ( AT3G19553.1 )
(BLAST)

001: MGEEETIVND ENSSKPKPSP KLTLLPLVFL IFYEVSGGPF GVEDSVKSGG GPLLALLGFL IFPLIWSIPE ALVTAELATS FPENGGYVVW ISSAFGPFWG
101: FQEGFWKWFS GVMDNALYPV LFLDYLKHSF PVLDHVAARV PALLVITFSL TYLNYRGLHI VGFSAVVLAV FSLCPFVVMA LLAVPNIRPK RWLFVDTQKI
201: NWRGYFNTMF WNLNYWDKAS TLAGEVDRPG KTFPKALFGA VLLVMGSYLI PLMAGTGALS SSTSGEWSDG YFAEVGMLIG GVWLKGWIQA AAAMSNLGLF
301: EAEMSSDAFQ LLGMSEIGML PAFFAQRSKY GTPTISILCS ATGVIFLSWM SFQEIIEFLN FLYALGMLLE FAAFVKLRIK KPDLHRPYRV PLNTFGVSML
401: CLPPSLLVIL VMVLAAPKTF LISGVIIVLG FCLYPFLTLV KEKQWARFIP EETRPVSGVS SESQLDEEHG DESAASLLP

Arabidopsis Description

PUT5 [Source:UniProtKB/TrEMBL;Acc:A0A178VGC5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.